Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_749.g13306 Utricularia gibba HOM05D004124 ORTHO05D004779 2.8e-124 448.7 250 100.0
MSTRG.500 Avicennia marina HOM05D004124 ORTHO05D004779 8.6e-89 330.9 239 66.5
CANSAT01G0376 Cannabis sativa HOM05D004124 ORTHO05D004779 7.3e-88 327.8 241 66.8
Cc11_g16980 Coffea canephora HOM05D004124 ORTHO05D004779 2.8e-87 325.9 242 66.9
arahy.Tifrunner.gnm1.ann1.JS6392 Arachis hypogaea HOM05D004124 ORTHO05D004779 1.8e-86 323.2 240 66.2
Potri.001G056000 Populus trichocarpa HOM05D004124 ORTHO05D004779 4.0e-86 322.0 241 67.6
COL.COLO4_20412 Corchorus olitorius HOM05D004124 ORTHO05D004779 5.2e-86 321.6 241 66.4
Dinv10949 Davidia involucrata HOM05D004124 ORTHO05D004779 6.9e-86 321.2 284 68.3
CiPaw.06G103200 Carya illinoinensis HOM05D004124 ORTHO05D004779 2.0e-85 319.7 234 68.4
Eucgr.H04636 Eucalyptus grandis HOM05D004124 ORTHO05D004779 2.6e-85 319.3 285 67.7
GSVIVG01010495001 Vitis vinifera HOM05D004124 ORTHO05D004779 2.6e-85 319.3 239 68.6
MSTRG.8009 Avicennia marina HOM05D004124 ORTHO05D004779 3.4e-85 318.9 241 67.2
Haze_12426 Corylus avellana HOM05D004124 ORTHO05D004779 3.4e-85 318.9 240 67.1
arahy.Tifrunner.gnm1.ann1.B7Q2TL Arachis hypogaea HOM05D004124 ORTHO05D004779 7.6e-85 317.8 251 63.3
Duzib251G0523 Durio zibethinus HOM05D004124 ORTHO05D004779 7.6e-85 317.8 286 67.1
Manes.12G010400 Manihot esculenta HOM05D004124 ORTHO05D004779 1.7e-84 316.6 239 65.3
QL03p052498 Quercus lobata HOM05D004124 ORTHO05D004779 2.2e-84 316.2 230 67.4
TWI18G0339 Tripterygium wilfordii HOM05D004124 ORTHO05D004779 2.2e-84 316.2 235 67.2
PGR102G1761 Punica granatum HOM05D004124 ORTHO05D004779 2.9e-84 315.8 238 66.0
Gohir.A04G140100 Gossypium hirsutum HOM05D004124 ORTHO05D004779 6.4e-84 314.7 241 65.1
Gorai.012G176300 Gossypium raimondii HOM05D004124 ORTHO05D004779 1.1e-83 313.9 241 65.1
MELO3C011859.2 Cucumis melo HOM05D004124 ORTHO05D004779 4.2e-83 312.0 235 66.0
CsaV3_5G030210 Cucumis sativus L. HOM05D004124 ORTHO05D004779 4.2e-83 312.0 235 66.0
VMungo1383G0738 Vigna mungo HOM05D004124 ORTHO05D004779 5.4e-83 311.6 241 64.7
Potri.003G172500 Populus trichocarpa HOM05D004124 ORTHO05D004779 7.1e-83 311.2 238 66.8
Phvul.001G262500 Phaseolus vulgaris HOM05D004124 ORTHO05D004779 9.3e-83 310.8 240 65.0
Ca_16453_v3 Cicer arietinum L. HOM05D004124 ORTHO05D004779 1.2e-82 310.5 240 64.6
Gohir.D04G183300 Gossypium hirsutum HOM05D004124 ORTHO05D004779 1.6e-82 310.1 243 64.6
Sabra01G0040400 Salix brachista HOM05D004124 ORTHO05D004779 2.1e-82 309.7 240 65.4
Glyma.18G005700 Glycine max HOM05D004124 ORTHO05D004779 7.8e-82 307.8 241 63.5
RcHm_v2.0_Chr4g0430131 Rosa chinensis HOM05D004124 ORTHO05D004779 1.3e-81 307.0 286 65.0
FAN07G1336 Fragaria x ananassa HOM05D004124 ORTHO05D004779 2.3e-81 306.2 241 62.2
FAN17G0270 Fragaria x ananassa HOM05D004124 ORTHO05D004779 3.9e-81 305.4 241 62.7
Glyma.11G251300 Glycine max HOM05D004124 ORTHO05D004779 3.9e-81 305.4 286 64.7
Lj6g0002227 Lotus japonicus HOM05D004124 ORTHO05D004779 6.6e-81 304.7 239 63.6
