Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g8712 Utricularia gibba HOM05D001250 ORTHO05D000627 1.9e-167 592.4 292 100.0
unitig_46.g18697 Utricularia gibba HOM05D001250 ORTHO05D000627 9.0e-13 78.6 108 41.7
MSTRG.10133 Avicennia marina HOM05D001250 ORTHO05D000627 2.0e-12 77.4 96 46.9
unitig_0.g2589 Utricularia gibba HOM05D001250 ORTHO05D000627 1.0e-11 75.1 122 41.0
MSTRG.3872 Avicennia marina HOM05D001250 ORTHO05D000627 6.5e-11 72.4 91 47.3
Migut.O00779 Erythranthe guttata HOM05D001250 ORTHO05D000627 6.5e-11 72.4 85 48.2
Rhsim01G0289000 Rhododendron simsii HOM05D001250 ORTHO05D000627 1.1e-10 71.6 82 45.1
SGA_v2.0_scaffold444G51709 Striga asiatica HOM05D001250 ORTHO05D000627 1.9e-10 70.9 96 44.8
SalBow8G2134 Salvia bowleyana HOM05D001250 ORTHO05D000627 9.3e-10 68.6 90 44.4
SalBow8G4757 Salvia bowleyana HOM05D001250 ORTHO05D000627 9.3e-10 68.6 90 44.4
Thecc.01G309700 Theobroma cacao HOM05D001250 ORTHO05D000627 9.3e-10 68.6 91 40.7
Duzib138G0854 Durio zibethinus HOM05D001250 ORTHO05D000627 1.6e-09 67.8 90 41.1
MBI18_g24952_MAGBIO Magnolia biondii HOM05D001250 ORTHO05D000627 2.1e-09 67.4 68 50.0
Hma1.2p1_0212F.1_g090130 Hydrangea macrophylla HOM05D001250 ORTHO05D000627 2.7e-09 67.0 68 48.5
Oeu046561.1 Olea europaea HOM05D001250 ORTHO05D000627 2.7e-09 67.0 70 47.1
Gohir.A08G041100 Gossypium hirsutum HOM05D001250 ORTHO05D000627 3.6e-09 66.6 68 48.5
Gorai.004G050900 Gossypium raimondii HOM05D001250 ORTHO05D000627 3.6e-09 66.6 68 48.5
QL06p011328 Quercus lobata HOM05D001250 ORTHO05D000627 3.6e-09 66.6 83 41.0
Glyma.02G029100 Glycine max HOM05D001250 ORTHO05D000627 4.6e-09 66.2 75 41.3
Manes.05G001500 Manihot esculenta HOM05D001250 ORTHO05D000627 4.6e-09 66.2 75 45.3
Gohir.A11G111400 Gossypium hirsutum HOM05D001250 ORTHO05D000627 6.1e-09 65.9 116 35.3
Gohir.D11G116700 Gossypium hirsutum HOM05D001250 ORTHO05D000627 6.1e-09 65.9 116 35.3
Gorai.007G124800 Gossypium raimondii HOM05D001250 ORTHO05D000627 6.1e-09 65.9 116 35.3
PSO210G5632 Papaver somniferum HOM05D001250 ORTHO05D000627 6.1e-09 65.9 64 48.4
PSO761G0358 Papaver somniferum HOM05D001250 ORTHO05D000627 6.1e-09 65.9 64 48.4
Gohir.D08G051200 Gossypium hirsutum HOM05D001250 ORTHO05D000627 7.9e-09 65.5 68 47.1
Lsat_1_v5_gn_6_19301 Lactuca sativa HOM05D001250 ORTHO05D000627 7.9e-09 65.5 72 48.6
Manes.01G225300 Manihot esculenta HOM05D001250 ORTHO05D000627 7.9e-09 65.5 120 32.5
Duzib211G0582 Durio zibethinus HOM05D001250 ORTHO05D000627 1.0e-08 65.1 77 44.2
Glyma.19G214600 Glycine max HOM05D001250 ORTHO05D000627 1.0e-08 65.1 102 39.2
TWI73G0097 Tripterygium wilfordii HOM05D001250 ORTHO05D000627 1.0e-08 65.1 66 48.5
Nn4g25662 Nelumbo nucifera HOM05D001250 ORTHO05D000627 1.3e-08 64.7 79 45.6
Solyc01g060420.2 Solanum lycopersicum HOM05D001250 ORTHO05D000627 1.3e-08 64.7 60 53.3
