Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g8237 Utricularia gibba HOM05D003722 ORTHO05D004589 0.0e+00 1151.3 826 100.0
unitig_4.g30332 Utricularia gibba HOM05D003722 ORTHO05D004589 6.2e-192 675.2 784 63.1
Migut.A00079 Erythranthe guttata HOM05D003722 ORTHO05D004589 4.6e-187 659.1 893 68.1
Migut.E01781 Erythranthe guttata HOM05D003722 ORTHO05D004589 5.6e-185 652.1 863 68.8
MSTRG.25985 Avicennia marina HOM05D003722 ORTHO05D004589 5.8e-182 642.1 868 68.1
Nitab4.5_0000446g0200 Nicotiana tabacum HOM05D003722 ORTHO05D004589 2.4e-180 636.7 891 61.7
Oeu036060.1 Olea europaea HOM05D003722 ORTHO05D004589 5.3e-175 619.0 856 65.3
Potri.018G048700 Populus trichocarpa HOM05D003722 ORTHO05D004589 2.6e-174 616.7 918 61.1
CSS0013734 Camellia sinensis var. sinensis HOM05D003722 ORTHO05D004589 1.3e-173 614.4 919 65.2
Phvul.009G081900 Phaseolus vulgaris HOM05D003722 ORTHO05D004589 1.9e-172 610.5 813 70.4
SalBow4G2891 Salvia bowleyana HOM05D003722 ORTHO05D004589 3.2e-172 609.8 868 66.7
Rhsim03G0063100 Rhododendron simsii HOM05D003722 ORTHO05D004589 9.3e-172 608.2 918 63.9
Dinv41842 Davidia involucrata HOM05D003722 ORTHO05D004589 2.1e-171 607.1 921 65.5
Sopen08g017250 Solanum pennellii HOM05D003722 ORTHO05D004589 4.6e-171 605.9 890 61.5
Solyc08g061820.3 Solanum lycopersicum HOM05D003722 ORTHO05D004589 1.7e-170 604.0 888 61.3
PGSC0003DMG400018806 Solanum tuberosum HOM05D003722 ORTHO05D004589 2.3e-170 603.6 890 63.4
Dinv02138 Davidia involucrata HOM05D003722 ORTHO05D004589 5.1e-170 602.4 934 57.6
MD15G1049900 Malus domestica HOM05D003722 ORTHO05D004589 5.1e-170 602.4 808 67.5
Hma1.2p1_0836F.1_g225970 Hydrangea macrophylla HOM05D003722 ORTHO05D004589 1.1e-169 601.3 906 65.3
Peaxi162Scf00486g01029 Petunia axillaris HOM05D003722 ORTHO05D004589 1.1e-169 601.3 887 61.9
GSVIVG01035469001 Vitis vinifera HOM05D003722 ORTHO05D004589 1.1e-169 601.3 815 65.4
Nitab4.5_0002831g0060 Nicotiana tabacum HOM05D003722 ORTHO05D004589 1.9e-169 600.5 891 62.2
Potri.006G220900 Populus trichocarpa HOM05D003722 ORTHO05D004589 1.9e-169 600.5 919 64.5
Manes.16G085600 Manihot esculenta HOM05D003722 ORTHO05D004589 2.5e-169 600.1 907 64.5
DCAR_004379 Daucus carota HOM05D003722 ORTHO05D004589 4.0e-167 592.8 893 64.9
Sabra18G0046400 Salix brachista HOM05D003722 ORTHO05D004589 4.0e-167 592.8 919 59.6
MD08G1071300 Malus domestica HOM05D003722 ORTHO05D004589 1.5e-166 590.9 808 69.1
TWI32G0253 Tripterygium wilfordii HOM05D003722 ORTHO05D004589 1.5e-166 590.9 814 66.8
arahy.Tifrunner.gnm1.ann1.JX1TK4 Arachis hypogaea HOM05D003722 ORTHO05D004589 2.6e-166 590.1 816 69.5
Medtr1g015450 Medicago truncatula HOM05D003722 ORTHO05D004589 2.6e-166 590.1 909 62.8
Prupe.1G404200 Prunus persica HOM05D003722 ORTHO05D004589 2.6e-166 590.1 816 64.0
TAR624G1180 Trochodendron aralioides HOM05D003722 ORTHO05D004589 3.8e-165 586.3 831 67.3