Psat5g096680 Pisum sativum HOM05D004124 ORTHO05D004779 8.7e-81 304.3 240 63.8
Ciclev10033913m.g Citrus clementina HOM05D004124 ORTHO05D004779 1.1e-80 303.9 306 62.4
Nn5g26967 Nelumbo nucifera HOM05D004124 ORTHO05D004779 1.1e-80 303.9 239 63.2
FvH4_4g23660 Fragaria vesca HOM05D004124 ORTHO05D004779 1.5e-80 303.5 239 62.8
FAN12G0357 Fragaria x ananassa HOM05D004124 ORTHO05D004779 1.5e-80 303.5 239 62.8
FAN22G1987 Fragaria x ananassa HOM05D004124 ORTHO05D004779 1.5e-80 303.5 239 62.8
Gorai.005G166600 Gossypium raimondii HOM05D004124 ORTHO05D004779 1.5e-80 303.5 242 64.9
Atru.chr11.2334 Acer truncatum HOM05D004124 ORTHO05D004779 2.5e-80 302.8 240 64.6
Prupe.1G225000 Prunus persica HOM05D004124 ORTHO05D004779 3.3e-80 302.4 221 67.0
SGA_v2.0_scaffold391G50628 Striga asiatica HOM05D004124 ORTHO05D004779 3.3e-80 302.4 242 63.6
Migut.K00950 Erythranthe guttata HOM05D004124 ORTHO05D004779 4.3e-80 302.0 284 65.5
Duzib248G0967 Durio zibethinus HOM05D004124 ORTHO05D004779 7.3e-80 301.2 283 64.3
Gohir.A03G125700 Gossypium hirsutum HOM05D004124 ORTHO05D004779 7.3e-80 301.2 287 66.2
Nn8g41237 Nelumbo nucifera HOM05D004124 ORTHO05D004779 3.6e-79 298.9 242 61.2
Rhsim12G0025300 Rhododendron simsii HOM05D004124 ORTHO05D004779 3.6e-79 298.9 285 65.3
Medtr3g085190 Medicago truncatula HOM05D004124 ORTHO05D004779 4.8e-79 298.5 238 60.9
MD16G1120200 Malus domestica HOM05D004124 ORTHO05D004779 8.1e-79 297.7 237 62.4
TPR.G17791 Trifolium pratense HOM05D004124 ORTHO05D004779 3.1e-78 295.8 231 64.1
Gohir.D02G148500 Gossypium hirsutum HOM05D004124 ORTHO05D004779 4.0e-78 295.4 244 63.9
Lalb_Chr11g0075781 Lupinus albus HOM05D004124 ORTHO05D004779 4.0e-78 295.4 242 60.7
Sed0002251 Sechium edule HOM05D004124 ORTHO05D004779 4.0e-78 295.4 234 64.5
Lalb_Chr13g0294351 Lupinus albus HOM05D004124 ORTHO05D004779 5.8e-77 291.6 240 61.2
TAR626G1310 Trochodendron aralioides HOM05D004124 ORTHO05D004779 5.8e-77 291.6 240 60.8
MBI13_g33572_MAGBIO Magnolia biondii HOM05D004124 ORTHO05D004779 1.7e-76 290.0 244 60.7
THA.LOC104807526 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 2.9e-76 289.3 243 60.5
Peaxi162Scf00128g01335 Petunia axillaris HOM05D004124 ORTHO05D004779 3.8e-76 288.9 238 61.3
DCAR_024098 Daucus carota HOM05D004124 ORTHO05D004779 8.4e-76 287.7 285 62.1
Lalb_Chr07g0187111 Lupinus albus HOM05D004124 ORTHO05D004779 1.1e-75 287.3 243 62.1
ECA233G0726 Erigeron canadensis HOM05D004124 ORTHO05D004779 1.9e-75 286.6 282 65.6
AUR62005628 Chenopodium quinoa HOM05D004124 ORTHO05D004779 2.4e-75 286.2 244 61.5
PGSC0003DMG400034304 Solanum tuberosum HOM05D004124 ORTHO05D004779 4.2e-75 285.4 286 62.6
Actinidia30642 Actinidia chinensis HOM05D004124 ORTHO05D004779 5.4e-75 285.0 241 60.6
Carub.0002s1361 Capsella rubella HOM05D004124 ORTHO05D004779 5.4e-75 285.0 244 59.8
Thhalv10018870m.g Eutrema salsugineum HOM05D004124 ORTHO05D004779 5.4e-75 285.0 246 60.2
Hund06093 Selenicereus undatus HOM05D004124 ORTHO05D004779 5.4e-75 285.0 242 60.7
