Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g8306 Utricularia gibba HOM05D000336 ORTHO05D002705 5.7e-63 244.2 134 100.0
unitig_32.g10850 Utricularia gibba HOM05D000336 ORTHO05D002705 6.8e-24 114.4 72 77.8
PGSC0003DMG400017209 Solanum tuberosum HOM05D000336 ORTHO05D002705 6.2e-17 91.3 112 43.8
Migut.O00843 Erythranthe guttata HOM05D000336 ORTHO05D002705 1.8e-16 89.7 105 46.7
MSTRG.4151 Avicennia marina HOM05D000336 ORTHO05D002705 3.1e-16 89.0 92 53.3
Sopen09g033280 Solanum pennellii HOM05D000336 ORTHO05D002705 4.0e-16 88.6 112 42.9
Cc03_g05840 Coffea canephora HOM05D000336 ORTHO05D002705 5.2e-16 88.2 98 51.0
Glyma.17G182700 Glycine max HOM05D000336 ORTHO05D002705 6.8e-16 87.8 100 45.0
CAN.G220.42 Capsicum annuum HOM05D000336 ORTHO05D002705 2.6e-15 85.9 89 49.4
SalBow3G1252 Salvia bowleyana HOM05D000336 ORTHO05D002705 2.6e-15 85.9 93 51.6
Actinidia35805 Actinidia chinensis HOM05D000336 ORTHO05D002705 4.4e-15 85.1 95 44.2
Phvul.004G074600 Phaseolus vulgaris HOM05D000336 ORTHO05D002705 5.8e-15 84.7 95 45.3
Lj2g0014987 Lotus japonicus HOM05D000336 ORTHO05D002705 9.9e-15 84.0 90 47.8
QL08p056651 Quercus lobata HOM05D000336 ORTHO05D002705 9.9e-15 84.0 90 47.8
Lj6C625G7 Lonicera japonica HOM05D000336 ORTHO05D002705 1.3e-14 83.6 96 44.8
Haze_16925 Corylus avellana HOM05D000336 ORTHO05D002705 2.2e-14 82.8 92 47.8
Peaxi162Scf00602g00315 Petunia axillaris HOM05D000336 ORTHO05D002705 2.2e-14 82.8 114 42.1
Potri.008G043000 Populus trichocarpa HOM05D000336 ORTHO05D002705 2.2e-14 82.8 100 44.0
Lalb_Chr19g0129591 Lupinus albus HOM05D000336 ORTHO05D002705 3.7e-14 82.0 90 45.6
Solyc09g090370.3 Solanum lycopersicum HOM05D000336 ORTHO05D002705 6.4e-14 81.3 112 40.2
Lj6C626G9 Lonicera japonica HOM05D000336 ORTHO05D002705 1.1e-13 80.5 96 44.8
Nitab4.5_0000044g0600 Nicotiana tabacum HOM05D000336 ORTHO05D002705 1.1e-13 80.5 90 46.7
CSS0015604 Camellia sinensis var. sinensis HOM05D000336 ORTHO05D002705 1.4e-13 80.1 98 43.9
CiPaw.02G175600 Carya illinoinensis HOM05D000336 ORTHO05D002705 1.9e-13 79.7 92 46.7
Dinv11796 Davidia involucrata HOM05D000336 ORTHO05D002705 1.9e-13 79.7 99 40.4
Ciclev10031383m.g Citrus clementina HOM05D000336 ORTHO05D002705 2.4e-13 79.3 92 43.5
Cpa.g.sc53.42 Carica papaya HOM05D000336 ORTHO05D002705 4.1e-13 78.6 101 40.6
Eucgr.J01109 Eucalyptus grandis HOM05D000336 ORTHO05D002705 4.1e-13 78.6 113 43.4
TWI34G1554 Tripterygium wilfordii HOM05D000336 ORTHO05D002705 4.1e-13 78.6 105 41.9
Dinv29831 Davidia involucrata HOM05D002401 ORTHO05D006143 9.2e-13 77.4 99 42.4
CSS0016673 Camellia sinensis var. sinensis HOM05D000336 ORTHO05D002705 1.2e-12 77.0 92 44.6
FvH4_7g19980 Fragaria vesca HOM05D000336 ORTHO05D002705 1.2e-12 77.0 89 47.2
FAN03G1721 Fragaria x ananassa HOM05D000336 ORTHO05D002705 1.2e-12 77.0 89 47.2
FAN06G4785 Fragaria x ananassa HOM05D000336 ORTHO05D002705 1.2e-12 77.0 89 47.2
Lsat_1_v5_gn_1_75080 Lactuca sativa HOM05D000336 ORTHO05D002705 1.2e-12 77.0 82 50.0
