Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g8348 Utricularia gibba HOM05D001530 ORTHO05D004168 2.2e-84 315.5 145 100.0
Migut.G00265 Erythranthe guttata HOM05D001530 ORTHO05D004168 4.3e-72 274.6 143 81.8
Oeu060376.2 Olea europaea HOM05D001530 ORTHO05D004168 3.4e-69 265.0 143 77.6
MSTRG.21830 Avicennia marina HOM05D001530 ORTHO05D004168 3.7e-68 261.5 143 76.9
Nitab4.5_0000267g0060 Nicotiana tabacum HOM05D001530 ORTHO05D004168 3.7e-68 261.5 142 78.2
CAN.G183.29 Capsicum annuum HOM05D001530 ORTHO05D004168 1.4e-67 259.6 142 76.1
Sopen01g031910 Solanum pennellii HOM05D001530 ORTHO05D004168 1.4e-67 259.6 142 76.1
Solyc01g080130.2 Solanum lycopersicum HOM05D001530 ORTHO05D004168 1.9e-67 259.2 142 76.1
Nitab4.5_0000267g0040 Nicotiana tabacum HOM05D001530 ORTHO05D004168 2.4e-67 258.8 142 76.8
Peaxi162Scf00196g00108 Petunia axillaris HOM05D001530 ORTHO05D004168 3.2e-67 258.5 142 78.2
PGSC0003DMG400033109 Solanum tuberosum HOM05D001530 ORTHO05D004168 4.1e-67 258.1 142 75.4
Nitab4.5_0001247g0020 Nicotiana tabacum HOM05D001530 ORTHO05D004168 5.4e-67 257.7 142 77.5
Nitab4.5_0001247g0070 Nicotiana tabacum HOM05D001530 ORTHO05D004168 5.4e-67 257.7 142 76.8
SalBow2G1103 Salvia bowleyana HOM05D001530 ORTHO05D004168 4.6e-66 254.6 143 78.3
SGA_v2.0_scaffold39G15367 Striga asiatica HOM05D001530 ORTHO05D004168 1.3e-65 253.1 143 74.1
SalBow5G3989 Salvia bowleyana HOM05D001530 ORTHO05D004168 3.0e-65 251.9 143 72.7
DCAR_027152 Daucus carota HOM05D001530 ORTHO05D004168 6.6e-65 250.8 142 75.4
vmacro08275 Vaccinium macrocarpon HOM05D001530 ORTHO05D004168 8.6e-65 250.4 142 77.5
MSTRG.3991 Avicennia marina HOM05D001530 ORTHO05D004168 1.1e-64 250.0 142 74.6
SalBow5G2333 Salvia bowleyana HOM05D001530 ORTHO05D004168 1.1e-64 250.0 143 72.0
TWI73G0093 Tripterygium wilfordii HOM05D001530 ORTHO05D004168 1.5e-64 249.6 142 76.8
Cc03_g03110 Coffea canephora HOM05D001530 ORTHO05D004168 1.9e-64 249.2 142 72.5
Rhsim04G0207100 Rhododendron simsii HOM05D001530 ORTHO05D004168 1.9e-64 249.2 142 77.5
Lj6P565T19 Lonicera japonica HOM05D001530 ORTHO05D004168 2.5e-64 248.8 142 73.9
CANSAT78G1099 Cannabis sativa HOM05D001530 ORTHO05D004168 3.3e-64 248.4 143 75.5
Migut.N00152 Erythranthe guttata HOM05D001530 ORTHO05D004168 9.5e-64 246.9 141 73.0
Manes.15G023000 Manihot esculenta HOM05D001530 ORTHO05D004168 9.5e-64 246.9 142 73.9
QL02p054463 Quercus lobata HOM05D001530 ORTHO05D004168 1.6e-63 246.1 142 75.4
Manes.03G184800 Manihot esculenta HOM05D001530 ORTHO05D004168 2.8e-63 245.4 142 73.9
Eucgr.H03601 Eucalyptus grandis HOM05D001530 ORTHO05D004168 4.7e-63 244.6 142 75.4
