Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_749.g13366 Utricularia gibba HOM05D001765 ORTHO05D005876 9.3e-81 304.3 162 100.0
MSTRG.21776 Avicennia marina HOM05D001765 ORTHO05D005876 5.3e-68 261.9 153 90.2
Cc03_g00980 Coffea canephora HOM05D001765 ORTHO05D005876 1.5e-67 260.4 149 91.3
Oeu001465.1 Olea europaea HOM05D001765 ORTHO05D005876 5.9e-67 258.5 160 85.6
Oeu063485.1 Olea europaea HOM05D001765 ORTHO05D005876 6.5e-66 255.0 159 87.4
Peaxi162Scf00065g00002 Petunia axillaris HOM05D001765 ORTHO05D005876 2.1e-64 250.0 155 87.1
SGA_v2.0_scaffold119G32663 Striga asiatica HOM05D001765 ORTHO05D005876 6.1e-64 248.4 160 85.0
Dinv44303 Davidia involucrata HOM05D001765 ORTHO05D005876 7.9e-64 248.1 154 84.4
Nitab4.5_0004323g0040 Nicotiana tabacum HOM05D001765 ORTHO05D005876 1.0e-63 247.7 152 86.2
Nitab4.5_0000456g0120 Nicotiana tabacum HOM05D001765 ORTHO05D005876 1.4e-63 247.3 152 86.2
CDE12G0657 Ceratophyllum demersum HOM05D001765 ORTHO05D005876 3.0e-63 246.1 160 83.8
Lj6P689T37 Lonicera japonica HOM05D001765 ORTHO05D005876 3.9e-63 245.7 153 86.9
Nitab4.5_0000276g0120 Nicotiana tabacum HOM05D001765 ORTHO05D005876 3.9e-63 245.7 152 85.5
CAN.G874.72 Capsicum annuum HOM05D001765 ORTHO05D005876 8.8e-63 244.6 151 86.8
Nitab4.5_0010629g0030 Nicotiana tabacum HOM05D001765 ORTHO05D005876 8.8e-63 244.6 148 86.5
CSS0034555 Camellia sinensis var. sinensis HOM05D001765 ORTHO05D005876 2.0e-62 243.4 149 87.2
CSS0002630 Camellia sinensis var. sinensis HOM05D001765 ORTHO05D005876 3.3e-62 242.7 158 82.9
Actinidia40362 Actinidia chinensis HOM05D001765 ORTHO05D005876 4.4e-62 242.3 153 85.0
Migut.N00048 Erythranthe guttata HOM05D001765 ORTHO05D005876 1.3e-61 240.7 149 85.2
Solyc01g060030.3 Solanum lycopersicum HOM05D001765 ORTHO05D005876 2.2e-61 240.0 158 83.5
Sopen01g026230 Solanum pennellii HOM05D001765 ORTHO05D005876 2.2e-61 240.0 158 83.5
Hma1.2p1_0078F.1_g040010 Hydrangea macrophylla HOM05D001765 ORTHO05D005876 8.2e-61 238.0 145 84.8
Hma1.2p1_0013F.1_g008730 Hydrangea macrophylla HOM05D001765 ORTHO05D005876 1.1e-60 237.7 154 81.8
DCAR_002506 Daucus carota HOM05D001765 ORTHO05D005876 2.4e-60 236.5 159 84.3
TWI73G0761 Tripterygium wilfordii HOM05D001765 ORTHO05D005876 6.9e-60 235.0 155 80.6
CiPaw.02G075900 Carya illinoinensis HOM05D001765 ORTHO05D005876 1.5e-59 233.8 150 85.3
Nn3g21679 Nelumbo nucifera HOM05D001765 ORTHO05D005876 1.5e-59 233.8 161 80.7
ECA246G2338 Erigeron canadensis HOM05D001765 ORTHO05D005876 2.0e-59 233.4 161 80.1
Lsat_1_v5_gn_6_116901 Lactuca sativa HOM05D001765 ORTHO05D005876 2.0e-59 233.4 157 80.3
Nn4g25612 Nelumbo nucifera HOM05D001765 ORTHO05D005876 2.0e-59 233.4 146 87.0
