Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_749.g13364 Utricularia gibba HOM05D005742 ORTHO05D001888 4.7e-109 397.9 203 100.0
unitig_22.g6961 Utricularia gibba HOM05D005742 ORTHO05D001888 1.6e-48 196.8 161 63.4
Migut.N00045 Erythranthe guttata HOM05D005742 ORTHO05D001888 4.5e-27 125.6 201 39.3
MSTRG.21772 Avicennia marina HOM05D005742 ORTHO05D001888 3.8e-26 122.5 145 45.5
MSTRG.24819 Avicennia marina HOM05D005742 ORTHO05D001888 2.5e-25 119.8 153 43.1
SGA_v2.0_scaffold473G52104 Striga asiatica HOM05D005742 ORTHO05D001888 1.6e-24 117.1 151 45.0
unitig_0.g2583 Utricularia gibba HOM05D005742 ORTHO05D001888 4.1e-20 102.4 142 40.1
Sabra14G0088400 Salix brachista HOM05D008182 ORTHO05D001888 6.9e-20 101.7 145 40.0
DCAR_027000 Daucus carota HOM05D005742 ORTHO05D001888 3.4e-19 99.4 161 37.3
Hma1.2p1_0013F.1_g008650 Hydrangea macrophylla HOM05D005742 ORTHO05D001888 3.4e-19 99.4 141 41.8
Oeu032017.1 Olea europaea HOM05D005742 ORTHO05D001888 5.9e-19 98.6 139 41.0
Rhsim02G0004500 Rhododendron simsii HOM05D005742 ORTHO05D001888 1.7e-18 97.1 171 37.4
Migut.G00051 Erythranthe guttata HOM05D005742 ORTHO05D001888 2.9e-18 96.3 142 39.4
Oeu003757.1 Olea europaea HOM05D005742 ORTHO05D001888 3.8e-18 95.9 139 40.3
Dinv44293 Davidia involucrata HOM05D005742 ORTHO05D001888 5.0e-18 95.5 142 39.4
CSS0018184 Camellia sinensis var. sinensis HOM05D005742 ORTHO05D001888 8.5e-18 94.7 143 38.5
CSS0026509 Camellia sinensis var. sinensis HOM05D005742 ORTHO05D001888 8.5e-18 94.7 143 38.5
Potri.014G119200 Populus trichocarpa HOM05D008182 ORTHO05D001888 4.2e-17 92.4 156 33.3
MD03G1299200 Malus domestica HOM05D005742 ORTHO05D001888 9.4e-17 91.3 142 38.7
Nitab4.5_0000169g0180 Nicotiana tabacum HOM05D005742 ORTHO05D001888 9.4e-17 91.3 188 32.4
vmacro15186 Vaccinium macrocarpon HOM05D005742 ORTHO05D001888 9.4e-17 91.3 149 39.6
Nitab4.5_0002218g0040 Nicotiana tabacum HOM05D005742 ORTHO05D001888 1.6e-16 90.5 154 35.7
Actinidia18454 Actinidia chinensis HOM05D005742 ORTHO05D001888 3.6e-16 89.4 142 35.9
Actinidia40376 Actinidia chinensis HOM05D005742 ORTHO05D001888 3.6e-16 89.4 142 35.9
CAN.G244.7 Capsicum annuum HOM05D005742 ORTHO05D001888 6.1e-16 88.6 161 32.3
Cpa.g.sc9.68 Carica papaya HOM05D005742 ORTHO05D001888 6.1e-16 88.6 142 31.7
Lj6P690T34 Lonicera japonica HOM05D005742 ORTHO05D001888 6.1e-16 88.6 143 38.5
SalBow8G0437 Salvia bowleyana HOM05D005742 ORTHO05D001888 6.1e-16 88.6 142 32.4
SalBow8G4915 Salvia bowleyana HOM05D005742 ORTHO05D001888 6.1e-16 88.6 142 32.4
Eucgr.H01005 Eucalyptus grandis HOM05D005742 ORTHO05D001888 7.9e-16 88.2 138 37.0
