Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g8404 Utricularia gibba HOM05D006999 ORTHO05D008936 5.4e-139 497.7 251 100.0
Migut.K00852 Erythranthe guttata HOM05D006999 ORTHO05D008936 1.1e-88 330.5 233 72.5
SalBow1G0035 Salvia bowleyana HOM05D006999 ORTHO05D008936 3.1e-86 322.4 241 68.5
MSTRG.15411 Avicennia marina HOM05D006999 ORTHO05D008936 4.0e-86 322.0 241 67.6
Oeu049309.1 Olea europaea HOM05D006999 ORTHO05D008936 1.7e-84 316.6 236 67.4
Oeu049321.1 Olea europaea HOM05D006999 ORTHO05D008936 2.2e-84 316.2 236 67.4
Dinv39939 Davidia involucrata HOM05D006999 ORTHO05D008936 1.5e-80 303.5 235 65.1
Lj4P134T41 Lonicera japonica HOM05D006999 ORTHO05D008936 3.3e-80 302.4 236 64.4
CSS0003698 Camellia sinensis var. sinensis HOM05D006999 ORTHO05D008936 2.8e-79 299.3 236 64.8
CSS0009159 Camellia sinensis var. sinensis HOM05D006999 ORTHO05D008936 2.8e-79 299.3 236 64.8
Atru.chr3.494 Acer truncatum HOM05D006999 ORTHO05D008936 7.6e-77 291.2 235 62.6
Thecc.01G043300 Theobroma cacao HOM05D006999 ORTHO05D008936 4.9e-76 288.5 236 60.6
Duzib147G0594 Durio zibethinus HOM05D006999 ORTHO05D008936 8.4e-76 287.7 236 60.2
RcHm_v2.0_Chr2g0102951 Rosa chinensis HOM05D006999 ORTHO05D008936 1.1e-75 287.3 236 60.6
CiPaw.01G031400 Carya illinoinensis HOM05D006999 ORTHO05D008936 2.5e-75 286.2 235 60.4
SGA_v2.0_scaffold62G21537 Striga asiatica HOM05D006999 ORTHO05D008936 4.2e-75 285.4 242 61.2
Gohir.A12G066700 Gossypium hirsutum HOM05D006999 ORTHO05D008936 7.1e-75 284.6 234 60.3
Haze_15147 Corylus avellana HOM05D000909 ORTHO05D000928 2.1e-74 283.1 236 59.3
Cc05_g07730 Coffea canephora HOM05D006999 ORTHO05D008936 2.7e-74 282.7 236 60.6
Potri.005G128600 Populus trichocarpa HOM05D006999 ORTHO05D008936 2.7e-74 282.7 233 59.2
Gorai.008G070500 Gossypium raimondii HOM05D006999 ORTHO05D008936 3.5e-74 282.3 234 59.8
Sabra05G0104700 Salix brachista HOM05D006999 ORTHO05D008936 6.0e-74 281.6 249 56.6
Gohir.D12G067100 Gossypium hirsutum HOM05D006999 ORTHO05D008936 1.8e-73 280.0 234 59.4
Lj2g0003627 Lotus japonicus HOM05D006999 ORTHO05D008936 5.1e-73 278.5 236 59.3
DCAR_026261 Daucus carota HOM05D006999 ORTHO05D008936 6.7e-73 278.1 236 58.9
Dinv29387 Davidia involucrata HOM05D006999 ORTHO05D008936 6.7e-73 278.1 207 66.2
Actinidia36538 Actinidia chinensis HOM05D006999 ORTHO05D008936 1.6e-71 273.5 234 60.7
Eucgr.I02485 Eucalyptus grandis HOM05D006999 ORTHO05D008936 1.6e-71 273.5 236 58.5
Nn5g29479 Nelumbo nucifera HOM05D006999 ORTHO05D008936 1.6e-71 273.5 231 61.0
Cpa.g.sc15.132 Carica papaya HOM05D006999 ORTHO05D008936 2.1e-71 273.1 235 58.3