MD16G1183600 Malus domestica HOM05D001530 ORTHO05D004168 4.7e-63 244.6 142 74.6
QL06p004230 Quercus lobata HOM05D001530 ORTHO05D004168 4.7e-63 244.6 142 74.6
Lsat_1_v5_gn_9_77980 Lactuca sativa HOM05D001530 ORTHO05D004168 6.2e-63 244.2 142 73.9
Lj4g0020072 Lotus japonicus HOM05D001530 ORTHO05D004168 8.1e-63 243.8 142 75.4
DCAR_002415 Daucus carota HOM05D001530 ORTHO05D004168 1.1e-62 243.4 142 71.8
Aqoxy2G03262 Aquilegia oxysepala HOM05D001530 ORTHO05D004168 1.4e-62 243.0 142 71.1
Gohir.D09G053700 Gossypium hirsutum HOM05D001530 ORTHO05D004168 1.4e-62 243.0 142 73.2
SGA_v2.0_scaffold166G38375 Striga asiatica HOM05D001530 ORTHO05D004168 1.4e-62 243.0 142 73.2
CiPaw.01G159900 Carya illinoinensis HOM05D001530 ORTHO05D004168 1.8e-62 242.7 142 72.5
Glyma.15G103900 Glycine max HOM05D001530 ORTHO05D004168 1.8e-62 242.7 142 75.4
Ca_21592_v3 Cicer arietinum L. HOM05D001530 ORTHO05D004168 2.3e-62 242.3 142 75.4
Gorai.006G053500 Gossypium raimondii HOM05D001530 ORTHO05D004168 3.1e-62 241.9 142 73.2
GSVIVG01017887001 Vitis vinifera HOM05D001530 ORTHO05D004168 3.1e-62 241.9 142 73.9
COL.COLO4_21646 Corchorus olitorius HOM05D001530 ORTHO05D004168 4.0e-62 241.5 142 72.5
Migut.G00289 Erythranthe guttata HOM05D001530 ORTHO05D004168 6.8e-62 240.7 124 82.3
Thecc.04G221500 Theobroma cacao HOM05D001530 ORTHO05D004168 6.8e-62 240.7 142 71.8
TAR362G0912 Trochodendron aralioides HOM05D001530 ORTHO05D004168 6.8e-62 240.7 142 73.2
Glyma.17G017200 Glycine max HOM05D001530 ORTHO05D004168 8.9e-62 240.4 142 73.2
Gohir.A09G054800 Gossypium hirsutum HOM05D001530 ORTHO05D004168 8.9e-62 240.4 142 72.5
Sabra08G0159100 Salix brachista HOM05D001530 ORTHO05D004168 8.9e-62 240.4 142 73.2
Actinidia23475 Actinidia chinensis HOM05D001530 ORTHO05D004168 1.2e-61 240.0 142 73.2
Ciclev10006522m.g Citrus clementina HOM05D001530 ORTHO05D004168 1.2e-61 240.0 142 74.6
Haze_00964 Corylus avellana HOM05D001530 ORTHO05D004168 1.2e-61 240.0 142 73.2
MELO3C006569.2 Cucumis melo HOM05D001530 ORTHO05D004168 1.2e-61 240.0 142 75.4
Glyma.07G256900 Glycine max HOM05D001530 ORTHO05D004168 1.5e-61 239.6 142 73.2
Lj6g0001793 Lotus japonicus HOM05D001530 ORTHO05D004168 1.5e-61 239.6 142 73.9
CsaV3_3G013750 Cucumis sativus L. HOM05D001530 ORTHO05D004168 2.0e-61 239.2 142 75.4
Phvul.006G154000 Phaseolus vulgaris HOM05D001530 ORTHO05D004168 2.0e-61 239.2 142 74.6
ClCG05G005450 Citrullus lanatus HOM05D001530 ORTHO05D004168 2.6e-61 238.8 142 75.4
Glyma.13G208900 Glycine max HOM05D001530 ORTHO05D004168 2.6e-61 238.8 142 73.9
