Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g8536 Utricularia gibba HOM05D005116 ORTHO05D005937 1.1e-159 566.6 298 100.0
Migut.M00082 Erythranthe guttata HOM05D005116 ORTHO05D005937 5.9e-76 288.5 327 55.7
SalBow7G1661 Salvia bowleyana HOM05D002934 ORTHO05D003937 1.5e-68 263.8 352 48.6
Solyc07g053860.3 Solanum lycopersicum HOM05D005116 ORTHO05D005937 2.6e-68 263.1 353 51.0
Sopen07g027830 Solanum pennellii HOM05D005116 ORTHO05D005937 1.1e-66 257.7 358 49.7
SGA_v2.0_scaffold108G30901 Striga asiatica HOM05D005116 ORTHO05D005937 2.2e-62 243.4 333 46.8
CANSAT64G0665 Cannabis sativa HOM05D005116 ORTHO05D005937 3.7e-62 242.7 370 43.0
TWI59G1245 Tripterygium wilfordii HOM05D005116 ORTHO05D005937 2.4e-61 240.0 193 65.3
Glyma.12G116000 Glycine max HOM05D005116 ORTHO05D005937 3.5e-60 236.1 370 44.3
CSS0036411 Camellia sinensis var. sinensis HOM05D005116 ORTHO05D005937 5.9e-60 235.3 205 63.4
CSS0044850 Camellia sinensis var. sinensis HOM05D005116 ORTHO05D005937 7.7e-60 235.0 205 62.9
Potri.017G012500 Populus trichocarpa HOM05D005116 ORTHO05D005937 1.0e-59 234.6 196 62.8
TAR627G0112 Trochodendron aralioides HOM05D005116 ORTHO05D005937 1.0e-59 234.6 235 55.3
Atru.chr6.2899 Acer truncatum HOM05D005116 ORTHO05D005937 1.3e-59 234.2 223 56.5
Actinidia11017 Actinidia chinensis HOM05D005116 ORTHO05D005937 1.7e-59 233.8 382 41.4
FvH4_5g30750 Fragaria vesca HOM05D005116 ORTHO05D005937 1.7e-59 233.8 373 43.2
MBI07_g40350_MAGBIO Magnolia biondii HOM05D005116 ORTHO05D005937 1.7e-59 233.8 340 45.0
DCAR_013025 Daucus carota HOM05D005116 ORTHO05D005937 2.2e-59 233.4 222 55.0
PSO210G2339 Papaver somniferum HOM05D005116 ORTHO05D005937 2.9e-59 233.0 369 43.6
PSO832G2322 Papaver somniferum HOM05D005116 ORTHO05D005937 5.0e-59 232.3 367 43.1
Thecc.06G001400 Theobroma cacao HOM05D005116 ORTHO05D005937 8.5e-59 231.5 222 57.2
Sc09g0004750 Simmondsia chinensis HOM05D005116 ORTHO05D005937 1.5e-58 230.7 356 43.8
TAR629G1139 Trochodendron aralioides HOM05D005116 ORTHO05D005937 1.9e-58 230.3 235 55.7
Dinv13395 Davidia involucrata HOM05D005116 ORTHO05D005937 3.2e-58 229.6 216 58.3
MD09G1244900 Malus domestica HOM05D005116 ORTHO05D005937 4.2e-58 229.2 264 51.9
Duzib052G0489 Durio zibethinus HOM05D005116 ORTHO05D005937 5.5e-58 228.8 232 55.6
GSVIVG01020569001 Vitis vinifera HOM05D005116 ORTHO05D005937 5.5e-58 228.8 239 55.2
EL10Ac5g11143 Beta vulgaris HOM05D005116 ORTHO05D005937 9.4e-58 228.0 351 43.3
Gohir.A01G018800 Gossypium hirsutum HOM05D005116 ORTHO05D005937 9.4e-58 228.0 205 60.5
Lalb_Chr03g0029531 Lupinus albus HOM05D005116 ORTHO05D005937 1.2e-57 227.6 256 50.8
Duzib248G1083 Durio zibethinus HOM05D005116 ORTHO05D005937 2.7e-57 226.5 210 56.7
Ciclev10015278m.g Citrus clementina HOM05D005116 ORTHO05D005937 3.6e-57 226.1 396 39.4
Sed0010367 Sechium edule HOM05D005116 ORTHO05D005937 4.7e-57 225.7 204 57.4
Aqoxy4G00731 Aquilegia oxysepala HOM05D005116 ORTHO05D005937 6.1e-57 225.3 358 42.2