DCAR_023331 Daucus carota HOM05D001250 ORTHO05D000627 1.8e-08 64.3 70 47.1
TAR365G0059 Trochodendron aralioides HOM05D001250 ORTHO05D000627 1.8e-08 64.3 77 41.6
Oeu026232.1 Olea europaea HOM05D001250 ORTHO05D000627 2.3e-08 63.9 55 52.7
Sopen01g026560 Solanum pennellii HOM05D001250 ORTHO05D000627 2.3e-08 63.9 60 53.3
unitig_37.g12407 Utricularia gibba HOM05D001250 ORTHO05D000627 2.3e-08 63.9 60 55.0
CAN.G14.1 Capsicum annuum HOM05D001250 ORTHO05D000627 3.9e-08 63.2 73 50.7
VMungo1383G2873 Vigna mungo HOM05D001490 ORTHO05D001450 5.1e-08 62.8 104 30.8
arahy.Tifrunner.gnm1.ann1.GUG7VU Arachis hypogaea HOM05D001250 ORTHO05D000627 6.7e-08 62.4 64 53.1
MSTRG.13546 Avicennia marina HOM05D001250 ORTHO05D000627 8.7e-08 62.0 88 36.4
COL.COLO4_23269 Corchorus olitorius HOM05D001250 ORTHO05D000627 8.7e-08 62.0 68 47.1
Glyma.03G217900 Glycine max HOM05D001250 ORTHO05D000627 8.7e-08 62.0 62 50.0
Sc11g0003530 Simmondsia chinensis HOM05D001250 ORTHO05D000627 8.7e-08 62.0 115 33.9
CSS0016388 Camellia sinensis var. sinensis HOM05D001250 ORTHO05D000627 1.1e-07 61.6 60 50.0
Peaxi162Scf00065g00036 Petunia axillaris HOM05D001250 ORTHO05D000627 1.1e-07 61.6 70 45.7
Actinidia15584 Actinidia chinensis HOM05D001250 ORTHO05D000627 1.5e-07 61.2 60 51.7
Dinv02073 Davidia involucrata HOM05D001250 ORTHO05D000627 1.5e-07 61.2 65 47.7
Gohir.D10G174700 Gossypium hirsutum HOM05D001250 ORTHO05D000627 1.5e-07 61.2 72 45.8
Peaxi162Scf01141g00013 Petunia axillaris HOM05D001250 ORTHO05D000627 1.9e-07 60.8 90 36.7
CDE06G0381 Ceratophyllum demersum HOM05D001250 ORTHO05D000627 2.5e-07 60.5 88 36.4
Peaxi162Scf00753g00022 Petunia axillaris HOM05D001250 ORTHO05D000627 2.5e-07 60.5 84 38.1
Sabra14G0092000 Salix brachista HOM05D001250 ORTHO05D000627 2.5e-07 60.5 73 42.5
SGA_v2.0_scaffold36G14545 Striga asiatica HOM05D001250 ORTHO05D000627 2.5e-07 60.5 60 46.7
TWI74G1378 Tripterygium wilfordii HOM05D001250 ORTHO05D000627 2.5e-07 60.5 99 36.4
Phvul.001G211400 Phaseolus vulgaris HOM05D001250 ORTHO05D000627 3.3e-07 60.1 63 50.8
PGSC0003DMG400015611 Solanum tuberosum HOM05D001250 ORTHO05D000627 3.3e-07 60.1 53 50.9
Haze_05004 Corylus avellana HOM05D001250 ORTHO05D000627 4.3e-07 59.7 81 38.3
Glyma.08G366900 Glycine max HOM05D001250 ORTHO05D000627 4.3e-07 59.7 79 36.7
Gohir.D07G131400 Gossypium hirsutum HOM05D001250 ORTHO05D000627 4.3e-07 59.7 92 35.9
Gorai.001G142500 Gossypium raimondii HOM05D001250 ORTHO05D000627 4.3e-07 59.7 92 35.9
Manes.15G006800 Manihot esculenta HOM05D001250 ORTHO05D000627 4.3e-07 59.7 74 40.5
Oeu054994.1 Olea europaea HOM05D001250 ORTHO05D000627 4.3e-07 59.7 74 43.2
QL12p028923 Quercus lobata HOM05D001250 ORTHO05D000627 4.3e-07 59.7 72 44.4