Rhsim04G0235100 Rhododendron simsii HOM05D005742 ORTHO05D001888 1.0e-15 87.8 165 36.4
PGSC0003DMG400021845 Solanum tuberosum HOM05D005742 ORTHO05D001888 1.4e-15 87.4 154 34.4
TAR362G0759 Trochodendron aralioides HOM05D005742 ORTHO05D001888 2.3e-15 86.7 142 36.6
MSTRG.3861 Avicennia marina HOM05D005742 ORTHO05D001888 3.0e-15 86.3 146 32.9
Solyc01g059940.2 Solanum lycopersicum HOM05D005742 ORTHO05D001888 3.0e-15 86.3 154 32.5
CARHR081260 Cardamine hirsuta HOM05D005742 ORTHO05D001888 3.9e-15 85.9 144 36.8
Sopen01g026080 Solanum pennellii HOM05D005742 ORTHO05D001888 3.9e-15 85.9 154 32.5
vmacro08056 Vaccinium macrocarpon HOM05D001258 ORTHO05D000158 3.9e-15 85.9 156 37.2
QL06p011856 Quercus lobata HOM05D005742 ORTHO05D001888 5.1e-15 85.5 144 35.4
Potri.002G194800 Populus trichocarpa HOM05D008182 ORTHO05D001888 6.7e-15 85.1 145 33.1
Duzib151G0239 Durio zibethinus HOM05D005742 ORTHO05D001888 1.5e-14 84.0 125 36.8
Potri.002G194900 Populus trichocarpa HOM05D008182 ORTHO05D001888 1.5e-14 84.0 145 32.4
Peaxi162Scf00228g00024 Petunia axillaris HOM05D005742 ORTHO05D001888 2.0e-14 83.6 142 32.4
Cc03_g00920 Coffea canephora HOM05D005742 ORTHO05D001888 3.3e-14 82.8 147 32.7
Dinv15186 Davidia involucrata HOM05D001340 ORTHO05D002318 4.3e-14 82.4 184 32.1
BcaC09g47911 Brassica carinata HOM05D005742 ORTHO05D001888 5.7e-14 82.0 141 36.2
BolC1t05594H Brassica oleracea HOM05D005742 ORTHO05D001888 5.7e-14 82.0 141 36.2
AT3G36659 Arabidopsis thaliana HOM05D005742 ORTHO05D001888 7.4e-14 81.6 144 34.7
BNapus_Darmor_BZH_scaffold_118p00010 Brassica napus HOM05D005742 ORTHO05D001888 7.4e-14 81.6 144 35.4
BraA01t04423Z Brassica rapa HOM05D005742 ORTHO05D001888 7.4e-14 81.6 144 35.4
COL.COLO4_23220 Corchorus olitorius HOM05D008182 ORTHO05D001888 7.4e-14 81.6 178 33.1
THA.LOC104818886 Tarenaya hassleriana HOM05D005742 ORTHO05D001888 7.4e-14 81.6 141 34.8
TWI75G0476 Tripterygium wilfordii HOM05D008182 ORTHO05D001888 9.7e-14 81.3 146 32.9
AL3G17770 Arabidopsis lyrata HOM05D005742 ORTHO05D001888 1.3e-13 80.9 144 34.0
Carub.0003s0617 Capsella rubella HOM05D005742 ORTHO05D001888 1.3e-13 80.9 145 35.9
Thhalv10022426m.g Eutrema salsugineum HOM05D005742 ORTHO05D001888 1.3e-13 80.9 144 35.4
Phvul.006G117500 Phaseolus vulgaris HOM05D005742 ORTHO05D001888 1.3e-13 80.9 119 38.7
Actinidia15607 Actinidia chinensis HOM05D005742 ORTHO05D001888 1.7e-13 80.5 147 32.7
Sabra02G0161800 Salix brachista HOM05D008182 ORTHO05D001888 2.2e-13 80.1 145 30.3
Aa31LG5G17240 Aethionema arabicum HOM05D005742 ORTHO05D001888 2.8e-13 79.7 144 34.0
