Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g8282 Utricularia gibba HOM05D004305 ORTHO05D005159 6.4e-197 690.6 370 100.0
unitig_32.g10874 Utricularia gibba HOM05D004305 ORTHO05D005159 1.2e-102 377.5 371 61.7
unitig_748.g7348 Utricularia gibba HOM05D004305 ORTHO05D005159 6.9e-42 175.6 367 39.0
MSTRG.7546 Avicennia marina HOM05D004305 ORTHO05D005159 8.7e-37 158.7 458 32.1
MSTRG.16299 Avicennia marina HOM05D004305 ORTHO05D005159 5.5e-31 139.4 462 32.5
Oeu041117.1 Olea europaea HOM05D004305 ORTHO05D005159 6.0e-30 136.0 430 29.8
Migut.M01906 Erythranthe guttata HOM05D004305 ORTHO05D005159 1.9e-28 131.0 449 31.0
SGA_v2.0_scaffold223G42870 Striga asiatica HOM05D004305 ORTHO05D005159 1.3e-27 128.3 397 33.0
SGA_v2.0_scaffold1G00275 Striga asiatica HOM05D004305 ORTHO05D005159 3.1e-26 123.6 418 33.0
Oeu060316.1 Olea europaea HOM05D004305 ORTHO05D005159 2.5e-23 114.0 327 32.4
Sopen02g019200 Solanum pennellii HOM05D004305 ORTHO05D005159 1.2e-22 111.7 374 29.9
Solyc02g070040.1 Solanum lycopersicum HOM05D004305 ORTHO05D005159 2.7e-22 110.5 374 29.7
PGSC0003DMG400021011 Solanum tuberosum HOM05D004305 ORTHO05D005159 2.7e-22 110.5 431 28.5
Oeu015165.2 Olea europaea HOM05D004305 ORTHO05D005159 6.1e-22 109.4 440 28.4
Oeu040075.1 Olea europaea HOM05D004305 ORTHO05D005159 5.1e-21 106.3 321 29.3
Sopen02g006550 Solanum pennellii HOM05D004305 ORTHO05D005159 1.5e-20 104.8 369 29.3
Peaxi162Scf00395g00054 Petunia axillaris HOM05D004305 ORTHO05D005159 1.9e-20 104.4 299 32.8
Solyc02g022920.1 Solanum lycopersicum HOM05D004305 ORTHO05D005159 1.9e-20 104.4 414 27.1
Prupe.4G095400 Prunus persica HOM05D004305 ORTHO05D005159 2.5e-20 104.0 195 38.5
unitig_32.g11679 Utricularia gibba HOM05D004305 ORTHO05D005159 2.5e-20 104.0 137 52.6
Rhsim02G0163100 Rhododendron simsii HOM05D004305 ORTHO05D005159 4.3e-20 103.2 188 38.8
Cc09_g07570 Coffea canephora HOM05D004305 ORTHO05D005159 2.2e-19 100.9 432 28.9
Sabra11G0141400 Salix brachista HOM05D004305 ORTHO05D005159 2.2e-19 100.9 198 41.4
PGSC0003DMG400021114 Solanum tuberosum HOM05D004305 ORTHO05D005159 6.3e-19 99.4 367 29.2
GSVIVG01021709001 Vitis vinifera HOM05D004305 ORTHO05D005159 1.1e-18 98.6 335 28.7
Ciclev10015182m.g Citrus clementina HOM05D004305 ORTHO05D005159 3.1e-18 97.1 445 28.1
TWI15G0126 Tripterygium wilfordii HOM05D004305 ORTHO05D005159 4.1e-18 96.7 418 26.6
Cpa.g.c43226 Carica papaya HOM05D004305 ORTHO05D005159 5.3e-18 96.3 428 28.3
Lj1P1160T59 Lonicera japonica HOM05D004305 ORTHO05D005159 5.3e-18 96.3 446 28.5