RcHm_v2.0_Chr4g0424291 Rosa chinensis HOM05D001250 ORTHO05D000627 4.3e-07 59.7 68 47.1
ATR1149G134 Amborella trichopoda HOM05D001250 ORTHO05D000627 5.7e-07 59.3 45 53.3
CiPaw.08G091900 Carya illinoinensis HOM05D001250 ORTHO05D000627 5.7e-07 59.3 66 43.9
Sc13g0002450 Simmondsia chinensis HOM05D003047 ORTHO05D000627 5.7e-07 59.3 55 47.3
TWI09G0832 Tripterygium wilfordii HOM05D001250 ORTHO05D000627 5.7e-07 59.3 85 41.2
TWI18G0415 Tripterygium wilfordii HOM05D001250 ORTHO05D000627 5.7e-07 59.3 45 53.3
Peaxi162Scf00753g00021 Petunia axillaris HOM05D001250 ORTHO05D000627 7.4e-07 58.9 89 37.1
Rhsim04G0232300 Rhododendron simsii HOM05D001250 ORTHO05D000627 7.4e-07 58.9 62 51.6
Sc11g0001400 Simmondsia chinensis HOM05D001250 ORTHO05D000627 7.4e-07 58.9 46 54.3
SGA_v2.0_scaffold170G38784 Striga asiatica HOM05D001250 ORTHO05D000627 7.4e-07 58.9 104 30.8
VMungo1383G0745 Vigna mungo HOM05D001250 ORTHO05D000627 7.4e-07 58.9 68 47.1
Aqoxy2G02813 Aquilegia oxysepala HOM05D001250 ORTHO05D000627 9.7e-07 58.5 64 43.8
Carub.0002s1329 Capsella rubella HOM05D001250 ORTHO05D000627 9.7e-07 58.5 70 41.4
COL.COLO4_37888 Corchorus olitorius HOM05D001250 ORTHO05D000627 9.7e-07 58.5 47 53.2
DCAR_023643 Daucus carota HOM05D001250 ORTHO05D000627 9.7e-07 58.5 78 38.5
Dinv44319 Davidia involucrata HOM05D001250 ORTHO05D000627 9.7e-07 58.5 65 46.2
Thhalv10015667m.g Eutrema salsugineum HOM05D003047 ORTHO05D000627 9.7e-07 58.5 48 47.9
Lsat_1_v5_gn_8_40320 Lactuca sativa HOM05D001250 ORTHO05D000627 9.7e-07 58.5 70 42.9
Potri.002G199200 Populus trichocarpa HOM05D001250 ORTHO05D000627 9.7e-07 58.5 106 35.8
Ciclev10022452m.g Citrus clementina HOM05D001250 ORTHO05D000627 1.3e-06 58.2 68 41.2
DCAR_002870 Daucus carota HOM05D001250 ORTHO05D000627 1.3e-06 58.2 66 50.0
ECA233G2451 Erigeron canadensis HOM05D001250 ORTHO05D000627 1.3e-06 58.2 63 47.6
Thhalv10019525m.g Eutrema salsugineum HOM05D001250 ORTHO05D000627 1.3e-06 58.2 74 37.8
SalBow8G0278 Salvia bowleyana HOM05D001250 ORTHO05D000627 1.3e-06 58.2 62 46.8
SalBow8G2676 Salvia bowleyana HOM05D001250 ORTHO05D000627 1.3e-06 58.2 62 46.8
Sed0006491 Sechium edule HOM05D001250 ORTHO05D000627 1.3e-06 58.2 75 42.7
Solyc05g006310.3 Solanum lycopersicum HOM05D001250 ORTHO05D000627 1.3e-06 58.2 51 51.0
Sopen05g002280 Solanum pennellii HOM05D001250 ORTHO05D000627 1.3e-06 58.2 51 51.0
BcaB03g15906 Brassica carinata HOM05D001250 ORTHO05D000627 1.6e-06 57.8 78 37.2
MBI19_g17431_MAGBIO Magnolia biondii HOM05D003047 ORTHO05D000627 1.6e-06 57.8 39 59.0
Oeu026673.1 Olea europaea HOM05D001250 ORTHO05D000627 1.6e-06 57.8 51 51.0
Potri.008G123100 Populus trichocarpa HOM05D001250 ORTHO05D000627 1.6e-06 57.8 132 28.8
Atru.chr5.1055 Acer truncatum HOM05D001250 ORTHO05D000627 2.2e-06 57.4 72 40.3
CDE12G0399 Ceratophyllum demersum HOM05D004610 ORTHO05D001148 2.2e-06 57.4 88 34.1