Lalb_Chr03g0036001 Lupinus albus HOM05D000336 ORTHO05D002705 2.1e-12 76.3 90 43.3
TWI60G1326 Tripterygium wilfordii HOM05D000336 ORTHO05D002705 2.7e-12 75.9 95 43.2
HanXRQChr01g0023221 Helianthus annuus HOM05D000336 ORTHO05D002705 6.0e-12 74.7 89 48.3
Lj1A919T51 Lonicera japonica HOM05D000336 ORTHO05D002705 6.0e-12 74.7 90 42.2
MD01G1111300 Malus domestica HOM05D000336 ORTHO05D002705 6.0e-12 74.7 90 45.6
Actinidia35803 Actinidia chinensis HOM05D000336 ORTHO05D002705 7.8e-12 74.3 77 48.1
Nn2g13023 Nelumbo nucifera HOM05D000336 ORTHO05D002705 7.8e-12 74.3 99 40.4
Sabra08G0029600 Salix brachista HOM05D000336 ORTHO05D002705 1.0e-11 73.9 100 42.0
CANSAT54G2317 Cannabis sativa HOM05D000336 ORTHO05D002705 1.3e-11 73.6 105 42.9
Gohir.D10G215500 Gossypium hirsutum HOM05D000336 ORTHO05D002705 1.3e-11 73.6 93 41.9
Gorai.011G241100 Gossypium raimondii HOM05D000336 ORTHO05D002705 1.3e-11 73.6 93 41.9
Sc05g0003330 Simmondsia chinensis HOM05D000336 ORTHO05D002705 1.3e-11 73.6 94 40.4
Solyc09g015660.4 Solanum lycopersicum HOM05D000336 ORTHO05D002705 1.3e-11 73.6 90 44.4
TPR.G36639 Trifolium pratense HOM05D000336 ORTHO05D002705 1.3e-11 73.6 92 43.5
vmacro00765 Vaccinium macrocarpon HOM05D000336 ORTHO05D002705 1.3e-11 73.6 112 42.0
CANSAT54G1049 Cannabis sativa HOM05D000336 ORTHO05D002705 3.0e-11 72.4 105 42.9
Rhsim04G0175400 Rhododendron simsii HOM05D000336 ORTHO05D002705 3.0e-11 72.4 115 42.6
Sopen09g009860 Solanum pennellii HOM05D000336 ORTHO05D002705 3.9e-11 72.0 83 45.8
TAR633G1495 Trochodendron aralioides HOM05D000336 ORTHO05D002705 5.1e-11 71.6 119 35.3
CiPaw.01G275200 Carya illinoinensis HOM05D000336 ORTHO05D002705 6.6e-11 71.2 95 45.3
Actinidia03034 Actinidia chinensis HOM05D000336 ORTHO05D002705 8.6e-11 70.9 92 42.4
ATR0568G145 Amborella trichopoda HOM05D000336 ORTHO05D002705 8.6e-11 70.9 98 43.9
Hma1.2p1_0385F.1_g141203 Hydrangea macrophylla HOM05D000336 ORTHO05D002705 1.1e-10 70.5 92 41.3
SGA_v2.0_scaffold67G22727 Striga asiatica HOM05D000336 ORTHO05D002705 1.5e-10 70.1 89 44.9
Prupe.2G216800 Prunus persica HOM05D000336 ORTHO05D002705 1.9e-10 69.7 112 41.1
Thecc.02G000600 Theobroma cacao HOM05D000336 ORTHO05D002705 1.9e-10 69.7 94 42.6
Ca_04675_v3 Cicer arietinum L. HOM05D000336 ORTHO05D002705 3.3e-10 68.9 90 37.8
Gohir.A10G207501 Gossypium hirsutum HOM05D000336 ORTHO05D002705 3.3e-10 68.9 93 45.2
Sed0006647 Sechium edule HOM05D000336 ORTHO05D002705 3.3e-10 68.9 93 38.7
COL.COLO4_25018 Corchorus olitorius HOM05D000336 ORTHO05D002705 4.3e-10 68.6 94 42.6
CsaV3_5G025830 Cucumis sativus L. HOM05D000336 ORTHO05D002705 4.3e-10 68.6 94 38.3
Duzib248G0328 Durio zibethinus HOM05D000336 ORTHO05D002705 4.3e-10 68.6 92 41.3
Hund02936 Selenicereus undatus HOM05D000336 ORTHO05D002705 4.3e-10 68.6 106 37.7
Gohir.D12G049300 Gossypium hirsutum HOM05D000336 ORTHO05D002705 9.6e-10 67.4 93 41.9
Gorai.008G052200 Gossypium raimondii HOM05D000336 ORTHO05D002705 9.6e-10 67.4 93 41.9