Nitab4.5_0000076g0140 Nicotiana tabacum HOM05D004305 ORTHO05D005159 5.3e-18 96.3 297 31.6
Sp2g09190 Schrenkiella parvula HOM05D004305 ORTHO05D005159 5.3e-18 96.3 385 27.8
Nitab4.5_0004204g0010 Nicotiana tabacum HOM05D004305 ORTHO05D005159 1.2e-17 95.1 393 26.7
Dinv06927 Davidia involucrata HOM05D004305 ORTHO05D005159 2.0e-17 94.4 218 32.6
Actinidia31373 Actinidia chinensis HOM05D004305 ORTHO05D005159 3.4e-17 93.6 189 41.3
BcaC09g51296 Brassica carinata HOM05D004305 ORTHO05D005159 5.9e-17 92.8 409 31.5
TWI38G0672 Tripterygium wilfordii HOM05D004305 ORTHO05D005159 7.7e-17 92.4 184 35.9
COL.COLO4_26846 Corchorus olitorius HOM05D004305 ORTHO05D005159 1.0e-16 92.0 174 36.8
C01p14710 Brassica napus HOM05D004305 ORTHO05D005159 1.3e-16 91.7 418 28.7
BolC1t01423H Brassica oleracea HOM05D004305 ORTHO05D005159 1.3e-16 91.7 418 28.7
BcaNung04140 Brassica carinata HOM05D004305 ORTHO05D005159 1.7e-16 91.3 421 29.2
Eucgr.D00100 Eucalyptus grandis HOM05D004305 ORTHO05D005159 1.7e-16 91.3 200 39.0
A03p52530 Brassica napus HOM05D004305 ORTHO05D005159 2.2e-16 90.9 392 30.1
Nitab4.5_0001583g0210 Nicotiana tabacum HOM05D004305 ORTHO05D005159 2.9e-16 90.5 170 35.3
Potri.011G162400 Populus trichocarpa HOM05D004305 ORTHO05D005159 2.9e-16 90.5 250 34.0
A01p12300 Brassica napus HOM05D004305 ORTHO05D005159 3.8e-16 90.1 407 28.5
BraA03t14328Z Brassica rapa HOM05D004305 ORTHO05D005159 3.8e-16 90.1 392 30.4
MD05G1269300 Malus domestica HOM05D004305 ORTHO05D005159 3.8e-16 90.1 199 38.7
CANSAT35G0942 Cannabis sativa HOM05D004305 ORTHO05D005159 5.0e-16 89.7 471 26.3
Duzib235G0167 Durio zibethinus HOM05D004305 ORTHO05D005159 5.0e-16 89.7 389 28.5
Gohir.A06G119900 Gossypium hirsutum HOM05D004305 ORTHO05D005159 5.0e-16 89.7 375 28.8
Manes.14G124700 Manihot esculenta HOM05D004305 ORTHO05D005159 5.0e-16 89.7 207 34.3
Thhalv10003311m.g Eutrema salsugineum HOM05D004305 ORTHO05D005159 1.1e-15 88.6 370 27.8
BraA01t01174Z Brassica rapa HOM05D004305 ORTHO05D005159 1.4e-15 88.2 405 28.9
Gorai.010G144500 Gossypium raimondii HOM05D004305 ORTHO05D005159 1.4e-15 88.2 378 28.6
Potri.001G464300 Populus trichocarpa HOM05D004305 ORTHO05D005159 1.4e-15 88.2 243 32.1
BcaB03g11678 Brassica carinata HOM05D004305 ORTHO05D005159 1.9e-15 87.8 300 31.3
C07p50970 Brassica napus HOM05D004305 ORTHO05D005159 1.9e-15 87.8 409 27.6
BolC3t20584H Brassica oleracea HOM05D004305 ORTHO05D005159 2.5e-15 87.4 275 30.9
CARHR227440 Cardamine hirsuta HOM05D004305 ORTHO05D005159 2.5e-15 87.4 200 34.5