MD13G1183000 Malus domestica HOM05D001530 ORTHO05D004168 2.6e-61 238.8 142 71.8
Phvul.003G092800 Phaseolus vulgaris HOM05D001530 ORTHO05D004168 2.6e-61 238.8 142 73.2
CiPaw.02G092300 Carya illinoinensis HOM05D001530 ORTHO05D004168 3.4e-61 238.4 142 73.9
Cpa.g.sc16.25 Carica papaya HOM05D001530 ORTHO05D004168 4.4e-61 238.0 142 71.1
TPR.G20139 Trifolium pratense HOM05D001530 ORTHO05D004168 4.4e-61 238.0 142 73.9
Prupe.1G151300 Prunus persica HOM05D001530 ORTHO05D004168 5.8e-61 237.7 142 74.6
Potri.008G202400 Populus trichocarpa HOM05D001530 ORTHO05D004168 7.5e-61 237.3 142 71.8
Potri.008G202500 Populus trichocarpa HOM05D001530 ORTHO05D004168 7.5e-61 237.3 142 71.8
Sabra10G0011000 Salix brachista HOM05D001530 ORTHO05D004168 7.5e-61 237.3 141 73.0
THA.LOC104802744 Tarenaya hassleriana HOM05D001530 ORTHO05D004168 7.5e-61 237.3 143 69.2
VMungo0540G2153 Vigna mungo HOM05D001530 ORTHO05D004168 7.5e-61 237.3 142 73.9
arahy.Tifrunner.gnm1.ann1.NX75ZF Arachis hypogaea HOM05D001530 ORTHO05D004168 1.7e-60 236.1 142 73.2
Potri.010G030900 Populus trichocarpa HOM05D001530 ORTHO05D004168 1.7e-60 236.1 142 72.5
VMungo1215G0485 Vigna mungo HOM05D001530 ORTHO05D004168 1.7e-60 236.1 142 72.5
BcaC04g18623 Brassica carinata HOM05D001530 ORTHO05D004168 2.2e-60 235.7 143 68.5
CSS0015016 Camellia sinensis var. sinensis HOM05D001530 ORTHO05D004168 2.2e-60 235.7 142 73.9
Thhalv10020342m.g Eutrema salsugineum HOM05D001530 ORTHO05D004168 2.9e-60 235.3 143 70.6
ECA236G2854 Erigeron canadensis HOM05D001530 ORTHO05D004168 3.7e-60 235.0 142 71.1
Solyc01g080120.2 Solanum lycopersicum HOM05D001530 ORTHO05D004168 3.7e-60 235.0 142 68.3
Sopen01g031900 Solanum pennellii HOM05D001530 ORTHO05D004168 3.7e-60 235.0 142 68.3
Sed0015286 Sechium edule HOM05D001530 ORTHO05D004168 4.9e-60 234.6 142 73.2
Aa31LG5G16670 Aethionema arabicum HOM05D001530 ORTHO05D004168 6.4e-60 234.2 143 68.5
Carub.0003s0559 Capsella rubella HOM05D001530 ORTHO05D004168 6.4e-60 234.2 143 69.2
AT3G06150 Arabidopsis thaliana HOM05D001530 ORTHO05D004168 8.3e-60 233.8 143 69.2
CARHR080670 Cardamine hirsuta HOM05D001530 ORTHO05D004168 1.1e-59 233.4 143 69.2
Sed0013287 Sechium edule HOM05D001530 ORTHO05D004168 1.4e-59 233.0 142 71.8
BolC9t58611H Brassica oleracea HOM05D001530 ORTHO05D004168 1.9e-59 232.6 143 67.8
RcHm_v2.0_Chr4g0418361 Rosa chinensis HOM05D001530 ORTHO05D004168 1.9e-59 232.6 142 71.1
AL3G17010 Arabidopsis lyrata HOM05D001530 ORTHO05D004168 2.4e-59 232.3 143 67.8
A10p20630 Brassica napus HOM05D001530 ORTHO05D004168 2.4e-59 232.3 143 67.1
arahy.Tifrunner.gnm1.ann1.T8IATB Arachis hypogaea HOM05D001530 ORTHO05D004168 3.2e-59 231.9 142 69.0
