Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g8367 Utricularia gibba HOM05D003210 ORTHO05D000001 2.5e-144 515.4 256 100.0
SGA_v2.0_scaffold181G39678 Striga asiatica HOM05D003210 ORTHO05D000001 3.2e-46 189.5 173 55.5
MSTRG.6643 Avicennia marina HOM05D003210 ORTHO05D000001 5.4e-46 188.7 171 54.4
SalBow7G0399 Salvia bowleyana HOM05D003210 ORTHO05D000001 2.1e-45 186.8 183 53.6
Oeu040467.2 Olea europaea HOM05D003210 ORTHO05D000001 3.9e-44 182.6 180 52.2
Nitab4.5_0011940g0010 Nicotiana tabacum HOM05D003210 ORTHO05D000001 6.2e-42 175.3 151 53.6
Peaxi162Scf00776g00227 Petunia axillaris HOM05D003210 ORTHO05D000001 3.1e-41 172.9 150 54.7
CAN.G1397.6 Capsicum annuum HOM05D003210 ORTHO05D000001 1.5e-40 170.6 147 53.7
MD09G1122300 Malus domestica HOM05D003210 ORTHO05D000001 1.5e-40 170.6 157 53.5
GSVIVG01030055001 Vitis vinifera HOM05D003210 ORTHO05D000001 2.6e-40 169.9 156 53.2
Solyc07g047820.3 Solanum lycopersicum HOM05D003210 ORTHO05D000001 5.8e-40 168.7 149 53.0
RcHm_v2.0_Chr2g0156641 Rosa chinensis HOM05D003210 ORTHO05D000001 7.6e-40 168.3 158 50.0
Sopen07g024250 Solanum pennellii HOM05D003210 ORTHO05D000001 9.9e-40 167.9 148 52.7
FvH4_6g41080 Fragaria vesca HOM05D003210 ORTHO05D000001 2.2e-39 166.8 179 45.3
Hma1.2p1_1825F.1_g304380 Hydrangea macrophylla HOM05D003210 ORTHO05D000001 2.2e-39 166.8 175 48.6
Hma1.2p1_0133F.1_g061410 Hydrangea macrophylla HOM05D003210 ORTHO05D000001 4.9e-39 165.6 155 52.3
Prupe.3G201200 Prunus persica HOM05D003210 ORTHO05D000001 8.4e-39 164.9 159 52.8
FAN14G2019 Fragaria x ananassa HOM05D003210 ORTHO05D000001 1.1e-38 164.5 179 44.7
TAR629G0622 Trochodendron aralioides HOM05D003210 ORTHO05D000001 3.2e-38 162.9 156 50.6
Nn1g03235 Nelumbo nucifera HOM05D003210 ORTHO05D000001 1.2e-37 161.0 155 49.7
CSS0019582 Camellia sinensis var. sinensis HOM05D003210 ORTHO05D000001 1.6e-37 160.6 133 56.4
CSS0039883 Camellia sinensis var. sinensis HOM05D003210 ORTHO05D000001 2.7e-37 159.8 131 57.3
CiPaw.12G072400 Carya illinoinensis HOM05D003210 ORTHO05D000001 7.9e-37 158.3 166 47.6
Cfa012658 Carpinus fangiana HOM05D003210 ORTHO05D000001 3.9e-36 156.0 150 49.3
Manes.12G061200 Manihot esculenta HOM05D003210 ORTHO05D000001 6.7e-36 155.2 173 48.6
Atru.chr6.3361 Acer truncatum HOM05D003210 ORTHO05D000001 8.7e-36 154.8 191 42.9
Sed0013166 Sechium edule HOM05D003210 ORTHO05D000001 1.5e-35 154.1 174 46.0
Haze_07989 Corylus avellana HOM05D003210 ORTHO05D000001 2.5e-35 153.3 146 49.3
MELO3C024111.2 Cucumis melo HOM05D003210 ORTHO05D000001 2.5e-35 153.3 169 47.3
Thecc.01G191200 Theobroma cacao HOM05D003210 ORTHO05D000001 2.5e-35 153.3 156 48.1
ClCG02G002730 Citrullus lanatus HOM05D003210 ORTHO05D000001 4.3e-35 152.5 154 50.0
CsaV3_7G023730 Cucumis sativus L. HOM05D003210 ORTHO05D000001 7.4e-35 151.8 169 46.7
THA.LOC104819041 Tarenaya hassleriana HOM05D003210 ORTHO05D000001 1.3e-34 151.0 187 41.2
Ciclev10014182m.g Citrus clementina HOM05D003210 ORTHO05D000001 1.6e-34 150.6 157 49.7