BcaC05g30549 Brassica carinata HOM05D005742 ORTHO05D001888 2.8e-13 79.7 141 36.2
CiPaw.02G075500 Carya illinoinensis HOM05D005742 ORTHO05D001888 2.8e-13 79.7 141 36.2
Sp3g05640 Schrenkiella parvula HOM05D005742 ORTHO05D001888 2.8e-13 79.7 144 34.7
Haze_01291 Corylus avellana HOM05D005742 ORTHO05D001888 4.8e-13 79.0 140 34.3
Cfa015324 Carpinus fangiana HOM05D005742 ORTHO05D001888 6.3e-13 78.6 140 34.3
Thecc.04G299300 Theobroma cacao HOM05D005742 ORTHO05D001888 6.3e-13 78.6 140 30.7
Duzib052G0264 Durio zibethinus HOM05D005742 ORTHO05D001888 8.2e-13 78.2 124 33.9
Glyma.09G036200 Glycine max HOM05D005742 ORTHO05D001888 8.2e-13 78.2 121 33.1
Ca_01851_v3 Cicer arietinum L. HOM05D005742 ORTHO05D001888 1.1e-12 77.8 149 30.9
Gohir.D02G058775 Gossypium hirsutum HOM05D005742 ORTHO05D001888 1.1e-12 77.8 149 31.5
Gorai.005G066500 Gossypium raimondii HOM05D005742 ORTHO05D001888 1.1e-12 77.8 149 31.5
TAR633G1530 Trochodendron aralioides HOM05D005742 ORTHO05D001888 1.1e-12 77.8 142 35.2
Duzib138G0624 Durio zibethinus HOM05D008182 ORTHO05D001888 1.4e-12 77.4 144 36.1
ATR0796G165 Amborella trichopoda HOM05D005742 ORTHO05D001888 1.8e-12 77.0 150 35.3
QL12p019526 Quercus lobata HOM05D005742 ORTHO05D001888 3.1e-12 76.3 125 35.2
Prupe.1G118800 Prunus persica HOM05D005742 ORTHO05D001888 4.1e-12 75.9 144 31.9
Ah.04g157100 Amaranthus hybridus HOM05D005742 ORTHO05D001888 5.3e-12 75.5 146 32.2
CANSAT78G0521 Cannabis sativa HOM05D005742 ORTHO05D001888 6.9e-12 75.1 144 32.6
MD16G1155100 Malus domestica HOM05D005742 ORTHO05D001888 2.0e-11 73.6 142 31.0
Duzib211G0330 Durio zibethinus HOM05D008182 ORTHO05D001888 2.6e-11 73.2 144 34.0
PGR083G2154 Punica granatum HOM05D008182 ORTHO05D001888 2.6e-11 73.2 147 34.0
THA.LOC104802706 Tarenaya hassleriana HOM05D005742 ORTHO05D001888 2.6e-11 73.2 138 33.3
Glyma.15G141100 Glycine max HOM05D005742 ORTHO05D001888 3.4e-11 72.8 123 33.3
Thecc.01G314800 Theobroma cacao HOM05D008182 ORTHO05D001888 3.4e-11 72.8 144 34.0
Gohir.A11G108700 Gossypium hirsutum HOM05D008182 ORTHO05D001888 4.5e-11 72.4 148 31.1
Glyma.10G012100 Glycine max HOM05D008489 ORTHO05D010677 7.7e-11 71.6 200 27.5
Gorai.007G122100 Gossypium raimondii HOM05D008182 ORTHO05D001888 7.7e-11 71.6 148 31.1
Lalb_Chr15g0089211 Lupinus albus HOM05D005742 ORTHO05D001888 7.7e-11 71.6 115 35.7
Lalb_Chr15g0089221 Lupinus albus HOM05D005742 ORTHO05D001888 7.7e-11 71.6 115 35.7
Gohir.A11G108900 Gossypium hirsutum HOM05D008182 ORTHO05D001888 1.0e-10 71.2 150 30.7
