Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g8495 Utricularia gibba HOM05D007646 ORTHO05D004022 2.0e-121 439.1 220 100.0
MSTRG.3534 Avicennia marina HOM05D007646 ORTHO05D004022 9.5e-15 84.7 45 80.0
Nn3g18065 Nelumbo nucifera HOM05D007646 ORTHO05D004022 3.6e-14 82.8 45 75.6
MELO3C020311.2 Cucumis melo HOM05D007646 ORTHO05D004022 4.7e-14 82.4 162 36.4
Solyc02g063300.3 Solanum lycopersicum HOM05D007646 ORTHO05D004022 6.2e-14 82.0 74 50.0
Sopen02g014370 Solanum pennellii HOM05D007646 ORTHO05D004022 6.2e-14 82.0 74 50.0
Rhsim10G0078400 Rhododendron simsii HOM05D007646 ORTHO05D004022 1.0e-13 81.3 84 48.8
PGSC0003DMG400010412 Solanum tuberosum HOM05D007646 ORTHO05D004022 1.4e-13 80.9 78 52.6
Manes.02G073800 Manihot esculenta HOM05D007646 ORTHO05D004022 1.8e-13 80.5 71 54.9
TAR629G1988 Trochodendron aralioides HOM05D007646 ORTHO05D004022 6.8e-13 78.6 44 70.5
vmacro05494 Vaccinium macrocarpon HOM05D007646 ORTHO05D004022 6.8e-13 78.6 92 46.7
SGA_v2.0_scaffold329G48872 Striga asiatica HOM05D007646 ORTHO05D004022 1.2e-12 77.8 44 72.7
GSVIVG01030896001 Vitis vinifera HOM05D007646 ORTHO05D004022 7.5e-12 75.1 40 77.5
AL7G52880 Arabidopsis lyrata HOM05D007646 ORTHO05D004022 1.3e-11 74.3 49 65.3
Carub.0005s1235 Capsella rubella HOM05D007646 ORTHO05D004022 1.3e-11 74.3 47 68.1
CDE06G1656 Ceratophyllum demersum HOM05D007646 ORTHO05D004022 1.7e-11 73.9 84 44.0
Thhalv10027987m.g Eutrema salsugineum HOM05D007646 ORTHO05D004022 1.7e-11 73.9 93 48.4
Hma1.2p1_0283F.1_g113630 Hydrangea macrophylla HOM05D007646 ORTHO05D004022 1.7e-11 73.9 44 68.2
CARHR214680 Cardamine hirsuta HOM05D007646 ORTHO05D004022 2.2e-11 73.6 48 66.7
Sp7g04020 Schrenkiella parvula HOM05D007646 ORTHO05D004022 2.2e-11 73.6 49 71.4
THA.LOC104822453 Tarenaya hassleriana HOM05D007646 ORTHO05D004022 2.2e-11 73.6 43 74.4
Cc07_g08290 Coffea canephora HOM05D007646 ORTHO05D004022 2.9e-11 73.2 41 75.6
Haze_14207 Corylus avellana HOM05D007646 ORTHO05D004022 2.9e-11 73.2 42 73.8
Eucgr.F02813 Eucalyptus grandis HOM05D007646 ORTHO05D004022 2.9e-11 73.2 50 68.0
Ciclev10013088m.g Citrus clementina HOM05D007646 ORTHO05D004022 3.7e-11 72.8 37 78.4
Atru.chr1.1768 Acer truncatum HOM05D007646 ORTHO05D004022 4.9e-11 72.4 41 75.6
AT5G38060 Arabidopsis thaliana HOM05D007646 ORTHO05D004022 4.9e-11 72.4 49 63.3
CiPaw.03G067200 Carya illinoinensis HOM05D007646 ORTHO05D004022 4.9e-11 72.4 42 76.2