QL06p011625 Quercus lobata HOM05D001765 ORTHO05D005876 2.6e-59 233.0 148 84.5
MD13G1156300 Malus domestica HOM05D001765 ORTHO05D005876 3.4e-59 232.6 150 84.0
TWI09G0718 Tripterygium wilfordii HOM05D001765 ORTHO05D005876 3.4e-59 232.6 157 79.0
Prupe.1G073200 Prunus persica HOM05D001765 ORTHO05D005876 4.5e-59 232.3 147 85.0
Ciclev10005673m.g Citrus clementina HOM05D001765 ORTHO05D005876 7.7e-59 231.5 150 84.0
MD16G1157200 Malus domestica HOM05D001765 ORTHO05D005876 7.7e-59 231.5 161 80.1
Prupe.1G122100 Prunus persica HOM05D001765 ORTHO05D005876 7.7e-59 231.5 150 84.7
TAR365G0409 Trochodendron aralioides HOM05D001765 ORTHO05D005876 7.7e-59 231.5 148 83.8
ATR0706G059 Amborella trichopoda HOM05D001765 ORTHO05D005876 1.3e-58 230.7 151 81.5
Gohir.A09G065500 Gossypium hirsutum HOM05D001765 ORTHO05D005876 1.3e-58 230.7 145 87.6
Gorai.006G079200 Gossypium raimondii HOM05D001765 ORTHO05D005876 1.7e-58 230.3 145 87.6
MBI19_g07244_MAGBIO Magnolia biondii HOM05D001765 ORTHO05D005876 1.7e-58 230.3 146 86.3
TAR633G2429 Trochodendron aralioides HOM05D001765 ORTHO05D005876 1.7e-58 230.3 148 83.8
Gohir.D09G064400 Gossypium hirsutum HOM05D001765 ORTHO05D005876 2.2e-58 229.9 145 87.6
HanXRQChr05g0145931 Helianthus annuus HOM05D001765 ORTHO05D005876 2.9e-58 229.6 145 85.5
Rhsim04G0234200 Rhododendron simsii HOM05D001765 ORTHO05D005876 3.8e-58 229.2 145 84.8
Thecc.04G297600 Theobroma cacao HOM05D001765 ORTHO05D005876 3.8e-58 229.2 149 85.2
FvH4_4g19461 Fragaria vesca HOM05D001765 ORTHO05D005876 5.0e-58 228.8 152 83.6
vmacro08062 Vaccinium macrocarpon HOM05D001765 ORTHO05D005876 5.0e-58 228.8 151 84.1
Aqoxy1G02157 Aquilegia oxysepala HOM05D001765 ORTHO05D005876 6.5e-58 228.4 156 80.8
SEGI_21194 Sequoiadendron giganteum HOM05D001765 ORTHO05D005876 8.5e-58 228.0 146 83.6
SEGI_31674 Sequoiadendron giganteum HOM05D001765 ORTHO05D005876 8.5e-58 228.0 146 83.6
Atru.chr4.3029 Acer truncatum HOM05D001765 ORTHO05D005876 1.1e-57 227.6 148 80.4
CANSAT78G1829 Cannabis sativa HOM05D001765 ORTHO05D005876 1.1e-57 227.6 150 82.7
ClCG06G004640 Citrullus lanatus HOM05D001765 ORTHO05D005876 1.4e-57 227.3 150 83.3
Cpa.g.sc9.87 Carica papaya HOM05D001765 ORTHO05D005876 1.9e-57 226.9 160 79.4
Haze_01276 Corylus avellana HOM05D001765 ORTHO05D005876 1.9e-57 226.9 151 83.4
Haze_17391 Corylus avellana HOM05D001765 ORTHO05D005876 1.9e-57 226.9 151 83.4
Sc13g0006420 Simmondsia chinensis HOM05D001765 ORTHO05D005876 2.5e-57 226.5 161 78.9
FAN07G0091 Fragaria x ananassa HOM05D001765 ORTHO05D005876 3.2e-57 226.1 152 82.2
CiPaw.01G139800 Carya illinoinensis HOM05D001765 ORTHO05D005876 4.2e-57 225.7 161 78.9
PGR031G3587 Punica granatum HOM05D001765 ORTHO05D005876 4.2e-57 225.7 147 80.3
