Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g8730 Utricularia gibba HOM05D005283 ORTHO05D006769 4.0e-198 694.5 338 100.0
Oeu029706.1 Olea europaea HOM05D005283 ORTHO05D000116 6.4e-95 351.7 283 63.3
Migut.G00154 Erythranthe guttata HOM05D005283 ORTHO05D006769 1.1e-94 350.9 284 63.4
Hma1.2p1_1185F.1_g265090 Hydrangea macrophylla HOM05D005283 ORTHO05D006769 2.4e-94 349.7 284 62.0
Dinv44377 Davidia involucrata HOM05D005283 ORTHO05D006769 9.2e-94 347.8 283 61.5
Dinv29746 Davidia involucrata HOM05D005283 ORTHO05D006769 1.3e-92 344.0 283 61.5
Sopen01g032430 Solanum pennellii HOM05D005283 ORTHO05D006769 3.6e-90 335.9 280 59.3
TAR362G0604 Trochodendron aralioides HOM05D005283 ORTHO05D006769 3.6e-90 335.9 337 52.2
Ciclev10004285m.g Citrus clementina HOM05D005283 ORTHO05D006769 6.2e-90 335.1 281 60.9
Thecc.04G285400 Theobroma cacao HOM05D005283 ORTHO05D006769 8.1e-90 334.7 284 60.2
Solyc01g080620.3 Solanum lycopersicum HOM05D005283 ORTHO05D006769 1.1e-89 334.3 280 59.3
Nitab4.5_0000059g0420 Nicotiana tabacum HOM05D005283 ORTHO05D006769 1.4e-89 334.0 292 56.8
Nn3g21453 Nelumbo nucifera HOM05D005283 ORTHO05D006769 2.4e-89 333.2 284 60.2
Peaxi162Scf01123g00233 Petunia axillaris HOM05D005283 ORTHO05D006769 3.1e-89 332.8 283 58.3
MSTRG.3910 Avicennia marina HOM05D005283 ORTHO05D006769 6.9e-89 331.6 284 59.9
CSS0043341 Camellia sinensis var. sinensis HOM05D005283 ORTHO05D006769 1.2e-88 330.9 282 59.6
Actinidia40275 Actinidia chinensis HOM05D005283 ORTHO05D006769 1.5e-88 330.5 283 59.7
Duzib151G1199 Durio zibethinus HOM05D005283 ORTHO05D006769 1.5e-88 330.5 284 60.2
Nitab4.5_0001120g0020 Nicotiana tabacum HOM05D005283 ORTHO05D006769 3.4e-88 329.3 283 58.0
Potri.010G014000 Populus trichocarpa HOM05D005283 ORTHO05D006769 9.9e-88 327.8 282 58.5
QL06p009017 Quercus lobata HOM05D005283 ORTHO05D006769 9.9e-88 327.8 284 57.7
Eucgr.B01324 Eucalyptus grandis HOM05D005283 ORTHO05D006769 1.3e-87 327.4 284 57.7
Sabra10G0008900 Salix brachista HOM05D005283 ORTHO05D006769 1.3e-87 327.4 283 58.3
Cc03_g01850 Coffea canephora HOM05D005283 ORTHO05D006769 1.7e-87 327.0 283 59.0
CiPaw.01G148000 Carya illinoinensis HOM05D005283 ORTHO05D006769 2.2e-87 326.6 284 59.5
vmacro08159 Vaccinium macrocarpon HOM05D005283 ORTHO05D006769 2.9e-87 326.2 285 57.9
CAN.G185.38 Capsicum annuum HOM05D005283 ORTHO05D006769 1.1e-86 324.3 283 58.0
SGA_v2.0_scaffold18G08298 Striga asiatica HOM05D005283 ORTHO05D006769 1.9e-86 323.6 310 54.8
PSO170G5664 Papaver somniferum HOM05D005283 ORTHO05D006769 3.2e-86 322.8 281 59.4
Atru.BG.90.p Acer truncatum HOM05D005283 ORTHO05D006769 7.1e-86 321.6 284 59.2
MD13G1167900 Malus domestica HOM05D005283 ORTHO05D006769 7.1e-86 321.6 284 57.0