BcaB02g08021 Brassica carinata HOM05D007646 ORTHO05D004022 6.4e-11 72.0 44 70.5
Cpa.g.sc116.10 Carica papaya HOM05D007646 ORTHO05D004022 8.3e-11 71.6 42 71.4
Potri.017G122500 Populus trichocarpa HOM05D007646 ORTHO05D004022 8.3e-11 71.6 70 52.9
Aa31LG9G17280 Aethionema arabicum HOM05D004323 ORTHO05D004022 1.1e-10 71.2 52 61.5
Cfa007863 Carpinus fangiana HOM05D007646 ORTHO05D004022 1.1e-10 71.2 73 47.9
Lalb_Chr10g0091581 Lupinus albus HOM05D007646 ORTHO05D004022 1.9e-10 70.5 61 55.7
Sabra17G0101300 Salix brachista HOM05D007646 ORTHO05D004022 1.9e-10 70.5 42 73.8
Sabra17G0103900 Salix brachista HOM05D007646 ORTHO05D004022 1.9e-10 70.5 42 73.8
Hund13692 Selenicereus undatus HOM05D007646 ORTHO05D004022 2.4e-10 70.1 85 41.2
TWI77G0633 Tripterygium wilfordii HOM05D007646 ORTHO05D004022 2.4e-10 70.1 67 53.7
ClCG05G010760 Citrullus lanatus HOM05D007646 ORTHO05D004022 3.2e-10 69.7 68 51.5
QL07p035402 Quercus lobata HOM05D007646 ORTHO05D004022 3.2e-10 69.7 37 73.0
SEGI_34374 Sequoiadendron giganteum HOM05D007646 ORTHO05D004022 3.2e-10 69.7 46 65.2
FvH4_4g24890 Fragaria vesca HOM05D007646 ORTHO05D004022 7.0e-10 68.6 119 37.8
FAN07G2610 Fragaria x ananassa HOM05D007646 ORTHO05D004022 7.0e-10 68.6 71 52.1
FAN17G0138 Fragaria x ananassa HOM05D007646 ORTHO05D004022 7.0e-10 68.6 71 52.1
Gohir.D07G080400 Gossypium hirsutum HOM05D007646 ORTHO05D004022 7.0e-10 68.6 30 90.0
Gorai.001G085500 Gossypium raimondii HOM05D007646 ORTHO05D004022 7.0e-10 68.6 30 90.0
Medtr7g082970 Medicago truncatula HOM05D007646 ORTHO05D004022 9.2e-10 68.2 59 57.6
Thecc.04G124000 Theobroma cacao HOM05D007646 ORTHO05D004022 9.2e-10 68.2 56 57.1
HPP92_011530 Vanilla planifolia HOM05D007646 ORTHO05D004022 9.2e-10 68.2 40 70.0
arahy.Tifrunner.gnm1.ann1.27TPXA Arachis hypogaea HOM05D007646 ORTHO05D004022 1.2e-09 67.8 62 53.2
arahy.Tifrunner.gnm1.ann1.FGX6FG Arachis hypogaea HOM05D007646 ORTHO05D004022 1.2e-09 67.8 62 53.2
Manes.01G114800 Manihot esculenta HOM05D007646 ORTHO05D004022 1.2e-09 67.8 56 53.6
FAN12G1679 Fragaria x ananassa HOM05D007646 ORTHO05D004022 1.6e-09 67.4 119 37.0
RcHm_v2.0_Chr3g0493581 Rosa chinensis HOM05D007646 ORTHO05D004022 1.6e-09 67.4 84 44.0
Gohir.A07G075950 Gossypium hirsutum HOM05D007646 ORTHO05D004022 2.0e-09 67.0 30 86.7
Nitab4.5_0000036g0620 Nicotiana tabacum HOM05D007646 ORTHO05D004022 2.0e-09 67.0 56 55.4
EL10Ac2g04503 Beta vulgaris HOM05D007646 ORTHO05D004022 2.7e-09 66.6 92 41.3