RcHm_v2.0_Chr5g0017411 Rosa chinensis HOM05D004305 ORTHO05D005159 2.5e-15 87.4 451 27.7
BolC7t45599H Brassica oleracea HOM05D004305 ORTHO05D005159 3.2e-15 87.0 382 28.5
BcaC04g21838 Brassica carinata HOM05D004305 ORTHO05D005159 4.2e-15 86.7 286 29.7
C09p26810 Brassica napus HOM05D004305 ORTHO05D005159 4.2e-15 86.7 286 29.7
THA.LOC104806249 Tarenaya hassleriana HOM05D004305 ORTHO05D005159 5.5e-15 86.3 256 34.4
BcaNung05413 Brassica carinata HOM05D004305 ORTHO05D005159 7.2e-15 85.9 389 27.8
CSS0026993 Camellia sinensis var. sinensis HOM05D004305 ORTHO05D005159 7.2e-15 85.9 222 30.6
Gohir.D06G124500 Gossypium hirsutum HOM05D004305 ORTHO05D005159 7.2e-15 85.9 378 28.0
Aa31LG6G2950 Aethionema arabicum HOM05D004305 ORTHO05D005159 1.2e-14 85.1 183 35.5
BcaC01g00679 Brassica carinata HOM05D004305 ORTHO05D005159 1.2e-14 85.1 275 30.5
C03p83040 Brassica napus HOM05D004305 ORTHO05D005159 1.2e-14 85.1 275 30.5
Haze_05867 Corylus avellana HOM05D004305 ORTHO05D005159 1.2e-14 85.1 191 36.6
FAN11G3528 Fragaria x ananassa HOM05D004305 ORTHO05D005159 1.2e-14 85.1 270 32.2
MD10G1248100 Malus domestica HOM05D004305 ORTHO05D005159 1.2e-14 85.1 198 37.9
Sp7g18970 Schrenkiella parvula HOM05D004305 ORTHO05D005159 1.2e-14 85.1 202 34.2
FAN16G1832 Fragaria x ananassa HOM05D004305 ORTHO05D005159 1.6e-14 84.7 269 32.0
Actinidia13459 Actinidia chinensis HOM05D004305 ORTHO05D005159 2.1e-14 84.3 192 33.3
BcaB07g30530 Brassica carinata HOM05D004305 ORTHO05D005159 2.1e-14 84.3 378 27.0
Sabra16G0315300 Salix brachista HOM05D004305 ORTHO05D005159 2.7e-14 84.0 192 38.5
CARHR178780 Cardamine hirsuta HOM05D004305 ORTHO05D005159 3.6e-14 83.6 390 25.6
DCAR_003840 Daucus carota HOM05D004305 ORTHO05D005159 3.6e-14 83.6 402 24.4
BolC9t55570H Brassica oleracea HOM05D004305 ORTHO05D005159 4.6e-14 83.2 286 29.7
BcaNung07356 Brassica carinata HOM05D004305 ORTHO05D005159 6.1e-14 82.8 406 26.6
THA.LOC104812214 Tarenaya hassleriana HOM05D004305 ORTHO05D005159 1.4e-13 81.6 188 39.9
Lj6g0010125 Lotus japonicus HOM05D004305 ORTHO05D005159 1.8e-13 81.3 398 27.4
PSO675G0053 Papaver somniferum HOM05D004305 ORTHO05D005159 1.8e-13 81.3 182 31.9
BcaC06g31624 Brassica carinata HOM05D004305 ORTHO05D005159 2.3e-13 80.9 367 27.5
Carub.0007s2055 Capsella rubella HOM05D004305 ORTHO05D005159 2.3e-13 80.9 303 30.0
Thecc.06G003200 Theobroma cacao HOM05D004305 ORTHO05D005159 2.3e-13 80.9 326 26.4
AT4G20880 Arabidopsis thaliana HOM05D004305 ORTHO05D005159 3.9e-13 80.1 421 26.8