Manes.13G134700 Manihot esculenta HOM05D006999 ORTHO05D008936 2.8e-71 272.7 236 58.1
GSVIVG01019040001 Vitis vinifera HOM05D006999 ORTHO05D008936 4.8e-71 271.9 236 56.8
QL06p044626 Quercus lobata HOM05D006999 ORTHO05D008936 8.2e-71 271.2 236 57.6
Peaxi162Scf00019g00154 Petunia axillaris HOM05D006999 ORTHO05D008936 4.1e-70 268.9 239 59.0
Cfa004253 Carpinus fangiana HOM05D006999 ORTHO05D008936 1.2e-69 267.3 223 59.2
FvH4_1g14280 Fragaria vesca HOM05D006999 ORTHO05D008936 1.5e-69 266.9 233 56.7
CANSAT01G1763 Cannabis sativa HOM05D006999 ORTHO05D008936 2.6e-69 266.2 232 56.0
Aa31LG1G15180 Aethionema arabicum HOM05D006999 ORTHO05D008936 3.4e-69 265.8 243 57.2
Aqoxy6G01000 Aquilegia oxysepala HOM05D006999 ORTHO05D008936 4.5e-69 265.4 236 57.2
Ca_24822_v3 Cicer arietinum L. HOM05D006999 ORTHO05D008936 5.8e-69 265.0 235 57.0
THA.LOC104826827 Tarenaya hassleriana HOM05D006999 ORTHO05D008936 3.8e-68 262.3 239 56.9
Carub.0008s2788 Capsella rubella HOM05D006999 ORTHO05D008936 3.2e-67 259.2 235 55.7
AT5G66631 Arabidopsis thaliana HOM05D006999 ORTHO05D008936 4.6e-66 255.4 245 53.9
FvH4_2g07140 Fragaria vesca HOM05D006999 ORTHO05D008936 1.0e-65 254.2 214 57.5
MD15G1270900 Malus domestica HOM05D006999 ORTHO05D008936 8.7e-65 251.1 208 58.7
Thhalv10005592m.g Eutrema salsugineum HOM05D006999 ORTHO05D008936 1.6e-63 246.9 235 55.3
TPR.G34465 Trifolium pratense HOM05D006999 ORTHO05D008936 4.8e-63 245.4 237 51.9
AL8G44870 Arabidopsis lyrata HOM05D006999 ORTHO05D008936 6.3e-63 245.0 245 51.4
Sp2g30070 Schrenkiella parvula HOM05D006999 ORTHO05D008936 6.3e-63 245.0 235 54.9
CARHR281110 Cardamine hirsuta HOM05D006999 ORTHO05D008936 4.1e-62 242.3 240 51.7
HPP92_025826 Vanilla planifolia HOM05D006999 ORTHO05D008936 4.1e-62 242.3 231 55.0
TWI73G1021 Tripterygium wilfordii HOM05D006999 ORTHO05D008936 5.3e-62 241.9 235 54.9
BcaC06g34726 Brassica carinata HOM05D006999 ORTHO05D008936 9.0e-62 241.1 236 54.7
HanXRQChr09g0265111 Helianthus annuus HOM05D006999 ORTHO05D008936 9.0e-62 241.1 233 52.4
BraA07t29457Z Brassica rapa HOM05D006999 ORTHO05D008936 1.2e-61 240.7 236 54.7
A07p17310 Brassica napus HOM05D006999 ORTHO05D008936 2.6e-61 239.6 236 54.2
Oeu049317.1 Olea europaea HOM05D006999 ORTHO05D008936 3.4e-61 239.2 170 68.2
BcaB02g10006 Brassica carinata HOM05D006999 ORTHO05D008936 4.5e-61 238.8 236 53.8
Os01g0167750 Oryza sativa ssp. japonica HOM05D006999 ORTHO05D008936 5.9e-61 238.4 251 49.4
BolC7t43049H Brassica oleracea HOM05D006999 ORTHO05D008936 1.0e-60 237.7 236 54.2
Zm00001eb123240 Zea mays HOM05D006999 ORTHO05D008936 1.7e-60 236.9 225 52.0