Duzib052G0074 Durio zibethinus HOM05D001765 ORTHO05D005876 5.5e-57 225.3 149 84.6
Manes.03G202700 Manihot esculenta HOM05D001765 ORTHO05D005876 5.5e-57 225.3 149 80.5
EL10Ac4g08905 Beta vulgaris HOM05D001765 ORTHO05D005876 9.4e-57 224.6 162 77.8
Glyma.07G241300 Glycine max HOM05D001765 ORTHO05D005876 9.4e-57 224.6 151 80.1
Potri.010G142400 Populus trichocarpa HOM05D001765 ORTHO05D005876 9.4e-57 224.6 145 82.1
VMungo0647G0513 Vigna mungo HOM05D000091 ORTHO05D005533 9.4e-57 224.6 142 83.8
Gorai.011G199400 Gossypium raimondii HOM05D001765 ORTHO05D005876 1.6e-56 223.8 145 85.5
Sabra08G0081000 Salix brachista HOM05D001765 ORTHO05D005876 1.6e-56 223.8 145 81.4
Duzib151G0385 Durio zibethinus HOM05D001765 ORTHO05D005876 2.7e-56 223.0 145 84.8
Ca_21450_v3 Cicer arietinum L. HOM05D001765 ORTHO05D005876 3.6e-56 222.6 160 76.9
Eucgr.A00351 Eucalyptus grandis HOM05D001765 ORTHO05D005876 3.6e-56 222.6 158 75.3
Aqoxy5G01535 Aquilegia oxysepala HOM05D001765 ORTHO05D005876 4.7e-56 222.2 144 84.0
AUR62037504 Chenopodium quinoa HOM05D001765 ORTHO05D005876 4.7e-56 222.2 150 82.7
Glyma.17G032500 Glycine max HOM05D001765 ORTHO05D005876 4.7e-56 222.2 151 79.5
THA.LOC104802705 Tarenaya hassleriana HOM05D001765 ORTHO05D005876 4.7e-56 222.2 153 80.4
Gohir.A10G171300 Gossypium hirsutum HOM05D001765 ORTHO05D005876 6.1e-56 221.9 145 84.8
Lalb_Chr13g0298421 Lupinus albus HOM05D001765 ORTHO05D005876 6.1e-56 221.9 152 78.9
Ah.04g162900 Amaranthus hybridus HOM05D001765 ORTHO05D005876 1.0e-55 221.1 158 79.1
Gohir.D10G178400 Gossypium hirsutum HOM05D001765 ORTHO05D005876 1.4e-55 220.7 145 84.8
Potri.008G107100 Populus trichocarpa HOM05D001765 ORTHO05D005876 1.8e-55 220.3 145 81.4
Sed0022335 Sechium edule HOM05D001765 ORTHO05D005876 1.8e-55 220.3 147 80.3
COL.COLO4_34649 Corchorus olitorius HOM05D001765 ORTHO05D005123 2.3e-55 219.9 163 78.5
TPR.G16856 Trifolium pratense HOM05D001765 ORTHO05D005876 2.3e-55 219.9 143 81.8
Sabra10G0110100 Salix brachista HOM05D001765 ORTHO05D005876 3.0e-55 219.5 145 80.7
CDE01G0626 Ceratophyllum demersum HOM05D001765 ORTHO05D005876 3.9e-55 219.2 160 76.9
VMungo1215G2482 Vigna mungo HOM05D001765 ORTHO05D005876 5.2e-55 218.8 158 75.3
COL.COLO4_11257 Corchorus olitorius HOM05D001765 ORTHO05D005876 6.7e-55 218.4 162 80.2
Phvul.008G245800 Phaseolus vulgaris HOM05D001765 ORTHO05D005876 1.1e-54 217.6 144 81.2
Phvul.009G074533 Phaseolus vulgaris HOM05D001765 ORTHO05D005876 1.1e-54 217.6 144 81.2
PSO210G5285 Papaver somniferum HOM05D001765 ORTHO05D005876 1.5e-54 217.2 145 82.1
Lalb_Chr07g0182091 Lupinus albus HOM05D001765 ORTHO05D005876 2.0e-54 216.9 143 79.7
THA.LOC104818892 Tarenaya hassleriana HOM05D001765 ORTHO05D005876 4.4e-54 215.7 151 78.8