MBI18_g17308_MAGBIO Magnolia biondii HOM05D005742 ORTHO05D001888 1.0e-10 71.2 141 29.8
TWI09G1381 Tripterygium wilfordii HOM05D005742 ORTHO05D001888 1.0e-10 71.2 145 32.4
Gohir.A11G109000 Gossypium hirsutum HOM05D008182 ORTHO05D001888 1.3e-10 70.9 148 30.4
Gorai.004G050100 Gossypium raimondii HOM05D008182 ORTHO05D001888 1.3e-10 70.9 158 32.9
Manes.05G004700 Manihot esculenta HOM05D008182 ORTHO05D001888 1.7e-10 70.5 148 29.7
Psat1g160600 Pisum sativum HOM05D005742 ORTHO05D001888 1.7e-10 70.5 147 29.9
Gohir.D08G050500 Gossypium hirsutum HOM05D008182 ORTHO05D001888 2.2e-10 70.1 158 32.3
Gohir.D11G113300 Gossypium hirsutum HOM05D008182 ORTHO05D001888 2.2e-10 70.1 144 30.6
Gohir.D11G113500 Gossypium hirsutum HOM05D008182 ORTHO05D001888 2.2e-10 70.1 148 30.4
Gohir.A08G040400 Gossypium hirsutum HOM05D008182 ORTHO05D001888 2.9e-10 69.7 179 30.2
Nn4g25584 Nelumbo nucifera HOM05D005742 ORTHO05D001888 3.8e-10 69.3 144 31.2
arahy.Tifrunner.gnm1.ann1.X5UH65 Arachis hypogaea HOM05D005742 ORTHO05D001888 5.0e-10 68.9 117 35.0
Eucgr.H02532 Eucalyptus grandis HOM05D008070 ORTHO05D001888 6.5e-10 68.6 163 29.4
FAN12G0951 Fragaria x ananassa HOM05D001258 ORTHO05D000158 6.5e-10 68.6 145 31.7
Sabra14G0088500 Salix brachista HOM05D008182 ORTHO05D001888 6.5e-10 68.6 145 29.7
TWI53G1179 Tripterygium wilfordii HOM05D005742 ORTHO05D001888 6.5e-10 68.6 154 32.5
VMungo0540G0961 Vigna mungo HOM05D005742 ORTHO05D001888 6.5e-10 68.6 133 30.8
Potri.002G195000 Populus trichocarpa HOM05D008182 ORTHO05D001888 8.5e-10 68.2 145 29.0
CDE06G2294 Ceratophyllum demersum HOM05D005742 ORTHO05D001888 1.1e-09 67.8 169 26.0
Gohir.D11G113400 Gossypium hirsutum HOM05D008182 ORTHO05D001888 1.1e-09 67.8 165 27.3
VMungo0540G2083 Vigna mungo HOM05D005742 ORTHO05D001888 1.1e-09 67.8 115 32.2
DCAR_023352 Daucus carota HOM05D005742 ORTHO05D001888 1.4e-09 67.4 202 31.2
Potri.014G119400 Populus trichocarpa HOM05D008182 ORTHO05D001888 1.4e-09 67.4 145 29.7
FvH4_4g19570 Fragaria vesca HOM05D005742 ORTHO05D001888 1.9e-09 67.0 145 31.7
Gorai.007G122000 Gossypium raimondii HOM05D008182 ORTHO05D001888 2.5e-09 66.6 190 26.8
CDE02G2547 Ceratophyllum demersum HOM05D005742 ORTHO05D001888 3.2e-09 66.2 143 32.9
Gohir.A02G054001 Gossypium hirsutum HOM05D005742 ORTHO05D001888 3.2e-09 66.2 133 28.6
Manes.01G228700 Manihot esculenta HOM05D008182 ORTHO05D001888 3.2e-09 66.2 149 26.2
CDE07G0112 Ceratophyllum demersum HOM05D005742 ORTHO05D001888 4.2e-09 65.9 156 26.9
ClCG10G011490 Citrullus lanatus HOM05D005742 ORTHO05D001888 4.2e-09 65.9 146 30.8
CsaV3_4G001290 Cucumis sativus L. HOM05D005742 ORTHO05D001888 4.2e-09 65.9 147 32.0