CANSAT78G0446 Cannabis sativa HOM05D005283 ORTHO05D006769 9.3e-86 321.2 285 57.5
MD08G1066800 Malus domestica HOM05D005283 ORTHO05D006769 9.3e-86 321.2 284 57.0
DCAR_027073 Daucus carota HOM05D005283 ORTHO05D006769 1.6e-85 320.5 286 57.7
PSO210G5109 Papaver somniferum HOM05D005283 ORTHO05D006769 3.5e-85 319.3 281 59.4
Rhsim04G0223000 Rhododendron simsii HOM05D005283 ORTHO05D006769 4.6e-85 318.9 287 57.8
Aqoxy2G02976 Aquilegia oxysepala HOM05D005283 ORTHO05D006769 7.8e-85 318.2 284 57.4
Lj6A677G73 Lonicera japonica HOM05D005283 ORTHO05D006769 2.3e-84 316.6 280 58.6
Prupe.1G135400 Prunus persica HOM05D005283 ORTHO05D006769 3.0e-84 316.2 284 57.0
RcHm_v2.0_Chr4g0422381 Rosa chinensis HOM05D005283 ORTHO05D006769 6.6e-84 315.1 284 57.4
Lalb_Chr18g0051671 Lupinus albus HOM05D005283 ORTHO05D006769 8.7e-84 314.7 281 55.5
MELO3C006668.2 Cucumis melo HOM05D005283 ORTHO05D006769 1.1e-83 314.3 324 50.0
FAN12G0573 Fragaria x ananassa HOM05D005283 ORTHO05D006769 5.6e-83 312.0 284 56.7
FAN12G1245 Fragaria x ananassa HOM05D005283 ORTHO05D006769 5.6e-83 312.0 284 56.7
Manes.03G195900 Manihot esculenta HOM05D005283 ORTHO05D006769 5.6e-83 312.0 287 57.1
PGR031G1610 Punica granatum HOM05D005283 ORTHO05D006769 7.3e-83 311.6 285 56.8
arahy.Tifrunner.gnm1.ann1.PZAP36 Arachis hypogaea HOM05D005283 ORTHO05D006769 1.6e-82 310.5 286 56.3
arahy.Tifrunner.gnm1.ann1.Z6JJZG Arachis hypogaea HOM05D005283 ORTHO05D006769 1.6e-82 310.5 286 56.3
CsaV3_3G014700 Cucumis sativus L. HOM05D005283 ORTHO05D006769 1.6e-82 310.5 283 54.4
TWI09G0775 Tripterygium wilfordii HOM05D005283 ORTHO05D006769 2.1e-82 310.1 280 56.1
Cfa015392 Carpinus fangiana HOM05D005283 ORTHO05D006769 8.1e-82 308.1 284 57.0
TWI53G1858 Tripterygium wilfordii HOM05D005283 ORTHO05D006769 1.1e-81 307.8 280 56.4
FvH4_4g18240 Fragaria vesca HOM05D005283 ORTHO05D006769 1.4e-81 307.4 284 56.3
MBI18_g13696_MAGBIO Magnolia biondii HOM05D005283 ORTHO05D006769 1.4e-81 307.4 285 57.9
Gohir.D02G054700 Gossypium hirsutum HOM05D005283 ORTHO05D006769 2.4e-81 306.6 285 57.2
Gorai.005G060600 Gossypium raimondii HOM05D005283 ORTHO05D006769 2.4e-81 306.6 285 57.2
Haze_01194 Corylus avellana HOM05D005283 ORTHO05D006769 5.3e-81 305.4 284 56.3
HanXRQChr13g0411191 Helianthus annuus HOM05D005283 ORTHO05D006769 1.2e-80 304.3 280 55.4
ClCG05G006140 Citrullus lanatus HOM05D005283 ORTHO05D006769 9.9e-80 301.2 283 54.1
Glyma.07G247100 Glycine max HOM05D005283 ORTHO05D006769 2.9e-79 299.7 284 54.2
Glyma.17G026900 Glycine max HOM05D005283 ORTHO05D006769 3.8e-79 299.3 284 53.5
Gohir.A02G049600 Gossypium hirsutum HOM05D005283 ORTHO05D006769 4.9e-79 298.9 285 56.1
ECA240G0403 Erigeron canadensis HOM05D005283 ORTHO05D006769 1.4e-78 297.4 280 53.9