DCAR_027019 Daucus carota HOM05D001250 ORTHO05D000627 2.2e-06 57.4 64 42.2
Potri.014G123700 Populus trichocarpa HOM05D001250 ORTHO05D000627 2.2e-06 57.4 72 43.1
CARHR059420 Cardamine hirsuta HOM05D001250 ORTHO05D000627 2.8e-06 57.0 80 36.2
Cc11_g09880 Coffea canephora HOM05D001250 ORTHO05D000627 2.8e-06 57.0 87 39.1
Glyma.18G295500 Glycine max HOM05D001250 ORTHO05D000627 2.8e-06 57.0 73 37.0
Lalb_Chr05g0217241 Lupinus albus HOM05D001250 ORTHO05D000627 2.8e-06 57.0 48 54.2
Nn6g32306 Nelumbo nucifera HOM05D001250 ORTHO05D000627 2.8e-06 57.0 44 59.1
Oeu057585.1 Olea europaea HOM05D003047 ORTHO05D000627 2.8e-06 57.0 67 46.3
Potri.010G140700 Populus trichocarpa HOM05D001250 ORTHO05D000627 2.8e-06 57.0 64 46.9
SalBow1G3700 Salvia bowleyana HOM05D003047 ORTHO05D000627 2.8e-06 57.0 49 49.0
vmacro19044 Vaccinium macrocarpon HOM05D000333 ORTHO05D000190 2.8e-06 57.0 98 34.7
Zm00001eb380490 Zea mays HOM05D001250 ORTHO05D000627 2.8e-06 57.0 103 36.9
ATR1125G014 Amborella trichopoda HOM05D001250 ORTHO05D000627 3.7e-06 56.6 105 34.3
CiPaw.04G043200 Carya illinoinensis HOM05D001250 ORTHO05D000627 3.7e-06 56.6 101 33.7
Haze_01086 Corylus avellana HOM05D001250 ORTHO05D000627 3.7e-06 56.6 77 41.6
Manes.02G069800 Manihot esculenta HOM05D001250 ORTHO05D000627 3.7e-06 56.6 78 38.5
Manes.05G093100 Manihot esculenta HOM05D001250 ORTHO05D000627 3.7e-06 56.6 81 37.0
Peaxi162Scf00481g00052 Petunia axillaris HOM05D003047 ORTHO05D000627 3.7e-06 56.6 40 60.0
PGR102G0206 Punica granatum HOM05D001250 ORTHO05D000627 3.7e-06 56.6 86 36.0
Sp5g21940 Schrenkiella parvula HOM05D001250 ORTHO05D000627 3.7e-06 56.6 78 37.2
Atru.chr1.1660 Acer truncatum HOM05D001250 ORTHO05D000627 4.8e-06 56.2 99 33.3
BcaNung06252 Brassica carinata HOM05D001250 ORTHO05D000627 4.8e-06 56.2 78 37.2
C06p43190 Brassica napus HOM05D001250 ORTHO05D000627 4.8e-06 56.2 78 37.2
C08p13710 Brassica napus HOM05D001250 ORTHO05D000627 4.8e-06 56.2 89 37.1
BolC8t49007H Brassica oleracea HOM05D001250 ORTHO05D000627 4.8e-06 56.2 89 37.1
BraA02t04887Z Brassica rapa HOM05D003047 ORTHO05D000627 4.8e-06 56.2 81 39.5
CAN.G159.18 Capsicum annuum HOM05D001250 ORTHO05D000627 4.8e-06 56.2 51 49.0
Cpa.g.sc9.98 Carica papaya HOM05D001250 ORTHO05D000627 4.8e-06 56.2 65 46.2
CsaV3_7G029780 Cucumis sativus L. HOM05D001250 ORTHO05D000627 4.8e-06 56.2 98 33.7
Duzib211G0083 Durio zibethinus HOM05D001250 ORTHO05D000627 4.8e-06 56.2 72 40.3
Gorai.011G195500 Gossypium raimondii HOM05D001250 ORTHO05D000627 4.8e-06 56.2 72 44.4
PGR119G2547 Punica granatum HOM05D001250 ORTHO05D000627 4.8e-06 56.2 67 46.3
Sed0007490 Sechium edule HOM05D000333 ORTHO05D000190 4.8e-06 56.2 60 43.3
AL6G16740 Arabidopsis lyrata HOM05D003047 ORTHO05D000627 6.3e-06 55.8 45 51.1