Gorai.007G121900 Gossypium raimondii HOM05D008182 ORTHO05D001888 9.4e-09 64.7 144 29.9
SGA_v2.0_scaffold104G30095 Striga asiatica HOM05D005742 ORTHO05D001888 9.4e-09 64.7 116 38.8
Atru.chr4.3013 Acer truncatum HOM05D005742 ORTHO05D001888 1.2e-08 64.3 165 30.3
Hma1.2p1_0129F.1_g060190 Hydrangea macrophylla HOM05D005742 ORTHO05D001888 1.2e-08 64.3 84 44.0
HPP92_027565 Vanilla planifolia HOM05D005742 ORTHO05D001888 1.2e-08 64.3 153 33.3
Lalb_Chr15g0089231 Lupinus albus HOM05D005742 ORTHO05D001888 1.6e-08 63.9 115 32.2
CDE04G3015 Ceratophyllum demersum HOM05D004884 ORTHO05D005873 2.1e-08 63.5 151 28.5
Ciclev10007183m.g Citrus clementina HOM05D005742 ORTHO05D001888 2.1e-08 63.5 205 25.4
MELO3C017910.2 Cucumis melo HOM05D005742 ORTHO05D001888 2.1e-08 63.5 143 30.1
CDE06G1547 Ceratophyllum demersum HOM05D004884 ORTHO05D005873 2.7e-08 63.2 161 27.3
Medtr2g034220 Medicago truncatula HOM05D005742 ORTHO05D001888 2.7e-08 63.2 148 27.0
Gohir.D09G222600 Gossypium hirsutum HOM05D008182 ORTHO05D001888 3.6e-08 62.8 147 29.9
Gorai.006G243800 Gossypium raimondii HOM05D008182 ORTHO05D001888 3.6e-08 62.8 147 29.9
Lalb_Chr18g0058731 Lupinus albus HOM05D005742 ORTHO05D001888 3.6e-08 62.8 127 29.9
Glyma.02G011500 Glycine max HOM05D008489 ORTHO05D010677 6.1e-08 62.0 150 27.3
Hma1.2p1_0293F.1_g116340 Hydrangea macrophylla HOM05D005742 ORTHO05D001888 6.1e-08 62.0 84 41.7
HPP92_017245 Vanilla planifolia HOM05D005742 ORTHO05D001888 6.1e-08 62.0 153 32.7
Gorai.006G243900 Gossypium raimondii HOM05D008182 ORTHO05D001888 7.9e-08 61.6 147 31.3
Lalb_Chr20g0120901 Lupinus albus HOM05D005742 ORTHO05D001888 7.9e-08 61.6 111 29.7
Gohir.A09G220400 Gossypium hirsutum HOM05D008182 ORTHO05D001888 1.0e-07 61.2 147 30.6
AUR62001403 Chenopodium quinoa HOM05D000036 ORTHO05D000095 1.4e-07 60.8 157 30.6
Gohir.A09G220433 Gossypium hirsutum HOM05D008182 ORTHO05D001888 1.8e-07 60.5 139 29.5
Hma1.2p1_0400F.1_g144500 Hydrangea macrophylla HOM05D005742 ORTHO05D001888 1.8e-07 60.5 78 44.9
COL.COLO4_34630 Corchorus olitorius HOM05D005742 ORTHO05D001888 2.3e-07 60.1 126 27.8
Gohir.D12G127800 Gossypium hirsutum HOM05D008182 ORTHO05D001888 2.3e-07 60.1 148 29.7
Gorai.008G138700 Gossypium raimondii HOM05D008182 ORTHO05D001888 2.3e-07 60.1 148 29.7
MBI10_g44381_MAGBIO Magnolia biondii HOM05D008070 ORTHO05D001888 2.3e-07 60.1 153 26.8
VMungo0720G2810 Vigna mungo HOM05D008489 ORTHO05D010677 3.0e-07 59.7 143 23.8
arahy.Tifrunner.gnm1.ann1.68BGXQ Arachis hypogaea HOM05D008489 ORTHO05D010677 5.1e-07 58.9 152 27.6