AUR62028920 Chenopodium quinoa HOM05D004124 ORTHO05D004779 7.1e-75 284.6 244 61.5
Nitab4.5_0000861g0060 Nicotiana tabacum HOM05D004124 ORTHO05D004779 7.1e-75 284.6 285 62.1
Sopen05g010890 Solanum pennellii HOM05D004124 ORTHO05D004779 9.3e-75 284.3 286 62.2
Actinidia09646 Actinidia chinensis HOM05D004124 ORTHO05D004779 1.2e-74 283.9 230 62.6
Solyc05g015500.4 Solanum lycopersicum HOM05D004124 ORTHO05D004779 4.6e-74 282.0 284 62.3
CARHR059820 Cardamine hirsuta HOM05D004124 ORTHO05D004779 1.0e-73 280.8 241 59.8
Sabra03G0126200 Salix brachista HOM05D004124 ORTHO05D004779 1.0e-73 280.8 223 64.1
TAR383G0859 Trochodendron aralioides HOM05D004124 ORTHO05D004779 1.0e-73 280.8 238 59.7
EL10Ac6g13513 Beta vulgaris HOM05D004124 ORTHO05D004779 1.3e-73 280.4 244 59.4
Hund25468 Selenicereus undatus HOM05D004124 ORTHO05D004779 1.3e-73 280.4 260 56.9
AL2G25860 Arabidopsis lyrata HOM05D004124 ORTHO05D004779 1.8e-73 280.0 245 59.2
Sp5g22270 Schrenkiella parvula HOM05D004124 ORTHO05D004779 2.3e-73 279.6 246 61.0
Aa31sc584G20 Aethionema arabicum HOM05D004124 ORTHO05D004779 3.9e-73 278.9 243 59.7
AT1G67325 Arabidopsis thaliana HOM05D004124 ORTHO05D004779 3.9e-73 278.9 245 59.2
PSO063G2768 Papaver somniferum HOM05D004124 ORTHO05D004779 5.1e-73 278.5 246 60.6
PSO170G5699 Papaver somniferum HOM05D004124 ORTHO05D004779 5.1e-73 278.5 246 60.6
CAN.G163.7 Capsicum annuum HOM05D004124 ORTHO05D004779 1.5e-72 276.9 236 61.0
THA.LOC104807133 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 3.3e-72 275.8 245 60.8
ClCG11G013590 Citrullus lanatus HOM05D004124 ORTHO05D004779 2.8e-71 272.7 201 68.7
THA.LOC104825500 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 2.8e-71 272.7 242 58.7
Actinidia08066 Actinidia chinensis HOM05D004124 ORTHO05D004779 6.2e-71 271.6 275 53.8
vmacro01057 Vaccinium macrocarpon HOM05D004124 ORTHO05D004779 8.1e-71 271.2 342 55.3
HanXRQChr12g0372641 Helianthus annuus HOM05D004124 ORTHO05D004779 3.1e-70 269.2 233 62.2
Lj3A1069T45 Lonicera japonica HOM05D004124 ORTHO05D004779 6.9e-70 268.1 221 60.6
Oeu049141.1 Olea europaea HOM05D004124 ORTHO05D004779 9.0e-70 267.7 176 69.9
BcaB03g15346 Brassica carinata HOM05D004124 ORTHO05D004779 2.6e-69 266.2 246 56.9
Lalb_Chr08g0230601 Lupinus albus HOM05D004124 ORTHO05D004779 9.9e-69 264.2 242 56.6
Ah.03g136110 Amaranthus hybridus HOM05D004124 ORTHO05D004779 1.7e-68 263.5 225 60.0
ECA234G0541 Erigeron canadensis HOM05D004124 ORTHO05D004779 1.7e-68 263.5 234 58.1
Manes.13G011200 Manihot esculenta HOM05D004124 ORTHO05D004779 3.8e-68 262.3 235 57.0
HanXRQChr12g0361221 Helianthus annuus HOM05D004124 ORTHO05D004779 4.9e-68 261.9 228 61.8
Eucgr.B03499 Eucalyptus grandis HOM05D004124 ORTHO05D004779 6.4e-68 261.5 234 59.0
DCAR_026459 Daucus carota HOM05D004124 ORTHO05D004779 8.4e-68 261.2 224 57.6
Aqoxy7G02609 Aquilegia oxysepala HOM05D004124 ORTHO05D004779 1.9e-67 260.0 244 56.1
Sc04g0010190 Simmondsia chinensis HOM05D004124 ORTHO05D004779 2.4e-67 259.6 235 59.6