AT5G06650 Arabidopsis thaliana HOM05D003047 ORTHO05D000627 6.3e-06 55.8 45 51.1
A07p33740 Brassica napus HOM05D001250 ORTHO05D000627 6.3e-06 55.8 78 37.2
BolC6t39121H Brassica oleracea HOM05D001250 ORTHO05D000627 6.3e-06 55.8 78 37.2
DCAR_026559 Daucus carota HOM05D001250 ORTHO05D000627 6.3e-06 55.8 40 60.0
Eucgr.B02564 Eucalyptus grandis HOM05D001250 ORTHO05D000627 6.3e-06 55.8 50 48.0
Gohir.D12G147000 Gossypium hirsutum HOM05D001250 ORTHO05D000627 6.3e-06 55.8 46 52.2
Gorai.008G158200 Gossypium raimondii HOM05D001250 ORTHO05D000627 6.3e-06 55.8 46 52.2
HanXRQChr15g0477591 Helianthus annuus HOM05D001250 ORTHO05D000627 6.3e-06 55.8 42 54.8
Lsat_1_v5_gn_4_73321 Lactuca sativa HOM05D007129 ORTHO05D008680 6.3e-06 55.8 111 34.2
Nn3g17902 Nelumbo nucifera HOM05D001250 ORTHO05D000627 6.3e-06 55.8 86 37.2
Nitab4.5_0000257g0090 Nicotiana tabacum HOM05D001250 ORTHO05D000627 6.3e-06 55.8 49 51.0
Nitab4.5_0010523g0020 Nicotiana tabacum HOM05D001250 ORTHO05D000627 6.3e-06 55.8 49 51.0
PGR004G1520 Punica granatum HOM05D001250 ORTHO05D000627 6.3e-06 55.8 91 35.2
Sabra10G0108700 Salix brachista HOM05D001250 ORTHO05D000627 6.3e-06 55.8 64 48.4
PGSC0003DMG400014990 Solanum tuberosum HOM05D001250 ORTHO05D000627 6.3e-06 55.8 39 61.5
CAN.G610.60 Capsicum annuum HOM05D001250 ORTHO05D000627 8.2e-06 55.5 80 38.8
CAN.G610.61 Capsicum annuum HOM05D001250 ORTHO05D000627 8.2e-06 55.5 83 36.1
Cfa005845 Carpinus fangiana HOM05D001250 ORTHO05D000627 8.2e-06 55.5 67 41.8
CiPaw.01G142100 Carya illinoinensis HOM05D001250 ORTHO05D000627 8.2e-06 55.5 67 43.3
COL.COLO4_04323 Corchorus olitorius HOM05D001250 ORTHO05D000627 8.2e-06 55.5 80 36.2
Eucgr.B03372 Eucalyptus grandis HOM05D001250 ORTHO05D000627 8.2e-06 55.5 50 48.0
Nn4g23905 Nelumbo nucifera HOM05D001250 ORTHO05D000627 8.2e-06 55.5 86 37.2
Nitab4.5_0007813g0010 Nicotiana tabacum HOM05D003047 ORTHO05D000627 8.2e-06 55.5 42 52.4
Phvul.008G007400 Phaseolus vulgaris HOM05D001250 ORTHO05D000627 8.2e-06 55.5 78 37.2
Sabra08G0093400 Salix brachista HOM05D001250 ORTHO05D000627 8.2e-06 55.5 167 27.5
SHI30070 Sapria himalayana HOM05D003047 ORTHO05D000627 8.2e-06 55.5 72 40.3
Solyc05g009180.1 Solanum lycopersicum HOM05D001250 ORTHO05D000627 8.2e-06 55.5 76 39.5
Sopen05g004900 Solanum pennellii HOM05D001250 ORTHO05D000627 8.2e-06 55.5 76 39.5
PGSC0003DMG400014553 Solanum tuberosum HOM05D001250 ORTHO05D000627 8.2e-06 55.5 76 39.5
SGA_v2.0_scaffold105G30507 Striga asiatica HOM05D003047 ORTHO05D000627 8.2e-06 55.5 58 41.4
SGA_v2.0_scaffold274G46500 Striga asiatica HOM05D003047 ORTHO05D000627 8.2e-06 55.5 75 36.0
unitig_22.g6865 Utricularia gibba HOM05D001250 ORTHO05D000627 8.2e-06 55.5 54 50.0


User provided reference genes

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