CsaV3_6G012810 Cucumis sativus L. HOM05D005116 ORTHO05D005937 6.1e-57 225.3 204 58.8
Gohir.D01G017400 Gossypium hirsutum HOM05D005116 ORTHO05D005937 6.1e-57 225.3 205 59.5
Manes.13G144900 Manihot esculenta HOM05D005116 ORTHO05D005937 6.1e-57 225.3 200 60.0
Gorai.002G019600 Gossypium raimondii HOM05D005116 ORTHO05D005937 1.0e-56 224.6 266 50.8
Ciclev10015471m.g Citrus clementina HOM05D005116 ORTHO05D005937 2.3e-56 223.4 229 52.8
FAN13G1308 Fragaria x ananassa HOM05D005116 ORTHO05D005937 2.3e-56 223.4 244 53.3
Prupe.4G278300 Prunus persica HOM05D005116 ORTHO05D005937 2.3e-56 223.4 260 50.4
Sc09g0006700 Simmondsia chinensis HOM05D005116 ORTHO05D005937 3.0e-56 223.0 250 50.8
RcHm_v2.0_Chr7g0225641 Rosa chinensis HOM05D005116 ORTHO05D005937 4.0e-56 222.6 380 41.1
Hund01029 Selenicereus undatus HOM05D005116 ORTHO05D005937 4.0e-56 222.6 239 53.1
Ah.09g227990 Amaranthus hybridus HOM05D005116 ORTHO05D005937 5.2e-56 222.2 201 59.2
arahy.Tifrunner.gnm1.ann1.KES1NF Arachis hypogaea HOM05D005116 ORTHO05D005937 5.2e-56 222.2 367 41.7
Eucgr.A01831 Eucalyptus grandis HOM05D005116 ORTHO05D005937 5.2e-56 222.2 258 49.6
RcHm_v2.0_Chr4g0410421 Rosa chinensis HOM05D005116 ORTHO05D005937 5.2e-56 222.2 374 40.9
FAN18G1308 Fragaria x ananassa HOM05D005116 ORTHO05D005937 6.7e-56 221.9 236 54.2
CAN.G209.35 Capsicum annuum HOM05D005116 ORTHO05D005937 8.8e-56 221.5 370 42.4
arahy.Tifrunner.gnm1.ann1.3GE2A8 Arachis hypogaea HOM05D005116 ORTHO05D005937 1.5e-55 220.7 367 41.4
CiPaw.03G178700 Carya illinoinensis HOM05D005116 ORTHO05D005937 2.0e-55 220.3 204 56.4
AUR62029845 Chenopodium quinoa HOM05D005116 ORTHO05D005937 2.0e-55 220.3 371 42.9
ClCG02G017750 Citrullus lanatus HOM05D005116 ORTHO05D005937 2.0e-55 220.3 203 58.6
MELO3C013631.2 Cucumis melo HOM05D005116 ORTHO05D005937 5.7e-55 218.8 204 56.9
Cpa.g.sc83.62 Carica papaya HOM05D005116 ORTHO05D005937 7.5e-55 218.4 239 52.3
ECA234G2480 Erigeron canadensis HOM05D005116 ORTHO05D005937 9.7e-55 218.0 374 40.4
HanXRQChr16g0525341 Helianthus annuus HOM05D005116 ORTHO05D005937 1.3e-54 217.6 376 39.4
COL.COLO4_05946 Corchorus olitorius HOM05D005116 ORTHO05D005937 2.2e-54 216.9 396 40.9
Phvul.011G115315 Phaseolus vulgaris HOM05D005116 ORTHO05D005937 3.7e-54 216.1 228 53.9
Rhsim06G0139500 Rhododendron simsii HOM05D005116 ORTHO05D005937 1.1e-53 214.5 202 56.4
RhsimUnG0145200 Rhododendron simsii HOM05D005116 ORTHO05D005937 1.1e-53 214.5 202 56.4
ATR0763G277 Amborella trichopoda HOM05D005116 ORTHO05D005937 2.4e-53 213.4 223 54.7
HPP92_007017 Vanilla planifolia HOM05D005116 ORTHO05D005937 3.1e-53 213.0 204 55.4
Ca_18939_v3 Cicer arietinum L. HOM05D005116 ORTHO05D005937 2.0e-52 210.3 355 39.4
PGR042G3305 Punica granatum HOM05D005116 ORTHO05D005937 2.7e-52 209.9 237 51.5
HanXRQChr15g0470251 Helianthus annuus HOM05D005116 ORTHO05D005937 4.5e-52 209.1 372 39.0
Cc00_g12320 Coffea canephora HOM05D005116 ORTHO05D005937 2.9e-51 206.5 269 49.8