EL10Ac3g06605 Beta vulgaris HOM05D005283 ORTHO05D006769 7.1e-78 295.0 284 54.2
Hund20553 Selenicereus undatus HOM05D005283 ORTHO05D006769 1.2e-77 294.3 284 53.5
Psat4g027360 Pisum sativum HOM05D005283 ORTHO05D006769 4.6e-77 292.4 281 54.1
Sed0007600 Sechium edule HOM05D005283 ORTHO05D006769 6.0e-77 292.0 283 53.0
AUR62041505 Chenopodium quinoa HOM05D005283 ORTHO05D006769 7.9e-77 291.6 284 54.9
Phvul.003G105900 Phaseolus vulgaris HOM05D005283 ORTHO05D006769 1.0e-76 291.2 284 52.8
Medtr4g119960 Medicago truncatula HOM05D005283 ORTHO05D006769 1.8e-76 290.4 281 53.4
TPR.G3193 Trifolium pratense HOM05D005283 ORTHO05D006769 8.7e-76 288.1 281 53.4
Sc25g0004780 Simmondsia chinensis HOM05D005283 ORTHO05D006769 1.9e-75 287.0 283 54.4
FAN17G2169 Fragaria x ananassa HOM05D005283 ORTHO05D006769 2.5e-75 286.6 263 56.3
VMungo1215G0467 Vigna mungo HOM05D005283 ORTHO05D006769 5.6e-75 285.4 284 51.4
ATR0796G268 Amborella trichopoda HOM05D005283 ORTHO05D006769 7.4e-75 285.0 291 54.6
Lj4g0026758 Lotus japonicus HOM05D005283 ORTHO05D006769 3.7e-74 282.7 284 52.1
Atru.chr4.2851 Acer truncatum HOM05D005283 ORTHO05D006769 4.8e-74 282.3 254 57.9
Ca_21491_v3 Cicer arietinum L. HOM05D005283 ORTHO05D006769 1.1e-73 281.2 283 53.0
Cpa.g.sc66.36 Carica papaya HOM05D005283 ORTHO05D006769 4.9e-71 272.3 263 55.5
Lsat_1_v5_gn_5_54040 Lactuca sativa HOM05D005283 ORTHO05D006769 1.9e-70 270.4 296 50.0
THA.LOC104820270 Tarenaya hassleriana HOM05D005283 ORTHO05D006769 3.2e-70 269.6 281 52.7
AL7G39450 Arabidopsis lyrata HOM05D005283 ORTHO05D006769 1.8e-68 263.8 292 48.6
AT4G15840 Arabidopsis thaliana HOM05D005283 ORTHO05D006769 3.9e-68 262.7 292 48.3
TAR633G2729 Trochodendron aralioides HOM05D005283 ORTHO05D006769 5.1e-68 262.3 231 59.7
Thhalv10024402m.g Eutrema salsugineum HOM05D005283 ORTHO05D006769 6.7e-68 261.9 292 47.9
Carub.0007s2581 Capsella rubella HOM05D005283 ORTHO05D006769 8.7e-68 261.5 292 48.6
CDE05G1280 Ceratophyllum demersum HOM05D005283 ORTHO05D006769 4.3e-67 259.2 284 50.4
Ah.13g074630 Amaranthus hybridus HOM05D005283 ORTHO05D006769 6.9e-65 251.9 289 50.5
Sp7g14240 Schrenkiella parvula HOM05D005283 ORTHO05D006769 1.2e-64 251.1 292 46.2
CARHR290370 Cardamine hirsuta HOM05D005283 ORTHO05D006769 5.8e-64 248.8 292 46.9
BcaC06g33444 Brassica carinata HOM05D005283 ORTHO05D006769 7.6e-64 248.4 292 47.3
C07p47430 Brassica napus HOM05D005283 ORTHO05D006769 7.6e-64 248.4 292 47.3
BolC7t45270H Brassica oleracea HOM05D005283 ORTHO05D006769 7.6e-64 248.4 292 47.3
BcaC06g32968 Brassica carinata HOM05D005283 ORTHO05D006769 2.9e-63 246.5 292 46.6
A03p49360 Brassica napus HOM05D005283 ORTHO05D006769 8.4e-63 245.0 293 47.4