Phvul.003G112500 Phaseolus vulgaris HOM05D001765 ORTHO05D005876 2.8e-53 213.0 157 76.4
PSO761G0153 Papaver somniferum HOM05D001765 ORTHO05D005876 4.8e-53 212.2 145 80.0
AT5G49400 Arabidopsis thaliana HOM05D001765 ORTHO05D005876 6.3e-53 211.8 149 81.2
BolC7t44518H Brassica oleracea HOM05D001765 ORTHO05D005876 6.3e-53 211.8 153 79.1
Aqoxy5G02976 Aquilegia oxysepala HOM05D001765 ORTHO05D005876 1.1e-52 211.1 144 81.2
arahy.Tifrunner.gnm1.ann1.03CYAA Arachis hypogaea HOM05D001765 ORTHO05D005876 1.1e-52 211.1 133 84.2
A06p38370 Brassica napus HOM05D001765 ORTHO05D005876 1.4e-52 210.7 149 81.2
BraA06t26751Z Brassica rapa HOM05D001765 ORTHO05D005876 1.4e-52 210.7 149 81.2
AUR62004747 Chenopodium quinoa HOM05D001765 ORTHO05D005876 1.8e-52 210.3 139 84.9
Ciclev10016311m.g Citrus clementina HOM05D001765 ORTHO05D005876 1.8e-52 210.3 132 86.4
CsaV3_2G015100 Cucumis sativus L. HOM05D001765 ORTHO05D005876 1.8e-52 210.3 135 86.7
RcHm_v2.0_Chr4g0424571 Rosa chinensis HOM05D001765 ORTHO05D005876 2.4e-52 209.9 133 87.2
Aa31LG11G7990 Aethionema arabicum HOM05D001765 ORTHO05D005876 3.1e-52 209.5 158 74.7
BcaNung02601 Brassica carinata HOM05D001765 ORTHO05D005876 3.1e-52 209.5 153 78.4
C07p39890 Brassica napus HOM05D001765 ORTHO05D005876 3.1e-52 209.5 153 78.4
MELO3C023334.2 Cucumis melo HOM05D001765 ORTHO05D005876 3.1e-52 209.5 134 86.6
Thhalv10004753m.g Eutrema salsugineum HOM05D001765 ORTHO05D005876 3.1e-52 209.5 146 82.2
BcaC06g30699 Brassica carinata HOM05D001765 ORTHO05D005876 5.3e-52 208.8 153 78.4
Carub.0008s0928 Capsella rubella HOM05D001765 ORTHO05D005876 5.3e-52 208.8 150 79.3
Sp2g19740 Schrenkiella parvula HOM05D001765 ORTHO05D005876 7.0e-52 208.4 148 80.4
SpUn0021_0110 Schrenkiella parvula HOM05D001765 ORTHO05D005876 7.0e-52 208.4 148 80.4
AL8G23110 Arabidopsis lyrata HOM05D001765 ORTHO05D005876 1.6e-51 207.2 149 79.9
BcaC03g17719 Brassica carinata HOM05D001765 ORTHO05D005876 2.6e-51 206.5 152 78.9
C02p57300 Brassica napus HOM05D001765 ORTHO05D003527 2.6e-51 206.5 152 78.9
BolC2t11799H Brassica oleracea HOM05D001765 ORTHO05D003527 2.6e-51 206.5 152 78.9
Zm00001eb328920 Zea mays HOM05D001765 ORTHO05D005876 3.5e-51 206.1 145 78.6
Zm00001eb109890 Zea mays HOM05D001765 ORTHO05D005876 4.5e-51 205.7 145 77.9
CARHR182130 Cardamine hirsuta HOM05D001765 ORTHO05D005876 1.3e-50 204.1 155 77.4
Psat4g024600 Pisum sativum HOM05D001765 ORTHO05D005876 6.5e-50 201.8 136 79.4
A02p38130 Brassica napus HOM05D001765 ORTHO05D003527 1.1e-49 201.1 157 75.8
Mapoly0023s0038 Marchantia polymorpha HOM05D001765 ORTHO05D005876 5.5e-49 198.7 162 74.1
Os11g0199600 Oryza sativa ssp. japonica HOM05D001765 ORTHO05D005876 7.2e-49 198.4 147 77.6