Nn6g35614 Nelumbo nucifera HOM05D003722 ORTHO05D004589 3.2e-164 583.2 827 69.5
SGA_v2.0_scaffold163G37999 Striga asiatica HOM05D003722 ORTHO05D004589 3.2e-164 583.2 865 65.5
SGA_v2.0_scaffold64G21877 Striga asiatica HOM05D003722 ORTHO05D004589 3.2e-164 583.2 888 64.3
Sc23g0004200 Simmondsia chinensis HOM05D003722 ORTHO05D004589 1.2e-163 581.3 814 67.9
Lsat_1_v5_gn_8_70661 Lactuca sativa HOM05D003722 ORTHO05D004589 1.6e-163 580.9 896 61.5
TPR.G38933 Trifolium pratense HOM05D003722 ORTHO05D004589 6.0e-163 578.9 850 64.8
FvH4_2g30970 Fragaria vesca HOM05D003722 ORTHO05D004589 1.0e-162 578.2 815 69.4
QL02p017002 Quercus lobata HOM05D003722 ORTHO05D004589 1.0e-162 578.2 805 69.9
FAN24G1820 Fragaria x ananassa HOM05D003722 ORTHO05D004589 1.3e-162 577.8 815 69.4
Aqoxy7G04082 Aquilegia oxysepala HOM05D003722 ORTHO05D004589 1.5e-161 574.3 820 67.3
HanXRQChr09g0261801 Helianthus annuus HOM05D003722 ORTHO05D004589 2.5e-161 573.5 887 55.7
Glyma.14G098900 Glycine max HOM05D003722 ORTHO05D004589 7.4e-161 572.0 835 68.0
Eucgr.C03158 Eucalyptus grandis HOM05D003722 ORTHO05D004589 1.6e-160 570.9 819 68.6
TWI34G0168 Tripterygium wilfordii HOM05D003722 ORTHO05D004589 3.7e-160 569.7 814 67.4
Glyma.17G225800 Glycine max HOM05D003722 ORTHO05D004589 6.2e-160 568.9 835 67.9
Glyma.06G055800 Glycine max HOM05D003722 ORTHO05D004589 8.1e-160 568.5 813 65.9
Haze_18293 Corylus avellana HOM05D003722 ORTHO05D004589 1.1e-159 568.2 846 64.8
CSS0048906 Camellia sinensis var. sinensis HOM05D003722 ORTHO05D004589 1.4e-159 567.8 804 69.3
PSO724G0454 Papaver somniferum HOM05D003722 ORTHO05D004589 1.8e-159 567.4 874 64.0
RcHm_v2.0_Chr6g0311801 Rosa chinensis HOM05D003722 ORTHO05D004589 1.8e-159 567.4 812 62.4
Ca_13110_v3 Cicer arietinum L. HOM05D003722 ORTHO05D004589 5.3e-159 565.8 816 67.8
Lj5g0007526 Lotus japonicus HOM05D003722 ORTHO05D004589 9.0e-159 565.1 821 68.3
Thecc.09G063300 Theobroma cacao HOM05D003722 ORTHO05D004589 1.2e-158 564.7 902 63.7
TAR626G0824 Trochodendron aralioides HOM05D003722 ORTHO05D004589 2.6e-158 563.5 816 69.1
TAR626G0360 Trochodendron aralioides HOM05D003722 ORTHO05D004589 3.4e-158 563.1 816 69.1
DCAR_001223 Daucus carota HOM05D003722 ORTHO05D004589 4.5e-158 562.8 871 65.7
FAN27G2597 Fragaria x ananassa HOM05D003722 ORTHO05D004589 5.8e-158 562.4 826 57.4
PSO135G0299 Papaver somniferum HOM05D003722 ORTHO05D004589 5.8e-158 562.4 870 62.8
FAN20G0071 Fragaria x ananassa HOM05D003722 ORTHO05D004589 9.9e-158 561.6 815 68.5
ECA236G0039 Erigeron canadensis HOM05D003722 ORTHO05D004589 2.2e-157 560.5 889 62.8
Gohir.A07G019700 Gossypium hirsutum HOM05D003722 ORTHO05D004589 2.2e-157 560.5 890 62.7
CsaV3_4G036040 Cucumis sativus L. HOM05D003722 ORTHO05D004589 1.4e-156 557.8 816 67.0
SGA_v2.0_scaffold169G38713 Striga asiatica HOM05D003722 ORTHO05D004589 2.5e-156 557.0 890 61.0