SHI00371 Sapria himalayana HOM05D001530 ORTHO05D004168 3.2e-59 231.9 142 71.8
SHI54791 Sapria himalayana HOM05D001530 ORTHO05D004168 3.2e-59 231.9 142 71.8
C09p57420 Brassica napus HOM05D001530 ORTHO05D004168 4.1e-59 231.5 143 67.1
CARHR193930 Cardamine hirsuta HOM05D001530 ORTHO05D004168 4.1e-59 231.5 143 67.8
FAN22G1949 Fragaria x ananassa HOM05D001530 ORTHO05D004168 4.1e-59 231.5 142 69.0
BcaB08g36621 Brassica carinata HOM05D001530 ORTHO05D004168 5.4e-59 231.1 143 67.1
BraA10t44126Z Brassica rapa HOM05D001530 ORTHO05D004168 5.4e-59 231.1 143 66.4
FvH4_4g14471 Fragaria vesca HOM05D001530 ORTHO05D004168 7.1e-59 230.7 142 69.0
Lalb_Chr07g0177311 Lupinus albus HOM05D001530 ORTHO05D004168 7.1e-59 230.7 142 71.1
Medtr4g117300 Medicago truncatula HOM05D001530 ORTHO05D004168 7.1e-59 230.7 142 71.1
Os05g0396900 Oryza sativa ssp. japonica HOM05D001530 ORTHO05D004168 7.1e-59 230.7 143 66.4
unitig_21.g20131 Utricularia gibba HOM05D001530 ORTHO05D004168 7.1e-59 230.7 143 69.2
BcaC05g29792 Brassica carinata HOM05D001530 ORTHO05D004168 1.2e-58 229.9 143 68.5
A05p41830 Brassica napus HOM05D001530 ORTHO05D004168 1.2e-58 229.9 143 68.5
C05p61080 Brassica napus HOM05D001530 ORTHO05D004168 1.2e-58 229.9 143 68.5
BolC5t34765H Brassica oleracea HOM05D001530 ORTHO05D004168 1.2e-58 229.9 143 68.5
arahy.Tifrunner.gnm1.ann1.6A0E1S Arachis hypogaea HOM05D001530 ORTHO05D004168 1.6e-58 229.6 142 68.3
HanXRQChr06g0181081 Helianthus annuus HOM05D001530 ORTHO05D004168 1.6e-58 229.6 142 69.0
Sp3g05110 Schrenkiella parvula HOM05D001530 ORTHO05D004168 1.6e-58 229.6 143 67.8
BcaC05g30050 Brassica carinata HOM05D001530 ORTHO05D004168 2.1e-58 229.2 143 68.5
BraA05t22902Z Brassica rapa HOM05D001530 ORTHO05D004168 2.1e-58 229.2 143 68.5
AL6G30440 Arabidopsis lyrata HOM05D001530 ORTHO05D004168 3.5e-58 228.4 143 67.1
Lalb_Chr13g0304091 Lupinus albus HOM05D001530 ORTHO05D004168 4.6e-58 228.0 142 68.3
Atru.chr4.2570 Acer truncatum HOM05D001530 ORTHO05D004168 6.0e-58 227.6 143 69.2
Psat4g031480 Pisum sativum HOM05D001530 ORTHO05D004168 7.8e-58 227.3 142 70.4
Zm00001eb287440 Zea mays HOM05D001530 ORTHO05D004168 7.8e-58 227.3 143 65.7
Carub.0006s1738 Capsella rubella HOM05D001530 ORTHO05D004168 1.0e-57 226.9 143 65.7
A03p34540 Brassica napus HOM05D001530 ORTHO05D004168 1.3e-57 226.5 143 68.5
BraA03t12631Z Brassica rapa HOM05D001530 ORTHO05D004168 1.3e-57 226.5 143 68.5
unitig_32.g10798 Utricularia gibba HOM05D001530 ORTHO05D004168 1.3e-57 226.5 143 65.0
Thhalv10013116m.g Eutrema salsugineum HOM05D001530 ORTHO05D004168 1.7e-57 226.1 143 65.7