RcHm_v2.0_Chr1g0363941 Rosa chinensis HOM05D000336 ORTHO05D002705 9.6e-10 67.4 72 50.0
ECA232G3970 Erigeron canadensis HOM05D000336 ORTHO05D002705 1.2e-09 67.0 96 40.6
Aa31LG10G7430 Aethionema arabicum HOM05D000336 ORTHO05D002705 1.6e-09 66.6 95 42.1
Gohir.A12G051100 Gossypium hirsutum HOM05D000336 ORTHO05D002705 1.6e-09 66.6 93 41.9
PGR044G0317 Punica granatum HOM05D000336 ORTHO05D002705 2.1e-09 66.2 105 35.2
Duzib106G1105 Durio zibethinus HOM05D000336 ORTHO05D002705 3.6e-09 65.5 96 43.8
FAN10G2878 Fragaria x ananassa HOM05D000336 ORTHO05D002705 3.6e-09 65.5 89 43.8
Sabra10G0169200 Salix brachista HOM05D000336 ORTHO05D002705 3.6e-09 65.5 93 44.1
arahy.Tifrunner.gnm1.ann1.90FR5C Arachis hypogaea HOM05D000336 ORTHO05D002705 4.7e-09 65.1 71 45.1
Cpa.g.sc30.64 Carica papaya HOM05D000336 ORTHO05D002705 4.7e-09 65.1 113 36.3
DCAR_015307 Daucus carota HOM05D000336 ORTHO05D002705 4.7e-09 65.1 83 43.4
GSVIVG01034328001 Vitis vinifera HOM05D000336 ORTHO05D002705 4.7e-09 65.1 90 42.2
HanXRQChr15g0496731 Helianthus annuus HOM05D000336 ORTHO05D002705 6.2e-09 64.7 87 40.2
PSO063G6258 Papaver somniferum HOM05D000336 ORTHO05D002705 6.2e-09 64.7 109 37.6
FAN25G0380 Fragaria x ananassa HOM05D000336 ORTHO05D002705 8.1e-09 64.3 89 39.3
PSO339G5221 Papaver somniferum HOM05D000336 ORTHO05D002705 8.1e-09 64.3 109 37.6
AL5G32870 Arabidopsis lyrata HOM05D000336 ORTHO05D002705 1.1e-08 63.9 103 39.8
MD10G1224000 Malus domestica HOM05D000336 ORTHO05D002705 1.1e-08 63.9 95 38.9
SalBow3G0905 Salvia bowleyana HOM05D000336 ORTHO05D002705 1.1e-08 63.9 83 43.4
Hund09622 Selenicereus undatus HOM05D000336 ORTHO05D002705 1.1e-08 63.9 92 39.1
Sc20g0007200 Simmondsia chinensis HOM05D000336 ORTHO05D002705 1.1e-08 63.9 97 36.1
COL.COLO4_23722 Corchorus olitorius HOM05D000336 ORTHO05D002705 1.4e-08 63.5 96 42.7
Eucgr.F03534 Eucalyptus grandis HOM05D000336 ORTHO05D002705 1.4e-08 63.5 104 40.4
FAN11G2885 Fragaria x ananassa HOM05D000336 ORTHO05D002705 1.4e-08 63.5 92 38.0
AT3G52280 Arabidopsis thaliana HOM05D000336 ORTHO05D002705 1.8e-08 63.2 103 38.8
arahy.Tifrunner.gnm1.ann1.AFBY4F Arachis hypogaea HOM05D000336 ORTHO05D002705 1.8e-08 63.2 71 45.1
CARHR162040 Cardamine hirsuta HOM05D000336 ORTHO05D002705 1.8e-08 63.2 89 43.8
Psat2g031560 Pisum sativum HOM05D000336 ORTHO05D002705 2.4e-08 62.8 92 41.3
Ca_22535_v3 Cicer arietinum L. HOM05D000336 ORTHO05D002705 3.1e-08 62.4 89 40.4
Cc02_g11410 Coffea canephora HOM05D000336 ORTHO05D002705 3.1e-08 62.4 109 40.4
Gohir.D04G084800 Gossypium hirsutum HOM05D000336 ORTHO05D002705 3.1e-08 62.4 96 43.8
Gorai.012G094500 Gossypium raimondii HOM05D000336 ORTHO05D002705 3.1e-08 62.4 96 43.8
Manes.03G072850 Manihot esculenta HOM05D000336 ORTHO05D002705 3.1e-08 62.4 98 35.7
Medtr6g033375 Medicago truncatula HOM05D000336 ORTHO05D002705 3.1e-08 62.4 72 45.8
VMungo0251G1086 Vigna mungo HOM05D000336 ORTHO05D002705 3.1e-08 62.4 105 34.3