arahy.Tifrunner.gnm1.ann1.ZB5P2M Arachis hypogaea HOM05D006999 ORTHO05D008936 2.2e-60 236.5 236 51.3
C07p25190 Brassica napus HOM05D006999 ORTHO05D008936 5.0e-60 235.3 236 53.8
Lalb_Chr09g0322731 Lupinus albus HOM05D006999 ORTHO05D008936 3.2e-59 232.6 236 50.4
PSO541G6186 Papaver somniferum HOM05D006999 ORTHO05D008936 8.8e-57 224.6 234 49.6
ATR0782G111 Amborella trichopoda HOM05D006999 ORTHO05D008936 1.1e-54 217.6 243 47.7
Hma1.2p1_2980F.1_g331210 Hydrangea macrophylla HOM05D006999 ORTHO05D008936 5.3e-54 215.3 236 50.0
Nitab4.5_0004292g0030 Nicotiana tabacum HOM05D006999 ORTHO05D008936 2.2e-52 209.9 236 50.4
TAR381G1039 Trochodendron aralioides HOM05D006999 ORTHO05D008936 2.2e-52 209.9 236 49.2
Nitab4.5_0000090g0200 Nicotiana tabacum HOM05D006999 ORTHO05D008936 2.9e-52 209.5 236 50.4
Sopen02g015710 Solanum pennellii HOM05D006999 ORTHO05D008936 5.0e-52 208.8 236 50.8
PGSC0003DMG400001186 Solanum tuberosum HOM05D006999 ORTHO05D008936 6.5e-52 208.4 236 50.8
Solyc02g065510.1 Solanum lycopersicum HOM05D006999 ORTHO05D008936 1.1e-51 207.6 236 50.4
Rhsim02G0229300 Rhododendron simsii HOM05D006999 ORTHO05D008936 5.5e-51 205.3 236 47.9
FAN23G0790 Fragaria x ananassa HOM05D006999 ORTHO05D008936 3.9e-49 199.1 236 46.6
Medtr5g019030 Medicago truncatula HOM05D006999 ORTHO05D008936 3.7e-47 192.6 237 45.6
CAN.G93.18 Capsicum annuum HOM05D006999 ORTHO05D008936 1.4e-46 190.7 236 46.6
Glyma.11G063000 Glycine max HOM05D006999 ORTHO05D008936 1.4e-46 190.7 231 46.3
MBI16_g10978_MAGBIO Magnolia biondii HOM05D006999 ORTHO05D003554 1.8e-46 190.3 237 44.7
SEGI_35610 Sequoiadendron giganteum HOM05D006999 ORTHO05D008936 9.1e-46 188.0 233 45.1
Phvul.002G025400 Phaseolus vulgaris HOM05D006999 ORTHO05D008936 1.6e-45 187.2 233 45.9
ECA232G3871 Erigeron canadensis HOM05D006999 ORTHO05D008936 3.5e-45 186.0 233 43.8
VMungo1215G1670 Vigna mungo HOM05D006999 ORTHO05D008936 1.3e-44 184.1 233 44.2
vmacro00136 Vaccinium macrocarpon HOM05D006999 ORTHO05D008936 3.8e-44 182.6 233 45.1
Rhsim02G0225000 Rhododendron simsii HOM05D006999 ORTHO05D008936 4.7e-42 175.6 145 58.6
Prupe.7G147200 Prunus persica HOM05D006999 ORTHO05D008936 8.0e-42 174.9 236 41.9
Sc03g0001020 Simmondsia chinensis HOM05D006999 ORTHO05D008936 1.4e-41 174.1 249 41.0
Dinv18613 Davidia involucrata HOM05D006999 ORTHO05D008936 7.5e-40 168.3 238 42.0
Dinv26229 Davidia involucrata HOM05D006999 ORTHO05D008936 7.5e-40 168.3 238 42.0
Ciclev10027580m.g Citrus clementina HOM05D006999 ORTHO05D008936 2.8e-39 166.4 132 59.1
CDE01G0819 Ceratophyllum demersum HOM05D006999 ORTHO05D008936 8.2e-39 164.9 153 51.6