Sed0021764 Sechium edule HOM05D001765 ORTHO05D005876 9.4e-49 198.0 131 82.4
Lj4g0023600 Lotus japonicus HOM05D001765 ORTHO05D005876 2.7e-48 196.4 136 79.4
Pp3c14_13970 Physcomitrium patens HOM05D001765 ORTHO05D005876 4.7e-48 195.7 163 72.4
BraA02t08788Z Brassica rapa HOM05D001765 ORTHO05D005876 8.8e-47 191.4 153 76.5
AagrBONN_evm.TU.Sc2ySwM_362.810 Anthoceros agrestis HOM05D001765 ORTHO05D005876 1.3e-45 187.6 159 69.2
Nitab4.5_0004323g0070 Nicotiana tabacum HOM05D001765 ORTHO05D005876 2.8e-45 186.4 114 87.7
Manes.15G005450 Manihot esculenta HOM05D001765 ORTHO05D005876 2.4e-44 183.3 137 70.8
BcaB07g34154 Brassica carinata HOM05D001765 ORTHO05D005876 1.0e-42 177.9 149 72.5
Mapoly0171s0012 Marchantia polymorpha HOM05D001765 ORTHO05D005876 1.0e-42 177.9 163 65.0
Pp3c14_17690 Physcomitrium patens HOM05D001765 ORTHO05D005876 2.7e-40 169.9 129 71.3
AagrBONN_evm.TU.Sc2ySwM_228.5656 Anthoceros agrestis HOM05D001765 ORTHO05D005876 8.3e-37 158.3 119 76.5
MBI19_g17409_MAGBIO Magnolia biondii HOM05D001765 ORTHO05D005876 1.5e-33 147.5 146 64.4
CBR_g53494 Chara braunii HOM05D000188 ORTHO05D005876 4.2e-33 146.0 136 64.7
Zm00001eb091100 Zea mays HOM05D001765 ORTHO05D005876 1.2e-32 144.4 130 64.6
Zm00001eb276930 Zea mays HOM05D001765 ORTHO05D005876 3.6e-32 142.9 111 73.9
SMO340G0272 Selaginella moellendorffii HOM05D001765 ORTHO05D005876 6.1e-32 142.1 113 69.9
CAN.G201.7 Capsicum annuum HOM05D001765 ORTHO05D005876 5.9e-27 125.6 158 55.1
SEGI_08255 Sequoiadendron giganteum HOM05D001765 ORTHO05D005876 1.7e-26 124.0 99 67.7
GSVIVG01035017001 Vitis vinifera HOM05D001765 ORTHO05D005876 1.7e-26 124.0 87 83.9
Lsat_1_v5_gn_6_18261 Lactuca sativa HOM05D001765 ORTHO05D005876 1.1e-25 121.3 147 53.1
ATR1159G054 Amborella trichopoda HOM05D001765 ORTHO05D005876 1.5e-25 120.9 85 65.9
HanXRQChr13g0395311 Helianthus annuus HOM05D001765 ORTHO05D005876 4.7e-24 115.9 152 51.3
ECA233G0063 Erigeron canadensis HOM05D001765 ORTHO05D005876 1.2e-22 111.3 99 65.7
Zm00001eb408400 Zea mays HOM05D001765 ORTHO05D005876 1.3e-21 107.8 83 75.9
CAN.G197.3 Capsicum annuum HOM05D001765 ORTHO05D005876 3.5e-19 99.8 75 76.0
Medtr1g032030 Medicago truncatula HOM05D001765 ORTHO05D005876 4.6e-19 99.4 69 82.6
Medtr1g032370 Medicago truncatula HOM05D001765 ORTHO05D005876 4.6e-19 99.4 69 82.6
ATR1159G071 Amborella trichopoda HOM05D001765 ORTHO05D005876 1.7e-13 80.9 67 79.1
ATR1159G066 Amborella trichopoda HOM05D001765 ORTHO05D005876 1.4e-12 77.8 65 76.9
Dinv15195 Davidia involucrata HOM05D002174 ORTHO05D005447 3.0e-10 70.1 50 74.0
Cre12.g529200 Chlamydomonas reinhardtii HOM05D001765 ORTHO05D005876 1.2e-06 58.2 40 57.5


User provided reference genes

Program Settings