arahy.Tifrunner.gnm1.ann1.G8USHK Arachis hypogaea HOM05D003722 ORTHO05D004589 3.2e-156 556.6 816 67.6
Manes.03G053433 Manihot esculenta HOM05D003722 ORTHO05D004589 3.2e-156 556.6 915 62.8
VMungo1309G1038 Vigna mungo HOM05D003722 ORTHO05D004589 3.2e-156 556.6 793 68.7
TAR636G3697 Trochodendron aralioides HOM05D003722 ORTHO05D004589 4.2e-156 556.2 831 59.7
Nn8g38669 Nelumbo nucifera HOM05D003722 ORTHO05D004589 5.5e-156 555.8 917 63.4
Sabra06G0170700 Salix brachista HOM05D003722 ORTHO05D004589 1.2e-155 554.7 984 56.9
vmacro07490 Vaccinium macrocarpon HOM05D003722 ORTHO05D004589 1.2e-155 554.7 793 65.7
COL.COLO4_21138 Corchorus olitorius HOM05D003722 ORTHO05D004589 2.1e-155 553.9 895 62.1
Gohir.D07G019500 Gossypium hirsutum HOM05D003722 ORTHO05D004589 2.1e-155 553.9 890 62.8
Lalb_Chr22g0356231 Lupinus albus HOM05D003722 ORTHO05D004589 3.5e-155 553.1 813 68.1
ATR0598G202 Amborella trichopoda HOM05D003722 ORTHO05D004589 4.6e-155 552.7 820 66.1
Ciclev10007327m.g Citrus clementina HOM05D003722 ORTHO05D004589 1.3e-154 551.2 830 67.5
VMungo0647G1341 Vigna mungo HOM05D003722 ORTHO05D004589 3.0e-154 550.1 820 66.7
Gorai.001G020200 Gossypium raimondii HOM05D003722 ORTHO05D004589 8.7e-154 548.5 890 62.2
CiPaw.15G091900 Carya illinoinensis HOM05D003722 ORTHO05D004589 2.5e-153 547.0 794 62.6
CAN.G881.1 Capsicum annuum HOM05D003722 ORTHO05D004589 3.3e-153 546.6 859 60.9
Glyma.04G055700 Glycine max HOM05D003722 ORTHO05D004589 2.8e-152 543.5 813 64.9
Duzib187G0791 Durio zibethinus HOM05D003722 ORTHO05D004589 1.8e-151 540.8 895 62.5
ClCG05G015740 Citrullus lanatus HOM05D003722 ORTHO05D004589 4.0e-151 539.7 815 67.1
Lalb_Chr23g0267971 Lupinus albus HOM05D003722 ORTHO05D004589 2.0e-150 537.3 832 56.7
Lj7A221G29 Lonicera japonica HOM05D003722 ORTHO05D004589 2.6e-150 537.0 903 54.7
CANSAT25G1471 Cannabis sativa HOM05D003722 ORTHO05D004589 4.5e-150 536.2 810 66.9
HanXRQChr03g0065591 Helianthus annuus HOM05D003722 ORTHO05D004589 3.8e-149 533.1 901 61.8
MBI19_g11832_MAGBIO Magnolia biondii HOM05D003722 ORTHO05D004589 6.5e-149 532.3 816 67.6
PGR044G0665 Punica granatum HOM05D003722 ORTHO05D004589 1.4e-148 531.2 796 67.5
Actinidia27552 Actinidia chinensis HOM05D003722 ORTHO05D004589 9.3e-148 528.5 907 60.3
Phvul.001G038700 Phaseolus vulgaris HOM05D003722 ORTHO05D004589 3.3e-145 520.0 819 65.6
HanXRQChr05g0135941 Helianthus annuus HOM05D003722 ORTHO05D004589 3.7e-144 516.5 893 56.0
Sed0027838 Sechium edule HOM05D003722 ORTHO05D004589 8.2e-144 515.4 803 67.1
AT4G33210 Arabidopsis thaliana HOM05D003722 ORTHO05D004589 3.1e-143 513.5 797 64.9
arahy.Tifrunner.gnm1.ann1.V7LPDI Arachis hypogaea HOM05D003722 ORTHO05D004589 4.5e-142 509.6 804 64.9
Duzib168G1968 Durio zibethinus HOM05D003722 ORTHO05D004589 4.5e-142 509.6 773 64.6