vmacro12101 Vaccinium macrocarpon HOM05D003210 ORTHO05D000001 2.1e-34 150.2 157 48.4
TWI18G1117 Tripterygium wilfordii HOM05D003210 ORTHO05D000001 6.2e-34 148.7 155 45.2
Rhsim06G0174500 Rhododendron simsii HOM05D003210 ORTHO05D000001 5.3e-33 145.6 158 46.8
CsaV3_7G021590 Cucumis sativus L. HOM05D003210 ORTHO05D000001 9.0e-33 144.8 168 45.2
Sc06g0009870 Simmondsia chinensis HOM05D003210 ORTHO05D000001 2.0e-32 143.7 165 44.2
FAN05G1838 Fragaria x ananassa HOM05D003210 ORTHO05D000001 2.2e-31 140.2 118 52.5
Eucgr.K00651 Eucalyptus grandis HOM05D003210 ORTHO05D000001 3.8e-31 139.4 176 40.3
FAN02G2842 Fragaria x ananassa HOM05D003210 ORTHO05D000001 1.9e-30 137.1 118 50.8
HanXRQChr03g0075201 Helianthus annuus HOM05D003210 ORTHO05D000001 3.2e-30 136.3 155 40.6
PSO541G3269 Papaver somniferum HOM05D003210 ORTHO05D000001 1.2e-29 134.4 152 46.1
FAN09G1124 Fragaria x ananassa HOM05D003210 ORTHO05D000001 1.6e-29 134.0 118 50.0
AUR62015034 Chenopodium quinoa HOM05D003210 ORTHO05D000001 2.1e-29 133.7 197 40.1
PSO675G6229 Papaver somniferum HOM05D003210 ORTHO05D000001 6.0e-29 132.1 152 46.1
AUR62017491 Chenopodium quinoa HOM05D003210 ORTHO05D000001 1.5e-27 127.5 197 38.1
ATR0712G112 Amborella trichopoda HOM05D003210 ORTHO05D000001 4.3e-27 125.9 156 41.7
PGR142G4479 Punica granatum HOM05D003210 ORTHO05D000001 2.8e-26 123.2 150 43.3
MBI19_g25583_MAGBIO Magnolia biondii HOM05D003210 ORTHO05D000001 4.8e-26 122.5 158 39.2
SHI10143 Sapria himalayana HOM05D003210 ORTHO05D000001 2.6e-24 116.7 155 42.6
COL.COLO4_08492 Corchorus olitorius HOM05D003210 ORTHO05D000001 1.1e-19 101.3 90 53.3
HPP92_009567 Vanilla planifolia HOM05D003210 ORTHO05D000001 1.5e-19 100.9 148 39.2
Hma1.2p1_0133F.1_g061420 Hydrangea macrophylla HOM05D003210 ORTHO05D000001 7.4e-19 98.6 84 54.8
MELO3C013188.2 Cucumis melo HOM05D003210 ORTHO05D000001 1.6e-18 97.4 154 37.7
Nitab4.5_0000441g0020 Nicotiana tabacum HOM05D003210 ORTHO05D000001 1.6e-18 97.4 79 55.7
TAR625G1193 Trochodendron aralioides HOM05D003210 ORTHO05D000001 1.6e-18 97.4 168 36.3
Ah.15g091280 Amaranthus hybridus HOM05D003210 ORTHO05D000001 2.4e-17 93.6 108 39.8
ATR0665G178 Amborella trichopoda HOM05D003210 ORTHO05D000001 3.1e-17 93.2 132 37.9
Ciclev10018770m.g Citrus clementina HOM05D003210 ORTHO05D000001 5.3e-17 92.4 176 33.0
TAR381G0732 Trochodendron aralioides HOM05D003210 ORTHO05D000001 1.5e-16 90.9 169 33.7
SEGI_11288 Sequoiadendron giganteum HOM05D003210 ORTHO05D000001 4.5e-16 89.4 158 31.6
DCAR_012908 Daucus carota HOM05D003210 ORTHO05D000001 5.9e-16 89.0 84 51.2
DCAR_012925 Daucus carota HOM05D003210 ORTHO05D000001 5.9e-16 89.0 84 51.2
Thecc.01G088700 Theobroma cacao HOM05D003210 ORTHO05D000001 1.0e-15 88.2 192 32.3
Manes.12G124600 Manihot esculenta HOM05D003210 ORTHO05D000001 1.7e-15 87.4 186 32.3
SEGI_31076 Sequoiadendron giganteum HOM05D003210 ORTHO05D000001 1.7e-15 87.4 159 30.8
Haze_03893 Corylus avellana HOM05D003210 ORTHO05D000001 5.0e-15 85.9 182 31.3