Lj3g0009567 Lotus japonicus HOM05D005116 ORTHO05D005937 3.8e-51 206.1 205 54.6
Aa31LG1G8970 Aethionema arabicum HOM05D005116 ORTHO05D005937 8.5e-51 204.9 205 51.2
Sabra17G0010300 Salix brachista HOM05D005116 ORTHO05D005937 1.1e-50 204.5 190 58.4
THA.LOC104801168 Tarenaya hassleriana HOM05D005116 ORTHO05D005937 3.2e-50 203.0 289 42.6
SEGI_12795 Sequoiadendron giganteum HOM05D005116 ORTHO05D005937 5.5e-50 202.2 276 43.5
SEGI_15947 Sequoiadendron giganteum HOM05D005116 ORTHO05D005937 5.5e-50 202.2 276 43.5
VMungo1127G1891 Vigna mungo HOM05D005116 ORTHO05D005937 7.2e-50 201.8 232 48.7
vmacro15911 Vaccinium macrocarpon HOM05D005116 ORTHO05D005937 2.7e-49 199.9 158 62.7
Thhalv10007808m.g Eutrema salsugineum HOM05D005116 ORTHO05D005937 3.6e-49 199.5 398 36.2
Nitab4.5_0006721g0020 Nicotiana tabacum HOM05D005116 ORTHO05D005937 1.0e-48 198.0 352 41.8
Carub.0001s0286 Capsella rubella HOM05D005116 ORTHO05D005937 8.8e-48 194.9 201 51.2
Nitab4.5_0004959g0030 Nicotiana tabacum HOM05D005116 ORTHO05D005937 8.8e-48 194.9 350 42.9
Sp1g02620 Schrenkiella parvula HOM05D005116 ORTHO05D005937 8.8e-48 194.9 403 34.5
THA.LOC104826035 Tarenaya hassleriana HOM05D005116 ORTHO05D005937 1.7e-46 190.7 218 48.6
Oeu035627.2 Olea europaea HOM05D005116 ORTHO05D005937 5.4e-45 185.7 360 37.5
QL08p039613 Quercus lobata HOM05D005116 ORTHO05D005937 1.6e-44 184.1 139 66.9
Pp3c13_17680 Physcomitrium patens HOM05D005116 ORTHO05D005937 3.5e-44 183.0 201 50.2
CARHR003090 Cardamine hirsuta HOM05D005116 ORTHO05D005937 1.3e-43 181.0 404 34.4
SMO115G0247 Selaginella moellendorffii HOM05D005116 ORTHO05D005937 3.8e-43 179.5 200 50.5
AT1G03760 Arabidopsis thaliana HOM05D005116 ORTHO05D005937 1.1e-42 177.9 306 37.9
Lj8A109T77 Lonicera japonica HOM05D005116 ORTHO05D005937 7.2e-42 175.3 306 41.5
Lsat_1_v5_gn_4_29780 Lactuca sativa HOM05D005116 ORTHO05D005937 9.5e-42 174.9 264 44.7
AL1G13310 Arabidopsis lyrata HOM05D005116 ORTHO05D005937 6.1e-41 172.2 195 46.7
Haze_13200 Corylus avellana HOM05D005116 ORTHO05D005937 8.8e-40 168.3 164 53.7
Medtr4g078505 Medicago truncatula HOM05D005116 ORTHO05D005937 1.2e-39 167.9 359 36.5
Psat7g169080 Pisum sativum HOM05D005116 ORTHO05D005937 2.0e-39 167.2 379 35.4
CDE02G0148 Ceratophyllum demersum HOM05D005116 ORTHO05D005937 2.6e-39 166.8 131 63.4
TPR.G29254 Trifolium pratense HOM05D005116 ORTHO05D005937 4.4e-39 166.0 159 54.1
Mapoly0076s0049 Marchantia polymorpha HOM05D005116 ORTHO05D005937 5.7e-39 165.6 276 37.7
C05p02100 Brassica napus HOM05D005116 ORTHO05D005937 2.4e-37 160.2 353 33.1
BcaNung07372 Brassica carinata HOM05D005116 ORTHO05D005937 5.4e-37 159.1 358 33.5
BolC5t28987H Brassica oleracea HOM05D005116 ORTHO05D005937 9.2e-37 158.3 353 32.6
AUR62025873 Chenopodium quinoa HOM05D005116 ORTHO05D005937 9.2e-37 158.3 371 35.6
PSO478G3970 Papaver somniferum HOM05D005116 ORTHO05D005937 1.6e-36 157.5 199 46.2
BcaC05g24513 Brassica carinata HOM05D005116 ORTHO05D005937 2.7e-36 156.8 352 32.4