BraA03t14037Z Brassica rapa HOM05D005283 ORTHO05D006769 1.9e-62 243.8 293 47.1
Zm00001eb142310 Zea mays HOM05D005283 ORTHO05D006769 9.3e-62 241.5 282 47.5
Zm00001eb363540 Zea mays HOM05D005283 ORTHO05D006769 1.6e-61 240.7 282 48.6
Os01g0932600 Oryza sativa ssp. japonica HOM05D005283 ORTHO05D006769 4.6e-61 239.2 281 47.0
AUR62042850 Chenopodium quinoa HOM05D005283 ORTHO05D006769 5.7e-59 232.3 221 56.1
HPP92_002145 Vanilla planifolia HOM05D005283 ORTHO05D006769 2.4e-57 226.9 264 48.9
SEGI_38162 Sequoiadendron giganteum HOM05D005283 ORTHO05D006769 6.9e-49 198.7 266 44.4
SEGI_40593 Sequoiadendron giganteum HOM05D005283 ORTHO05D006769 6.9e-49 198.7 266 44.4
Hma1.2p1_2906F.1_g330120 Hydrangea macrophylla HOM05D005283 ORTHO05D006769 1.6e-45 187.6 184 56.5
COL.COLO4_13862 Corchorus olitorius HOM05D005283 ORTHO05D006769 2.7e-45 186.8 168 57.1
CDE11G0961 Ceratophyllum demersum HOM05D005283 ORTHO05D006769 1.1e-41 174.9 293 39.2
Pp3c6_10590 Physcomitrium patens HOM05D005283 ORTHO05D006769 4.8e-34 149.4 289 37.4
Pp3c5_16090 Physcomitrium patens HOM05D005283 ORTHO05D006769 2.5e-30 137.1 293 36.2
Pp3c16_9230 Physcomitrium patens HOM05D005283 ORTHO05D006769 9.4e-30 135.2 299 34.1
GSVIVG01017732001 Vitis vinifera HOM05D005283 ORTHO05D006769 1.0e-20 105.1 66 74.2
Pp3c20_17000 Physcomitrium patens HOM05D005283 ORTHO05D006769 4.8e-18 96.3 256 31.2
AUR62006322 Chenopodium quinoa HOM05D007078 ORTHO05D008745 5.0e-15 86.3 167 37.1
GSVIVG01017731001 Vitis vinifera HOM05D005283 ORTHO05D006769 1.6e-13 81.3 59 64.4
AUR62038887 Chenopodium quinoa HOM05D002461 ORTHO05D000898 4.4e-11 73.2 58 62.1
AUR62005650 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.7e-10 70.1 55 61.8
AUR62010442 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.7e-10 70.1 55 61.8
AUR62011828 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.7e-10 70.1 55 61.8
AUR62024534 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.7e-10 70.1 55 61.8
AUR62024696 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.7e-10 70.1 55 61.8
AUR62029074 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.7e-10 70.1 55 61.8
AUR62031767 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.7e-10 70.1 55 61.8
AUR62033912 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.7e-10 70.1 55 61.8
AUR62035885 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.7e-10 70.1 55 61.8
AUR62035966 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.7e-10 70.1 55 61.8
AUR62002595 Chenopodium quinoa HOM05D002461 ORTHO05D000898 4.9e-10 69.7 55 61.8
TAR633G1238 Trochodendron aralioides HOM05D005283 ORTHO05D006769 2.9e-07 60.5 35 74.3


User provided reference genes

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