Gohir.D12G079600 Gossypium hirsutum HOM05D003210 ORTHO05D000001 1.4e-14 84.3 176 34.1
PGR102G2337 Punica granatum HOM05D003210 ORTHO05D000001 1.4e-14 84.3 170 32.4
QL04p021900 Quercus lobata HOM05D003210 ORTHO05D000001 1.4e-14 84.3 83 44.6
Gohir.A12G085200 Gossypium hirsutum HOM05D003210 ORTHO05D000001 1.9e-14 84.0 176 34.1
Gorai.008G093300 Gossypium raimondii HOM05D003210 ORTHO05D000001 2.5e-14 83.6 176 34.1
Sed0026111 Sechium edule HOM05D003210 ORTHO05D000001 5.5e-14 82.4 153 33.3
SGA_v2.0_scaffold181G39736 Striga asiatica HOM05D003210 ORTHO05D000001 9.4e-14 81.6 159 32.7
Sc16g0000610 Simmondsia chinensis HOM05D003210 ORTHO05D000001 1.2e-13 81.3 174 32.8
Atru.chr4.1465 Acer truncatum HOM05D003210 ORTHO05D000001 1.6e-13 80.9 176 27.8
Duzib264G1117 Durio zibethinus HOM05D003210 ORTHO05D000001 1.6e-13 80.9 164 32.3
PGSC0003DMG401028232 Solanum tuberosum HOM05D003210 ORTHO05D000001 3.6e-13 79.7 183 31.1
THA.LOC104808438 Tarenaya hassleriana HOM05D003210 ORTHO05D000001 4.6e-13 79.3 160 31.2
AL8G43160 Arabidopsis lyrata HOM05D003210 ORTHO05D000001 6.1e-13 79.0 199 30.2
AT5G65560 Arabidopsis thaliana HOM05D003210 ORTHO05D000001 6.1e-13 79.0 199 29.6
Solyc10g081880.3 Solanum lycopersicum HOM05D003210 ORTHO05D000001 6.1e-13 79.0 203 30.0
SHI21874 Sapria himalayana HOM05D003210 ORTHO05D000001 7.9e-13 78.6 137 32.8
Hund03005 Selenicereus undatus HOM05D003210 ORTHO05D000001 7.9e-13 78.6 198 25.8
Sopen10g032390 Solanum pennellii HOM05D003210 ORTHO05D000001 7.9e-13 78.6 187 30.5
GSVIVG01038280001 Vitis vinifera HOM05D003210 ORTHO05D000001 7.9e-13 78.6 168 31.0
Aqoxy6G00832 Aquilegia oxysepala HOM05D003210 ORTHO05D000001 1.0e-12 78.2 193 29.0
MBI16_g31256_MAGBIO Magnolia biondii HOM05D003210 ORTHO05D000001 1.0e-12 78.2 159 30.2
Eucgr.H02438 Eucalyptus grandis HOM05D003210 ORTHO05D000001 1.4e-12 77.8 157 31.8
Lsat_1_v5_gn_9_104601 Lactuca sativa HOM05D003210 ORTHO05D000001 2.3e-12 77.0 75 45.3
Dinv24763 Davidia involucrata HOM05D003210 ORTHO05D000001 3.9e-12 76.3 64 54.7
Migut.H02282 Erythranthe guttata HOM05D003210 ORTHO05D000001 3.9e-12 76.3 175 28.6
Oeu017113.2 Olea europaea HOM05D000258 ORTHO05D000001 6.7e-12 75.5 158 31.6
CDE02G4398 Ceratophyllum demersum HOM05D003210 ORTHO05D000001 8.8e-12 75.1 155 29.7
Lalb_Chr19g0125341 Lupinus albus HOM05D003210 ORTHO05D000001 1.1e-11 74.7 193 30.1
Cc03_g12590 Coffea canephora HOM05D003210 ORTHO05D000001 2.0e-11 73.9 197 30.5
Potri.006G124900 Populus trichocarpa HOM05D003210 ORTHO05D000001 2.5e-11 73.6 157 29.9
Psat3g169880 Pisum sativum HOM05D003210 ORTHO05D000001 3.3e-11 73.2 177 31.1
CiPaw.08G142200 Carya illinoinensis HOM05D003210 ORTHO05D000001 4.3e-11 72.8 150 32.0
MD03G1170600 Malus domestica HOM05D003210 ORTHO05D000001 5.7e-11 72.4 137 29.2
Rhsim13G0050100 Rhododendron simsii HOM05D008810 ORTHO05D010971 5.7e-11 72.4 151 27.8
CAN.G674.2 Capsicum annuum HOM05D003210 ORTHO05D000001 9.7e-11 71.6 201 29.4
PGSC0003DMG400023572 Solanum tuberosum HOM05D003210 ORTHO05D000001 1.3e-10 71.2 154 30.5