AL7G33270 Arabidopsis lyrata HOM05D004305 ORTHO05D005159 5.1e-13 79.7 437 29.3
Duzib192G0088 Durio zibethinus HOM05D004305 ORTHO05D005159 8.8e-13 79.0 388 30.4
FAN25G2552 Fragaria x ananassa HOM05D004305 ORTHO05D005159 8.8e-13 79.0 275 30.9
MBI02_g39880_MAGBIO Magnolia biondii HOM05D004305 ORTHO05D005159 8.8e-13 79.0 161 39.1
Atru.chr10.781 Acer truncatum HOM05D004305 ORTHO05D005159 1.1e-12 78.6 310 33.9
FvH4_3g10700 Fragaria vesca HOM05D004305 ORTHO05D005159 2.0e-12 77.8 334 29.3
Glyma.15G132400 Glycine max HOM05D004305 ORTHO05D005159 2.0e-12 77.8 410 29.3
Lsat_1_v5_gn_9_25860 Lactuca sativa HOM05D004305 ORTHO05D005159 2.0e-12 77.8 291 28.2
Manes.06G058700 Manihot esculenta HOM05D004305 ORTHO05D005159 2.0e-12 77.8 204 30.9
A06p47270 Brassica napus HOM05D004305 ORTHO05D005159 2.5e-12 77.4 158 37.3
FAN21G2878 Fragaria x ananassa HOM05D004305 ORTHO05D005159 2.5e-12 77.4 321 28.3
C07p27080 Brassica napus HOM05D004305 ORTHO05D005159 4.3e-12 76.6 275 27.6
BolC7t43238H Brassica oleracea HOM05D004305 ORTHO05D005159 4.3e-12 76.6 275 28.4
Glyma.09G026200 Glycine max HOM05D004305 ORTHO05D005159 4.3e-12 76.6 310 31.3
A08p14960 Brassica napus HOM05D004305 ORTHO05D005159 7.4e-12 75.9 390 25.6
A09p21070 Brassica napus HOM05D004305 ORTHO05D005159 7.4e-12 75.9 371 27.5
BraA08t33477Z Brassica rapa HOM05D004305 ORTHO05D005159 7.4e-12 75.9 390 25.6
CsaV3_6G052500 Cucumis sativus L. HOM05D004305 ORTHO05D005159 9.7e-12 75.5 324 29.0
BcaC06g34566 Brassica carinata HOM05D004305 ORTHO05D005159 1.3e-11 75.1 275 27.3
CiPaw.09G142800 Carya illinoinensis HOM05D004305 ORTHO05D005159 1.3e-11 75.1 272 33.1
Thhalv10025304m.g Eutrema salsugineum HOM05D004305 ORTHO05D005159 1.3e-11 75.1 439 28.5
ClCG03G008260 Citrullus lanatus HOM05D004305 ORTHO05D005159 1.7e-11 74.7 259 30.9
BraA09t37708Z Brassica rapa HOM05D004305 ORTHO05D005159 2.2e-11 74.3 377 28.1
Medtr2g031350 Medicago truncatula HOM05D004305 ORTHO05D005159 2.2e-11 74.3 411 27.0
Sabra16G0313900 Salix brachista HOM05D004305 ORTHO05D005159 2.2e-11 74.3 452 27.4
Cfa000806 Carpinus fangiana HOM05D004305 ORTHO05D005159 2.8e-11 73.9 430 27.9
MELO3C007060.2 Cucumis melo HOM05D004305 ORTHO05D005159 2.8e-11 73.9 335 29.6
ClCG01G025280 Citrullus lanatus HOM05D004305 ORTHO05D005159 3.7e-11 73.6 419 26.0
Phvul.006G126000 Phaseolus vulgaris HOM05D004305 ORTHO05D005159 6.3e-11 72.8 297 27.9
BraA06t27598Z Brassica rapa HOM05D004305 ORTHO05D005159 8.2e-11 72.4 285 28.1
HanXRQChr08g0237311 Helianthus annuus HOM05D004305 ORTHO05D005159 1.1e-10 72.0 300 28.0