AUR62025614 Chenopodium quinoa HOM05D000036 ORTHO05D000095 5.1e-07 58.9 154 27.9
AUR62043502 Chenopodium quinoa HOM05D000036 ORTHO05D000095 5.1e-07 58.9 154 27.9
Carub.0003s0619 Capsella rubella HOM05D005742 ORTHO05D001888 8.8e-07 58.2 142 30.3
Gohir.A12G124000 Gossypium hirsutum HOM05D008182 ORTHO05D001888 1.1e-06 57.8 148 28.4
Manes.04G123800 Manihot esculenta HOM05D008182 ORTHO05D001888 1.1e-06 57.8 195 24.1
CDE06G2513 Ceratophyllum demersum HOM05D001445 ORTHO05D001261 1.5e-06 57.4 155 27.7
Hma1.2p1_0419F.1_g149380 Hydrangea macrophylla HOM05D005742 ORTHO05D001888 1.5e-06 57.4 84 39.3
TAR629G1731 Trochodendron aralioides HOM05D008070 ORTHO05D001888 2.0e-06 57.0 151 24.5
Duzib251G0841 Durio zibethinus HOM05D008070 ORTHO05D001888 2.6e-06 56.6 142 29.6
Manes.12G025200 Manihot esculenta HOM05D008070 ORTHO05D001888 2.6e-06 56.6 164 26.2
QL03p058723 Quercus lobata HOM05D010056 ORTHO05D001888 2.6e-06 56.6 154 27.9
SGA_v2.0_scaffold20G09209 Striga asiatica HOM05D014950 ORTHO05D020595 3.3e-06 56.2 120 29.2
arahy.Tifrunner.gnm1.ann1.27A6A2 Arachis hypogaea HOM05D008489 ORTHO05D010677 4.4e-06 55.8 152 27.0
Gohir.A11G108866 Gossypium hirsutum HOM05D008182 ORTHO05D001888 5.7e-06 55.5 140 27.9
Sopen03g023520 Solanum pennellii HOM05D000281 ORTHO05D000290 5.7e-06 55.5 180 27.2
Gohir.D09G222700 Gossypium hirsutum HOM05D008182 ORTHO05D001888 7.4e-06 55.1 203 26.6
Gorai.006G244000 Gossypium raimondii HOM05D008182 ORTHO05D001888 7.4e-06 55.1 203 26.6
Mapoly0176s0016 Marchantia polymorpha HOM05D000036 ORTHO05D000095 7.4e-06 55.1 161 23.6
Prupe.8G261300 Prunus persica HOM05D000281 ORTHO05D008643 7.4e-06 55.1 170 27.1
PGR031G3690 Punica granatum HOM05D005742 ORTHO05D001888 7.4e-06 55.1 141 27.7
THA.LOC104817455 Tarenaya hassleriana HOM05D005742 ORTHO05D001888 7.4e-06 55.1 145 27.6
A05p35090 Brassica napus HOM05D000036 ORTHO05D000095 9.7e-06 54.7 160 28.8
BraA05t22322Z Brassica rapa HOM05D000036 ORTHO05D000095 9.7e-06 54.7 160 28.8
CDE07G0552 Ceratophyllum demersum HOM05D001445 ORTHO05D003404 9.7e-06 54.7 103 33.0
ClCG08G017790 Citrullus lanatus HOM05D008070 ORTHO05D001888 9.7e-06 54.7 151 28.5
MELO3C005885.2 Cucumis melo HOM05D000036 ORTHO05D000095 9.7e-06 54.7 155 27.1
MELO3C010682.2 Cucumis melo HOM05D008070 ORTHO05D001888 9.7e-06 54.7 134 28.4
CsaV3_2G024840 Cucumis sativus L. HOM05D008070 ORTHO05D001888 9.7e-06 54.7 134 29.1
Gohir.A09G224750 Gossypium hirsutum HOM05D008182 ORTHO05D001888 9.7e-06 54.7 143 28.7


User provided reference genes

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