Thecc.02G206600 Theobroma cacao HOM05D004124 ORTHO05D004779 4.2e-67 258.8 210 63.3
Lj6A827G48 Lonicera japonica HOM05D004124 ORTHO05D004779 1.2e-66 257.3 210 62.9
ATR0626G238 Amborella trichopoda HOM05D004124 ORTHO05D004779 2.7e-66 256.1 243 56.8
Sed0008103 Sechium edule HOM05D004124 ORTHO05D004779 3.5e-66 255.8 223 61.4
Lsat_1_v5_gn_8_147801 Lactuca sativa HOM05D004124 ORTHO05D004779 1.0e-65 254.2 211 64.5
HanXRQChr17g0569011 Helianthus annuus HOM05D004124 ORTHO05D004779 3.0e-65 252.7 239 55.2
Lsat_1_v5_gn_4_400 Lactuca sativa HOM05D004124 ORTHO05D004779 7.4e-64 248.1 245 57.6
C06p38790 Brassica napus HOM05D004124 ORTHO05D004779 1.8e-62 243.4 247 53.4
BolC6t38971H Brassica oleracea HOM05D004124 ORTHO05D004779 1.2e-61 240.7 246 53.3
A07p33920 Brassica napus HOM05D000660 ORTHO05D000766 1.0e-60 237.7 250 53.6
BraA07t31018Z Brassica rapa HOM05D000660 ORTHO05D000766 6.5e-60 235.0 247 53.8
BraA07t30886Z Brassica rapa HOM05D004124 ORTHO05D004779 5.5e-59 231.9 250 52.0
C06p42940 Brassica napus HOM05D004124 ORTHO05D004779 7.1e-59 231.5 247 53.0
A07p32620 Brassica napus HOM05D004124 ORTHO05D004779 6.0e-58 228.4 248 51.6
CiPaw.05G108900 Carya illinoinensis HOM05D004124 ORTHO05D004779 1.3e-57 227.3 192 60.9
Oeu006524.1 Olea europaea HOM05D004124 ORTHO05D004779 3.0e-57 226.1 190 58.9
CDE04G3109 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 6.7e-57 224.9 221 54.8
BolC6t39143H Brassica oleracea HOM05D004124 ORTHO05D004779 8.7e-57 224.6 246 52.4
Zm00001eb174550 Zea mays HOM05D004124 ORTHO05D004779 1.9e-56 223.4 237 50.2
Zm00001eb035500 Zea mays HOM05D004124 ORTHO05D004779 3.2e-51 206.1 244 45.5
CSS0020706 Camellia sinensis var. sinensis HOM05D004124 ORTHO05D004779 9.3e-51 204.5 229 61.6
Duzib268G1736 Durio zibethinus HOM05D004124 ORTHO05D004779 4.6e-50 202.2 184 57.6
CSS0002767 Camellia sinensis var. sinensis HOM05D004124 ORTHO05D004779 3.9e-49 199.1 197 53.8
Os08g0521400 Oryza sativa ssp. japonica HOM05D004124 ORTHO05D004779 5.7e-48 195.3 246 46.3
HPP92_015269 Vanilla planifolia HOM05D004124 ORTHO05D004779 2.2e-44 183.3 199 50.8
Nitab4.5_0003900g0010 Nicotiana tabacum HOM05D004124 ORTHO05D004779 3.0e-41 172.9 229 53.7
Lsat_1_v5_gn_5_94821 Lactuca sativa HOM05D004124 ORTHO05D004779 1.1e-35 154.5 215 57.2
AagrBONN_evm.TU.Sc2ySwM_340.309 Anthoceros agrestis HOM05D004124 ORTHO05D004779 4.7e-34 149.1 225 40.0
SMO200G0023 Selaginella moellendorffii HOM05D004124 ORTHO05D004779 1.7e-31 140.6 231 38.1
Pp3c4_8110 Physcomitrium patens HOM05D004124 ORTHO05D004779 2.9e-28 129.8 237 38.4
Mapoly0005s0267 Marchantia polymorpha HOM05D004124 ORTHO05D004779 2.5e-27 126.7 235 35.3
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 3.0e-25 119.8 202 39.6
PSO782G3756 Papaver somniferum HOM05D004124 ORTHO05D004779 2.0e-24 117.1 209 36.8
CiPaw.14G021000 Carya illinoinensis HOM05D004124 ORTHO05D004779 2.6e-24 116.7 199 36.2
Cpa.g.sc43.62 Carica papaya HOM05D004124 ORTHO05D004779 3.3e-24 116.3 130 49.2