Lj4g0027556 Lotus japonicus HOM05D004305 ORTHO05D005159 1.1e-10 72.0 332 26.2
Psat1g165840 Pisum sativum HOM05D004305 ORTHO05D005159 1.1e-10 72.0 396 28.0
VMungo0540G0062 Vigna mungo HOM05D004305 ORTHO05D005159 1.8e-10 71.2 384 26.0
BcaB07g30950 Brassica carinata HOM05D004305 ORTHO05D005159 2.4e-10 70.9 281 28.1
Sc03g0008520 Simmondsia chinensis HOM05D004305 ORTHO05D005159 2.4e-10 70.9 199 31.7
MELO3C002832.2 Cucumis melo HOM05D004305 ORTHO05D005159 5.3e-10 69.7 184 33.2
PGR083G0011 Punica granatum HOM05D004305 ORTHO05D005159 9.1e-10 68.9 191 35.6
CsaV3_1G037140 Cucumis sativus L. HOM05D004305 ORTHO05D005159 1.2e-09 68.6 426 24.9
Lalb_Chr07g0189031 Lupinus albus HOM05D004305 ORTHO05D005159 1.2e-09 68.6 194 30.4
Nn1g03508 Nelumbo nucifera HOM05D004305 ORTHO05D005159 1.5e-09 68.2 337 27.0
QL93p0201_0023 Quercus lobata HOM05D004305 ORTHO05D005159 2.6e-09 67.4 327 29.1
Ca_00869_v3 Cicer arietinum L. HOM05D004305 ORTHO05D005159 3.4e-09 67.0 433 25.9
QL05p063597 Quercus lobata HOM05D004305 ORTHO05D005159 3.4e-09 67.0 327 29.1
AT5G44350 Arabidopsis thaliana HOM05D004305 ORTHO05D005159 7.7e-09 65.9 305 29.2
AL8G15540 Arabidopsis lyrata HOM05D004305 ORTHO05D005159 1.7e-08 64.7 304 26.6
EL10Ac4g07786 Beta vulgaris HOM05D023924 ORTHO05D023401 1.7e-08 64.7 52 67.3
Lalb_Chr18g0058121 Lupinus albus HOM05D004305 ORTHO05D005159 1.7e-08 64.7 401 27.4
Carub.0008s0412 Capsella rubella HOM05D004305 ORTHO05D005159 2.2e-08 64.3 309 27.8
Psat7g094000 Pisum sativum HOM05D004305 ORTHO05D005159 2.2e-08 64.3 389 26.7
Actinidia32347 Actinidia chinensis HOM05D004305 ORTHO05D005159 2.9e-08 63.9 52 65.4
BcaC03g16656 Brassica carinata HOM05D004305 ORTHO05D005159 2.9e-08 63.9 292 26.0
Nn1g07139 Nelumbo nucifera HOM05D004305 ORTHO05D005159 2.9e-08 63.9 169 30.2
A02p28380 Brassica napus HOM05D004305 ORTHO05D005159 5.0e-08 63.2 368 25.8
Sed0024509 Sechium edule HOM05D004305 ORTHO05D005159 6.5e-08 62.8 272 26.1
BraA02t07875Z Brassica rapa HOM05D004305 ORTHO05D005159 8.5e-08 62.4 378 23.5
Medtr4g094532 Medicago truncatula HOM05D004305 ORTHO05D005159 8.5e-08 62.4 257 27.2
AUR62014849 Chenopodium quinoa HOM05D002349 ORTHO05D002464 1.4e-07 61.6 52 63.5
BolC2t10530H Brassica oleracea HOM05D004305 ORTHO05D005159 7.2e-07 59.3 267 25.8
SHI24805 Sapria himalayana HOM05D004305 ORTHO05D005159 1.6e-06 58.2 58 51.7
Ah.04g165990 Amaranthus hybridus HOM05D023924 ORTHO05D023401 2.7e-06 57.4 99 44.4


User provided reference genes

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