Prupe.4G121200 Prunus persica HOM05D000336 ORTHO05D002705 4.0e-08 62.0 92 40.2
Thecc.10G069700 Theobroma cacao HOM05D000336 ORTHO05D002705 4.0e-08 62.0 96 40.6
Medtr6g045290 Medicago truncatula HOM05D000336 ORTHO05D002705 6.8e-08 61.2 72 45.8
Carub.0005s1864 Capsella rubella HOM05D000336 ORTHO05D002705 1.2e-07 60.5 95 38.9
AUR62010103 Chenopodium quinoa HOM05D000336 ORTHO05D002705 1.5e-07 60.1 92 37.0
Glyma.08G264100 Glycine max HOM05D000336 ORTHO05D002705 1.5e-07 60.1 93 35.5
VMungo0464G0405 Vigna mungo HOM05D000336 ORTHO05D002705 1.5e-07 60.1 93 38.7
Eucgr.G02811 Eucalyptus grandis HOM05D000336 ORTHO05D002705 2.6e-07 59.3 90 40.0
Peaxi162Scf00108g00148 Petunia axillaris HOM05D000336 ORTHO05D002705 2.6e-07 59.3 76 42.1
Nitab4.5_0005460g0050 Nicotiana tabacum HOM05D000336 ORTHO05D002705 3.4e-07 58.9 75 45.3
RcHm_v2.0_Chr5g0022091 Rosa chinensis HOM05D000336 ORTHO05D002705 3.4e-07 58.9 92 38.0
TPR.G19835 Trifolium pratense HOM05D000336 ORTHO05D002705 5.8e-07 58.2 93 35.5
ClCG09G020540 Citrullus lanatus HOM05D000336 ORTHO05D002705 7.6e-07 57.8 94 33.0
MELO3C002885.2 Cucumis melo HOM05D000336 ORTHO05D002705 7.6e-07 57.8 94 33.0
Oeu043923.1 Olea europaea HOM05D000336 ORTHO05D002705 7.6e-07 57.8 66 47.0
unitig_0.g2140 Utricularia gibba HOM05D000336 ORTHO05D002705 1.3e-06 57.0 85 38.8
BraA03t13981Z Brassica rapa HOM05D000336 ORTHO05D002705 1.7e-06 56.6 95 38.9
CDE02G1362 Ceratophyllum demersum HOM05D000336 ORTHO05D002705 1.7e-06 56.6 84 41.7
Manes.07G103100 Manihot esculenta HOM05D000336 ORTHO05D002705 1.7e-06 56.6 90 42.2
QL11p010714 Quercus lobata HOM05D000336 ORTHO05D002705 2.2e-06 56.2 92 37.0
TAR636G0998 Trochodendron aralioides HOM05D000336 ORTHO05D002705 2.2e-06 56.2 106 35.8
SEGI_39566 Sequoiadendron giganteum HOM05D000336 ORTHO05D002705 2.9e-06 55.8 99 39.4
Cfa001168 Carpinus fangiana HOM05D000336 ORTHO05D002705 3.8e-06 55.5 96 38.5
Lj4g0015179 Lotus japonicus HOM05D000336 ORTHO05D002705 3.8e-06 55.5 90 34.4
EL10As5g23511 Beta vulgaris HOM05D000336 ORTHO05D002705 4.9e-06 55.1 94 33.0
C07p46900 Brassica napus HOM05D000336 ORTHO05D002705 4.9e-06 55.1 95 36.8
PGR142G1279 Punica granatum HOM05D000336 ORTHO05D002705 4.9e-06 55.1 92 38.0
Atru.chr12.707 Acer truncatum HOM05D000336 ORTHO05D002705 6.4e-06 54.7 96 40.6
Atru.chr12.718 Acer truncatum HOM05D000336 ORTHO05D002705 6.4e-06 54.7 96 40.6
A03p48810 Brassica napus HOM05D000336 ORTHO05D002705 6.4e-06 54.7 95 37.9
AUR62013097 Chenopodium quinoa HOM05D000336 ORTHO05D002705 6.4e-06 54.7 74 41.9
Nn2g10696 Nelumbo nucifera HOM05D000336 ORTHO05D002705 6.4e-06 54.7 118 30.5
CANSAT35G1657 Cannabis sativa HOM05D000336 ORTHO05D002705 8.4e-06 54.3 98 37.8
Phvul.003G274300 Phaseolus vulgaris HOM05D000336 ORTHO05D002705 8.4e-06 54.3 93 33.3
Sed0009569 Sechium edule HOM05D000336 ORTHO05D002705 8.4e-06 54.3 97 38.1


User provided reference genes

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