BraA10t42497Z Brassica rapa HOM05D005116 ORTHO05D005937 4.5e-36 156.0 357 33.1
Actinidia11090 Actinidia chinensis HOM05D005116 ORTHO05D005937 5.0e-35 152.5 356 35.1
AUR62034810 Chenopodium quinoa HOM05D005116 ORTHO05D005937 2.3e-32 143.7 253 39.5
Zm00001eb142460 Zea mays HOM05D005116 ORTHO05D005937 2.2e-30 137.1 156 50.0
CBR_g73964 Chara braunii HOM05D005116 ORTHO05D005937 1.1e-29 134.8 219 40.6
AagrBONN_evm.TU.Sc2ySwM_344.4439 Anthoceros agrestis HOM05D005116 ORTHO05D005937 2.4e-29 133.7 169 44.4
MSTRG.25027 Avicennia marina HOM05D005116 ORTHO05D005937 2.4e-29 133.7 203 46.3
Peaxi162Scf01415g00032 Petunia axillaris HOM05D005116 ORTHO05D005937 4.1e-29 132.9 312 38.5
Gorai.005G200500 Gossypium raimondii HOM05D005116 ORTHO05D005937 2.3e-27 127.1 218 41.7
A10p02290 Brassica napus HOM05D005116 ORTHO05D005937 6.6e-27 125.6 300 32.3
C04p67500 Brassica napus HOM05D005116 ORTHO05D005937 1.2e-25 121.3 280 33.6
BcaC02g07427 Brassica carinata HOM05D005116 ORTHO05D005937 8.0e-25 118.6 129 44.2
Aqoxy4G00799 Aquilegia oxysepala HOM05D005116 ORTHO05D005937 6.8e-24 115.5 241 39.0
AagrBONN_evm.TU.Sc2ySwM_368.1082 Anthoceros agrestis HOM05D005116 ORTHO05D005937 1.7e-22 110.9 296 30.1
Gohir.D02G178750 Gossypium hirsutum HOM05D005116 ORTHO05D005937 4.1e-21 106.3 237 35.9
Nitab4.5_0001752g0050 Nicotiana tabacum HOM05D005116 ORTHO05D005937 1.2e-20 104.8 121 49.6
BolC4t28247H Brassica oleracea HOM05D005116 ORTHO05D005937 6.0e-20 102.4 261 31.0
Glyma.12G137500 Glycine max HOM05D005116 ORTHO05D005937 8.6e-19 98.6 69 68.1
Os01g0928300 Oryza sativa ssp. japonica HOM05D005116 ORTHO05D005937 1.9e-18 97.4 90 53.3
Cre13.g576350 Chlamydomonas reinhardtii HOM05D005116 ORTHO05D005937 2.1e-17 94.0 158 39.9
Gohir.A03G155650 Gossypium hirsutum HOM05D005116 ORTHO05D005937 1.4e-16 91.3 185 37.3
Nitab4.5_0000638g0150 Nicotiana tabacum HOM05D005116 ORTHO05D005937 4.4e-15 86.3 118 44.9
Lj8C109T10 Lonicera japonica HOM05D005116 ORTHO05D005937 7.5e-15 85.5 63 65.1
C08p00750 Brassica napus HOM05D005116 ORTHO05D031782 8.3e-14 82.0 252 30.6
Oeu044722.1 Olea europaea HOM05D005116 ORTHO05D005937 2.4e-13 80.5 177 33.3
BcaB06g29108 Brassica carinata HOM05D005116 ORTHO05D005937 1.2e-12 78.2 230 30.9
BcaC07g36947 Brassica carinata HOM05D005116 ORTHO05D005937 2.7e-12 77.0 187 31.0
BcaC07g36946 Brassica carinata HOM05D005116 ORTHO05D031782 1.9e-10 70.9 255 28.6
Oeu023568.1 Olea europaea HOM05D005116 ORTHO05D005937 7.3e-10 68.9 45 64.4
C03p22830 Brassica napus HOM05D000229 ORTHO05D005937 9.5e-10 68.6 106 34.9
BcaNung07287 Brassica carinata HOM05D005116 ORTHO05D005937 5.8e-07 59.3 55 50.9
Zm00001eb363750 Zea mays HOM05D005116 ORTHO05D005937 2.2e-06 57.4 276 26.8
Glyma.19G101401 Glycine max HOM05D000147 ORTHO05D005937 2.9e-06 57.0 56 51.8
BolC2t12481H Brassica oleracea HOM05D005116 ORTHO05D005937 8.4e-06 55.5 84 33.3


User provided reference genes

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