Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_749.g13356 Utricularia gibba HOM05D008359 ORTHO05D010300 1.5e-29 132.9 111 100.0
CiPaw.02G072800 Carya illinoinensis HOM05D008359 ORTHO05D010300 1.8e-09 66.2 88 63.6
Duzib212G0105 Durio zibethinus HOM05D008359 ORTHO05D010300 1.8e-09 66.2 81 72.8
SGA_v2.0_scaffold246G44799 Striga asiatica HOM05D008359 ORTHO05D010300 1.8e-09 66.2 39 84.6
MD16G1149800 Malus domestica HOM05D008359 ORTHO05D010300 8.8e-09 63.9 82 74.4
Migut.N00029 Erythranthe guttata HOM05D008359 ORTHO05D010300 1.1e-08 63.5 51 82.4
Sp1g34910 Schrenkiella parvula HOM05D008359 ORTHO05D010300 1.1e-08 63.5 85 64.7
MD13G1149500 Malus domestica HOM05D008359 ORTHO05D010300 3.3e-08 62.0 54 70.4
Haze_01345 Corylus avellana HOM05D008359 ORTHO05D010300 4.3e-08 61.6 33 87.9
A06p04780 Brassica napus HOM05D008359 ORTHO05D010300 7.4e-08 60.8 56 69.6
CARHR037590 Cardamine hirsuta HOM05D008359 ORTHO05D010300 7.4e-08 60.8 59 62.7
SGA_v2.0_scaffold227G43229 Striga asiatica HOM05D008359 ORTHO05D010300 7.4e-08 60.8 37 78.4
BcaB07g33802 Brassica carinata HOM05D008359 ORTHO05D010300 9.7e-08 60.5 33 90.9
FAN11G0909 Fragaria x ananassa HOM05D008359 ORTHO05D010300 9.7e-08 60.5 83 66.3
BcaC08g42993 Brassica carinata HOM05D008359 ORTHO05D010300 1.3e-07 60.1 58 62.1
C06p02350 Brassica napus HOM05D008359 ORTHO05D010300 1.3e-07 60.1 58 62.1
BolC6t35360H Brassica oleracea HOM05D008359 ORTHO05D010300 1.3e-07 60.1 58 62.1
Carub.0001s3705 Capsella rubella HOM05D008359 ORTHO05D010300 1.3e-07 60.1 37 78.4
AL1G54480 Arabidopsis lyrata HOM05D008359 ORTHO05D010300 1.7e-07 59.7 63 58.7
CANSAT78G0680 Cannabis sativa HOM05D008359 ORTHO05D010300 1.7e-07 59.7 31 90.3
HanXRQChr01g0022331 Helianthus annuus HOM05D008359 ORTHO05D010300 1.7e-07 59.7 83 71.1
AT1G47970 Arabidopsis thaliana HOM05D008359 ORTHO05D010300 2.2e-07 59.3 57 63.2
Thecc.04G305300 Theobroma cacao HOM05D008359 ORTHO05D010300 2.2e-07 59.3 60 68.3
FAN04G0049 Fragaria x ananassa HOM05D024256 ORTHO05D010300 2.8e-07 58.9 82 72.0
FAN12G0153 Fragaria x ananassa HOM05D008359 ORTHO05D010300 2.8e-07 58.9 82 72.0
BraA06t23682Z Brassica rapa HOM05D008359 ORTHO05D010300 4.8e-07 58.2 55 65.5
Manes.03G207300 Manihot esculenta HOM05D008359 ORTHO05D010300 6.3e-07 57.8 84 71.4
Aa31LG10G5820 Aethionema arabicum HOM05D000167 ORTHO05D000465 8.2e-07 57.4 32 87.5
CSS0040370 Camellia sinensis var. sinensis HOM05D008359 ORTHO05D010300 8.2e-07 57.4 85 63.5
FvH4_4g20460 Fragaria vesca HOM05D008359 ORTHO05D010300 8.2e-07 57.4 82 70.7
Cpa.g.sc9.19 Carica papaya HOM05D008359 ORTHO05D010300 1.1e-06 57.0 63 65.1
Nitab4.5_0000289g0010 Nicotiana tabacum HOM05D008359 ORTHO05D010300 1.1e-06 57.0 32 87.5
DCAR_030453 Daucus carota HOM05D008359 ORTHO05D010300 1.4e-06 56.6 86 55.8
Oeu044729.1 Olea europaea HOM05D008359 ORTHO05D010300 1.4e-06 56.6 51 78.4
Atru.chr4.3060 Acer truncatum HOM05D008359 ORTHO05D010300 1.8e-06 56.2 32 84.4
Prupe.1G113500 Prunus persica HOM05D008359 ORTHO05D010300 1.8e-06 56.2 51 74.5
Nn3g21784 Nelumbo nucifera HOM05D008359 ORTHO05D010300 2.4e-06 55.8 32 84.4
PGR031G3777 Punica granatum HOM05D008359 ORTHO05D010300 3.1e-06 55.5 29 89.7
Sabra10G0114500 Salix brachista HOM05D008359 ORTHO05D010300 3.1e-06 55.5 30 86.7
MBI19_g03271_MAGBIO Magnolia biondii HOM05D008359 ORTHO05D010300 4.1e-06 55.1 37 75.7
Nitab4.5_0004298g0050 Nicotiana tabacum HOM05D008359 ORTHO05D010300 4.1e-06 55.1 31 87.1
TAR633G1589 Trochodendron aralioides HOM05D008359 ORTHO05D010300 4.1e-06 55.1 37 81.1
Sp3g15360 Schrenkiella parvula HOM05D009524 ORTHO05D014763 5.3e-06 54.7 88 48.9
Lj3P834T33 Lonicera japonica HOM05D008359 ORTHO05D010300 6.9e-06 54.3 28 89.3
Potri.010G148400 Populus trichocarpa HOM05D035266 ORTHO05D010300 6.9e-06 54.3 58 63.8
RcHm_v2.0_Chr4g0425941 Rosa chinensis HOM05D008359 ORTHO05D010300 9.1e-06 53.9 33 75.8


User provided reference genes

Program Settings