Nn1g00866 Nelumbo nucifera HOM05D004124 ORTHO05D004779 4.4e-24 115.9 208 36.5
CDE06G1866 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 7.5e-24 115.2 229 34.9
HanXRQChr08g0221261 Helianthus annuus HOM05D004124 ORTHO05D004779 1.3e-23 114.4 131 48.1
arahy.Tifrunner.gnm1.ann1.FNBZ5S Arachis hypogaea HOM05D004124 ORTHO05D004779 4.8e-23 112.5 202 37.1
BcaNung07398 Brassica carinata HOM05D004124 ORTHO05D004779 1.4e-22 110.9 52 96.2
PGR083G0898 Punica granatum HOM05D004124 ORTHO05D004779 3.1e-22 109.8 133 50.4
CDE06G1514 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 5.3e-22 109.0 193 36.3
TAR374G0532 Trochodendron aralioides HOM05D004124 ORTHO05D004779 5.3e-22 109.0 207 35.7
Lj3g0004507 Lotus japonicus HOM05D004124 ORTHO05D004779 9.1e-22 108.2 211 34.6
CBR_g53713 Chara braunii HOM05D004124 ORTHO05D004779 5.9e-21 105.5 232 34.9
Glyma.18G252600 Glycine max HOM05D004124 ORTHO05D004779 1.3e-20 104.4 208 33.7
arahy.Tifrunner.gnm1.ann1.4H3LGZ Arachis hypogaea HOM05D004124 ORTHO05D004779 2.2e-20 103.6 214 35.0
Ca_14066_v3 Cicer arietinum L. HOM05D004124 ORTHO05D004779 3.8e-20 102.8 208 35.1
Aqoxy3G02746 Aquilegia oxysepala HOM05D004124 ORTHO05D004779 6.5e-20 102.1 211 34.1
TAR375G0412 Trochodendron aralioides HOM05D004124 ORTHO05D004779 6.5e-20 102.1 211 35.1
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 8.5e-20 101.7 229 32.3
Phvul.008G046200 Phaseolus vulgaris HOM05D004124 ORTHO05D004779 4.2e-19 99.4 200 37.5
GSVIVG01018266001 Vitis vinifera HOM05D004124 ORTHO05D004779 6.1e-18 95.5 168 38.7
Os07g0490600 Oryza sativa ssp. japonica HOM05D004124 ORTHO05D004779 4.0e-17 92.8 263 31.9
Zm00001eb105300 Zea mays HOM05D004124 ORTHO05D004779 6.8e-17 92.0 234 33.3
HanXRQChr12g0379451 Helianthus annuus HOM05D004124 ORTHO05D004779 1.2e-16 91.3 55 69.1
PGR083G1960 Punica granatum HOM05D000500 ORTHO05D000367 1.5e-16 90.9 54 74.1
Actinidia20714 Actinidia chinensis HOM05D004124 ORTHO05D004779 4.8e-15 85.9 79 55.7
AagrBONN_evm.TU.Sc2ySwM_368.334 Anthoceros agrestis HOM05D004124 ORTHO05D004779 1.6e-13 80.9 145 35.9
Glyma.09G242400 Glycine max HOM05D004124 ORTHO05D004779 1.7e-12 77.4 151 35.1
Eucgr.L03169 Eucalyptus grandis HOM05D004124 ORTHO05D004779 7.2e-11 72.0 102 41.2
QL04p030567 Quercus lobata HOM05D004124 ORTHO05D004779 9.5e-11 71.6 147 36.1
PSO063G6881 Papaver somniferum HOM05D004124 ORTHO05D004779 1.2e-10 71.2 167 32.9
Psat7g021520 Pisum sativum HOM05D004124 ORTHO05D004779 1.4e-09 67.8 240 25.4
CANSAT21G0875 Cannabis sativa HOM05D004124 ORTHO05D004779 1.8e-09 67.4 78 47.4
QL04p030562 Quercus lobata HOM05D004124 ORTHO05D000004 6.8e-09 65.5 50 54.0
Haze_02835 Corylus avellana HOM05D004124 ORTHO05D004779 2.6e-08 63.5 48 54.2
ATR0057G076 Amborella trichopoda HOM05D004124 ORTHO05D004779 1.7e-07 60.8 34 64.7
SMO181G0003 Selaginella moellendorffii HOM05D004124 ORTHO05D004779 1.7e-07 60.8 30 76.7
Zm00001eb321720 Zea mays HOM05D004124 ORTHO05D004779 2.2e-07 60.5 47 57.4


User provided reference genes

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