TWI74G0121 Tripterygium wilfordii HOM05D003210 ORTHO05D000001 1.3e-10 71.2 179 29.1
TWI53G0425 Tripterygium wilfordii HOM05D003210 ORTHO05D000001 1.7e-10 70.9 136 32.4
VMungo1383G3073 Vigna mungo HOM05D003210 ORTHO05D000001 1.7e-10 70.9 181 29.3
Carub.0002s2422 Capsella rubella HOM05D003210 ORTHO05D000001 2.2e-10 70.5 159 30.2
Nn1g08193 Nelumbo nucifera HOM05D008810 ORTHO05D010971 2.2e-10 70.5 153 28.8
Glyma.09G200200 Glycine max HOM05D003210 ORTHO05D000001 2.8e-10 70.1 159 30.8
TWI75G1111 Tripterygium wilfordii HOM05D008810 ORTHO05D010971 2.8e-10 70.1 190 28.4
Lj3C22T6 Lonicera japonica HOM05D003210 ORTHO05D000001 3.7e-10 69.7 198 24.7
Phvul.008G101600 Phaseolus vulgaris HOM05D003210 ORTHO05D000001 6.3e-10 68.9 181 29.3
QL12p037893 Quercus lobata HOM05D003210 ORTHO05D000001 6.3e-10 68.9 159 30.2
Ca_25227_v3 Cicer arietinum L. HOM05D003210 ORTHO05D000001 1.4e-09 67.8 169 30.2
HanXRQChr06g0169331 Helianthus annuus HOM05D003210 ORTHO05D000001 2.4e-09 67.0 152 27.0
vmacro02795 Vaccinium macrocarpon HOM05D008810 ORTHO05D010971 2.4e-09 67.0 155 28.4
Lj2g0010731 Lotus japonicus HOM05D003210 ORTHO05D000001 4.1e-09 66.2 167 29.9
AT1G77340 Arabidopsis thaliana HOM05D003210 ORTHO05D000001 9.1e-09 65.1 128 32.0
Sabra06G0098600 Salix brachista HOM05D003210 ORTHO05D000001 1.2e-08 64.7 193 26.4
PGSC0003DMG400012917 Solanum tuberosum HOM05D003210 ORTHO05D000001 1.2e-08 64.7 158 29.1
TPR.G36733 Trifolium pratense HOM05D003210 ORTHO05D000001 1.2e-08 64.7 157 29.3
FvH4_7g04271 Fragaria vesca HOM05D003210 ORTHO05D000001 3.4e-08 63.2 202 28.2
RcHm_v2.0_Chr1g0329241 Rosa chinensis HOM05D003210 ORTHO05D000001 3.4e-08 63.2 155 29.0
VMungo1215G2034 Vigna mungo HOM05D003210 ORTHO05D000001 4.5e-08 62.8 153 32.0
PSO541G2059 Papaver somniferum HOM05D003210 ORTHO05D000001 7.7e-08 62.0 158 30.4
HanXRQChr08g0232341 Helianthus annuus HOM05D008810 ORTHO05D010971 1.3e-07 61.2 153 26.8
Cc04_g11530 Coffea canephora HOM05D003210 ORTHO05D000001 1.7e-07 60.8 53 54.7
Lalb_Chr09g0325941 Lupinus albus HOM05D003210 ORTHO05D000001 1.7e-07 60.8 188 28.7
Rhsim09G0050900 Rhododendron simsii HOM05D005337 ORTHO05D006567 1.7e-07 60.8 102 35.3
Rhsim09G0051200 Rhododendron simsii HOM05D005337 ORTHO05D006567 1.7e-07 60.8 102 35.3
FAN03G0748 Fragaria x ananassa HOM05D003210 ORTHO05D000001 2.5e-06 57.0 157 29.9
Ah.03g139830 Amaranthus hybridus HOM05D003210 ORTHO05D000001 3.2e-06 56.6 128 28.1
Lsat_1_v5_gn_9_17361 Lactuca sativa HOM05D008810 ORTHO05D010971 3.2e-06 56.6 130 25.4
THA.LOC104802656 Tarenaya hassleriana HOM05D008810 ORTHO05D010971 4.2e-06 56.2 148 26.4
GSVIVG01005921001 Vitis vinifera HOM05D008810 ORTHO05D010971 7.2e-06 55.5 135 27.4
BraA01t04388Z Brassica rapa HOM05D008810 ORTHO05D010971 9.4e-06 55.1 183 25.7
HanXRQChr13g0389361 Helianthus annuus HOM05D000003 ORTHO05D000007 9.4e-06 55.1 57 42.1


User provided reference genes

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