BcaC01g04327 Brassica carinata HOM05D001530 ORTHO05D004168 2.3e-57 225.7 143 68.5
C03p42010 Brassica napus HOM05D001530 ORTHO05D004168 2.3e-57 225.7 143 68.5
BolC3t16482H Brassica oleracea HOM05D001530 ORTHO05D004168 2.3e-57 225.7 143 68.5
Sp6g25320 Schrenkiella parvula HOM05D001530 ORTHO05D004168 3.0e-57 225.3 143 65.0
Sc19g0004550 Simmondsia chinensis HOM05D001530 ORTHO05D004168 3.9e-57 224.9 141 64.5
unitig_21.g20137 Utricularia gibba HOM05D001530 ORTHO05D004168 3.9e-57 224.9 143 68.5
Medtr4g117290 Medicago truncatula HOM05D001530 ORTHO05D004168 6.6e-57 224.2 142 69.0
unitig_32.g10795 Utricularia gibba HOM05D001530 ORTHO05D004168 1.5e-56 223.0 143 65.0
AT5G19060 Arabidopsis thaliana HOM05D001530 ORTHO05D004168 1.9e-56 222.6 143 63.6
EL10Ac3g06355 Beta vulgaris HOM05D001530 ORTHO05D004168 3.3e-56 221.9 141 66.7
Dinv38393 Davidia involucrata HOM05D001530 ORTHO05D004168 3.3e-56 221.9 125 74.4
PGR004G2377 Punica granatum HOM05D001530 ORTHO05D004168 3.3e-56 221.9 142 67.6
PSO170G0007 Papaver somniferum HOM05D001530 ORTHO05D004168 9.5e-56 220.3 142 67.6
Ah.13g074200 Amaranthus hybridus HOM05D001530 ORTHO05D004168 1.2e-55 219.9 141 63.8
PSO407G0165 Papaver somniferum HOM05D001530 ORTHO05D004168 1.6e-55 219.5 142 66.9
AUR62030083 Chenopodium quinoa HOM05D001530 ORTHO05D004168 2.8e-55 218.8 142 64.1
COL.COLO4_23594 Corchorus olitorius HOM05D001530 ORTHO05D004168 3.6e-55 218.4 142 64.8
unitig_32.g10796 Utricularia gibba HOM05D001530 ORTHO05D004168 3.6e-55 218.4 143 64.3
AUR62038221 Chenopodium quinoa HOM05D001530 ORTHO05D004168 8.1e-55 217.2 142 64.1
Dinv44480 Davidia involucrata HOM05D001530 ORTHO05D004168 3.1e-54 215.3 124 73.4
unitig_32.g10793 Utricularia gibba HOM05D001530 ORTHO05D004168 4.0e-54 214.9 145 64.1
SEGI_10142 Sequoiadendron giganteum HOM05D001530 ORTHO05D004168 8.9e-54 213.8 143 63.6
SEGI_18262 Sequoiadendron giganteum HOM05D001530 ORTHO05D004168 8.9e-54 213.8 143 63.6
CDE05G3357 Ceratophyllum demersum HOM05D001530 ORTHO05D004168 8.4e-52 207.2 142 63.4
ATR0626G152 Amborella trichopoda HOM05D001530 ORTHO05D004168 4.3e-48 194.9 142 62.0
unitig_32.g10794 Utricularia gibba HOM05D001530 ORTHO05D004168 1.2e-47 193.4 130 65.4
Dinv24008 Davidia involucrata HOM05D001530 ORTHO05D004168 3.8e-44 181.8 106 74.5
THA.LOC104820105 Tarenaya hassleriana HOM05D001530 ORTHO05D004168 3.8e-44 181.8 194 47.4
Dinv25146 Davidia involucrata HOM05D001530 ORTHO05D179983 1.1e-43 180.3 105 73.3
Mapoly0039s0009 Marchantia polymorpha HOM05D001530 ORTHO05D004168 3.5e-42 175.3 144 54.2