Migut.L00480 Erythranthe guttata HOM05D007646 ORTHO05D004022 2.7e-09 66.6 97 40.2
Lsat_1_v5_gn_3_83021 Lactuca sativa HOM05D007646 ORTHO05D004022 2.7e-09 66.6 46 60.9
VMungo1383G0770 Vigna mungo HOM05D007646 ORTHO05D004022 2.7e-09 66.6 41 75.6
HanXRQChr12g0375971 Helianthus annuus HOM05D007646 ORTHO05D004022 3.5e-09 66.2 43 65.1
TPR.G28547 Trifolium pratense HOM05D007646 ORTHO05D004022 3.5e-09 66.2 37 73.0
Psat3g096480 Pisum sativum HOM05D007646 ORTHO05D004022 4.6e-09 65.9 45 62.2
Prupe.3G151500 Prunus persica HOM05D007646 ORTHO05D004022 7.8e-09 65.1 41 68.3
Lj1g0016280 Lotus japonicus HOM05D007646 ORTHO05D004022 1.0e-08 64.7 30 83.3
Phvul.008G009900 Phaseolus vulgaris HOM05D007646 ORTHO05D004022 1.0e-08 64.7 44 68.2
Aqoxy3G00145 Aquilegia oxysepala HOM05D007646 ORTHO05D004022 1.3e-08 64.3 35 74.3
BolC6t36994H Brassica oleracea HOM05D007646 ORTHO05D004022 1.3e-08 64.3 43 62.8
DCAR_010731 Daucus carota HOM05D007646 ORTHO05D004022 1.3e-08 64.3 66 48.5
Sc11g0008560 Simmondsia chinensis HOM05D007646 ORTHO05D004022 1.3e-08 64.3 67 47.8
Zm00001eb042800 Zea mays HOM05D007646 ORTHO05D004022 1.3e-08 64.3 52 55.8
Duzib133G1094 Durio zibethinus HOM05D007646 ORTHO05D004022 2.3e-08 63.5 30 83.3
Glyma.02G091100 Glycine max HOM05D007646 ORTHO05D004022 3.0e-08 63.2 30 80.0
A07p19560 Brassica napus HOM05D007646 ORTHO05D004022 3.9e-08 62.8 44 61.4
BraA07t29660Z Brassica rapa HOM05D007646 ORTHO05D004022 3.9e-08 62.8 44 63.6
BcaC08g44354 Brassica carinata HOM05D007646 ORTHO05D004022 5.0e-08 62.4 43 60.5
C06p17970 Brassica napus HOM05D007646 ORTHO05D004022 5.0e-08 62.4 43 60.5
Os08g0364500 Oryza sativa ssp. japonica HOM05D007646 ORTHO05D004022 5.0e-08 62.4 52 55.8
PSO017G6311 Papaver somniferum HOM05D007646 ORTHO05D004022 5.0e-08 62.4 43 62.8
CANSAT54G0187 Cannabis sativa HOM05D007646 ORTHO05D004022 8.6e-08 61.6 48 62.5
PSO478G0345 Papaver somniferum HOM05D007646 ORTHO05D004022 1.1e-07 61.2 35 71.4
Sed0004781 Sechium edule HOM05D007646 ORTHO05D004022 3.3e-07 59.7 40 65.0
AagrBONN_evm.TU.Sc2ySwM_117.3189 Anthoceros agrestis HOM05D007646 ORTHO05D004022 9.5e-07 58.2 33 69.7
Pp3c20_8520 Physcomitrium patens HOM05D007646 ORTHO05D004022 2.1e-06 57.0 30 70.0
ATR0326G025 Amborella trichopoda HOM05D007646 ORTHO05D004022 3.6e-06 56.2 44 56.8
Mapoly0026s0130 Marchantia polymorpha HOM05D007646 ORTHO05D004022 6.2e-06 55.5 37 56.8


User provided reference genes

Program Settings