Psat2g162640 Pisum sativum HOM05D006999 ORTHO05D008936 1.4e-38 164.1 237 40.5
Glyma.01G179201 Glycine max HOM05D006999 ORTHO05D008936 1.8e-38 163.7 212 44.3
Ah.02g126330 Amaranthus hybridus HOM05D006999 ORTHO05D008936 2.9e-36 156.4 236 39.8
Haze_25752 Corylus avellana HOM05D006999 ORTHO05D008936 5.5e-35 152.1 217 42.9
EL10Ac6g14872 Beta vulgaris HOM05D006999 ORTHO05D008936 1.2e-34 151.0 233 38.2
AUR62008030 Chenopodium quinoa HOM05D006999 ORTHO05D008936 1.6e-34 150.6 233 39.5
HanXRQChr09g0268161 Helianthus annuus HOM05D006999 ORTHO05D008936 2.1e-34 150.2 150 53.3
EL10Ac6g14214 Beta vulgaris HOM05D006999 ORTHO05D008936 3.7e-31 139.4 154 46.8
Actinidia12102 Actinidia chinensis HOM05D006999 ORTHO05D008936 3.0e-25 119.8 153 46.4
RcHm_v2.0_Chr2g0102871 Rosa chinensis HOM05D006999 ORTHO05D008936 4.0e-25 119.4 97 58.8
Cfa021547 Carpinus fangiana HOM05D006999 ORTHO05D008936 2.2e-23 113.6 220 35.5
Cfa003411 Carpinus fangiana HOM05D006999 ORTHO05D008936 1.4e-22 110.9 218 34.4
MD02G1156600 Malus domestica HOM05D006999 ORTHO05D008936 3.3e-11 73.2 98 42.9
Glyma.02G271600 Glycine max HOM05D007173 ORTHO05D009151 4.9e-07 59.3 139 26.6
Nn8g39431 Nelumbo nucifera HOM05D006819 ORTHO05D008763 6.4e-07 58.9 143 30.1
Actinidia20025 Actinidia chinensis HOM05D007173 ORTHO05D009151 1.4e-06 57.8 172 25.0
Aqoxy5G03254 Aquilegia oxysepala HOM05D007173 ORTHO05D009151 1.4e-06 57.8 166 25.3
Lj7P528T36 Lonicera japonica HOM05D007173 ORTHO05D009151 3.2e-06 56.6 167 25.7
SalBow7G3167 Salvia bowleyana HOM05D000424 ORTHO05D000355 3.2e-06 56.6 183 26.2
Lalb_Chr22g0350931 Lupinus albus HOM05D006819 ORTHO05D008763 4.1e-06 56.2 146 26.7
Aqoxy6G01988 Aquilegia oxysepala HOM05D000424 ORTHO05D000355 5.4e-06 55.8 169 24.9
CDE09G1117 Ceratophyllum demersum HOM05D007173 ORTHO05D009151 5.4e-06 55.8 134 26.9
TWI79G0596 Tripterygium wilfordii HOM05D007173 ORTHO05D009151 5.4e-06 55.8 184 25.0
TAR383G0679 Trochodendron aralioides HOM05D007173 ORTHO05D009151 5.4e-06 55.8 169 24.9
Manes.12G158300 Manihot esculenta HOM05D007173 ORTHO05D009151 7.0e-06 55.5 137 24.1
SMO353G0107 Selaginella moellendorffii HOM05D000001 ORTHO05D000003 7.0e-06 55.5 214 23.8
Solyc02g085650.4 Solanum lycopersicum HOM05D001985 ORTHO05D000761 7.0e-06 55.5 177 24.3
TWI36G0926 Tripterygium wilfordii HOM05D000424 ORTHO05D000355 7.0e-06 55.5 125 26.4
CDE02G2213 Ceratophyllum demersum HOM05D007173 ORTHO05D009151 9.2e-06 55.1 169 25.4
Ciclev10000789m.g Citrus clementina HOM05D000424 ORTHO05D000355 9.2e-06 55.1 169 24.9
Sopen02g030210 Solanum pennellii HOM05D004651 ORTHO05D005761 9.2e-06 55.1 119 26.1


User provided reference genes

Program Settings