Mapoly0049s0136 Marchantia polymorpha HOM05D001530 ORTHO05D004168 4.3e-40 168.3 144 53.5
MBI17_g12018_MAGBIO Magnolia biondii HOM05D001530 ORTHO05D004168 2.8e-39 165.6 117 63.2
AagrBONN_evm.TU.Sc2ySwM_117.1317 Anthoceros agrestis HOM05D001530 ORTHO05D004168 8.1e-39 164.1 144 50.0
AagrBONN_evm.TU.Sc2ySwM_117.4099 Anthoceros agrestis HOM05D001530 ORTHO05D004168 8.1e-39 164.1 142 50.0
Mapoly0002s0154 Marchantia polymorpha HOM05D001530 ORTHO05D004168 1.7e-36 156.4 144 50.0
Mapoly0002s0156 Marchantia polymorpha HOM05D001530 ORTHO05D004168 6.4e-36 154.5 144 50.7
SMO118G0134 Selaginella moellendorffii HOM05D001530 ORTHO05D004168 2.4e-35 152.5 142 47.9
Mapoly0110s0020 Marchantia polymorpha HOM05D001530 ORTHO05D004168 5.4e-35 151.4 146 45.9
AagrBONN_evm.TU.Sc2ySwM_228.40 Anthoceros agrestis HOM05D001530 ORTHO05D004168 9.3e-35 150.6 145 51.7
Mapoly0158s0013 Marchantia polymorpha HOM05D001530 ORTHO05D004168 2.1e-34 149.4 144 47.2
AagrBONN_evm.TU.Sc2ySwM_344.4924 Anthoceros agrestis HOM05D001530 ORTHO05D004168 6.0e-34 147.9 143 49.7
Mapoly0002s0157 Marchantia polymorpha HOM05D001530 ORTHO05D004168 8.7e-33 144.1 149 46.3
Dinv18163 Davidia involucrata HOM05D001530 ORTHO05D180530 5.6e-32 141.4 122 54.9
Pp3c16_14180 Physcomitrium patens HOM05D001530 ORTHO05D004168 2.1e-31 139.4 142 49.3
CAN.G183.25 Capsicum annuum HOM05D001530 ORTHO05D004168 2.8e-31 139.0 96 63.5
Mapoly0002s0023 Marchantia polymorpha HOM05D001530 ORTHO05D004168 4.8e-31 138.3 142 47.9
SMO119G0087 Selaginella moellendorffii HOM05D001530 ORTHO05D004168 1.1e-30 137.1 146 46.6
Mapoly0114s0032 Marchantia polymorpha HOM05D001530 ORTHO05D004168 2.4e-30 136.0 145 42.8
SMO144G0128 Selaginella moellendorffii HOM05D001530 ORTHO05D004168 3.1e-30 135.6 145 45.5
Pp3c1_11910 Physcomitrium patens HOM05D001530 ORTHO05D004168 4.0e-30 135.2 161 43.5
SMO232G0071 Selaginella moellendorffii HOM05D001530 ORTHO05D004168 7.6e-29 131.0 146 43.8
SMO144G0046 Selaginella moellendorffii HOM05D001530 ORTHO05D004168 1.4e-27 126.7 146 41.1
Mapoly0027s0157 Marchantia polymorpha HOM05D001530 ORTHO05D004168 3.5e-26 122.1 144 43.1
Nn1g02162 Nelumbo nucifera HOM05D001530 ORTHO05D004168 3.3e-24 115.5 71 70.4
Mapoly0115s0012 Marchantia polymorpha HOM05D001530 ORTHO05D004168 5.3e-22 108.2 144 39.6
MBI17_g40042_MAGBIO Magnolia biondii HOM05D001530 ORTHO05D004168 1.4e-11 73.6 58 60.3
Zm00001eb350530 Zea mays HOM05D001530 ORTHO05D004168 3.0e-09 65.9 55 43.6
Zm00001eb307460 Zea mays HOM05D001530 ORTHO05D004168 8.8e-09 64.3 55 43.6


User provided reference genes

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