BraA03t15228Z Brassica rapa HOM05D003722 ORTHO05D004589 1.3e-141 508.1 797 64.4
arahy.Tifrunner.gnm1.ann1.V9GZ7C Arachis hypogaea HOM05D003722 ORTHO05D004589 5.0e-141 506.1 804 67.2
Lalb_Chr08g0244821 Lupinus albus HOM05D003722 ORTHO05D004589 7.2e-140 502.3 816 60.2
SEGI_30451 Sequoiadendron giganteum HOM05D003722 ORTHO05D004589 1.6e-139 501.1 816 63.4
THA.LOC104803705 Tarenaya hassleriana HOM05D003722 ORTHO05D004589 7.9e-139 498.8 825 61.3
EL10Ac2g03782 Beta vulgaris HOM05D003722 ORTHO05D004589 1.4e-138 498.0 801 60.0
Carub.0007s0725 Capsella rubella HOM05D003722 ORTHO05D004589 2.5e-137 493.8 797 64.6
Sp7g30950 Schrenkiella parvula HOM05D003722 ORTHO05D004589 5.7e-137 492.7 797 64.0
BcaNung02160 Brassica carinata HOM05D003722 ORTHO05D004589 2.2e-136 490.7 897 59.2
A01p04970 Brassica napus HOM05D003722 ORTHO05D004589 1.2e-134 485.0 797 64.1
BraA01t00479Z Brassica rapa HOM05D003722 ORTHO05D004589 1.2e-134 485.0 797 64.1
BcaB03g12811 Brassica carinata HOM05D003722 ORTHO05D004589 2.0e-134 484.2 797 58.8
BolC7t46400H Brassica oleracea HOM05D003722 ORTHO05D004589 2.6e-134 483.8 893 59.1
AUR62009080 Chenopodium quinoa HOM05D003722 ORTHO05D004589 4.5e-134 483.0 858 55.8
Atru.chr7.1848 Acer truncatum HOM05D003722 ORTHO05D004589 1.0e-133 481.9 720 66.2
C03p86790 Brassica napus HOM05D003722 ORTHO05D004589 5.0e-133 479.6 794 58.6
C01p05420 Brassica napus HOM05D003722 ORTHO05D004589 6.5e-133 479.2 797 63.7
BolC1t00522H Brassica oleracea HOM05D003722 ORTHO05D004589 6.5e-133 479.2 797 63.7
CARHR241240 Cardamine hirsuta HOM05D003722 ORTHO05D004589 6.5e-133 479.2 797 63.0
Sed0000287 Sechium edule HOM05D003722 ORTHO05D004589 1.4e-132 478.0 717 64.6
BcaC09g52132 Brassica carinata HOM05D003722 ORTHO05D004589 1.9e-132 477.6 797 63.6
BcaC01g01002 Brassica carinata HOM05D003722 ORTHO05D004589 3.2e-132 476.9 794 58.1
BolC3t20973H Brassica oleracea HOM05D003722 ORTHO05D004589 3.2e-132 476.9 794 58.1
BraA08t33724Z Brassica rapa HOM05D003722 ORTHO05D004589 7.2e-132 475.7 795 59.1
Aa31sc290G30 Aethionema arabicum HOM05D003722 ORTHO05D004589 1.2e-131 474.9 802 62.6
AUR62020586 Chenopodium quinoa HOM05D003722 ORTHO05D004589 1.2e-131 474.9 834 59.6
SEGI_01273 Sequoiadendron giganteum HOM05D003722 ORTHO05D004589 1.6e-131 474.6 821 62.4
HPP92_006154 Vanilla planifolia HOM05D003722 ORTHO05D004589 2.8e-128 463.8 818 60.0
AL7G18350 Arabidopsis lyrata HOM05D003722 ORTHO05D004589 1.8e-127 461.1 797 62.7
Gohir.D06G083100 Gossypium hirsutum HOM05D003722 ORTHO05D004589 3.1e-127 460.3 873 57.0
Thhalv10024312m.g Eutrema salsugineum HOM05D003722 ORTHO05D004589 2.6e-126 457.2 792 62.8
Medtr1g015480 Medicago truncatula HOM05D003722 ORTHO05D004589 1.0e-125 455.3 781 60.1
Hund19422 Selenicereus undatus HOM05D003722 ORTHO05D004589 5.0e-125 453.0 760 54.3
MELO3C016912.2 Cucumis melo HOM05D003722 ORTHO05D004589 2.7e-123 447.2 773 51.5
Cpa.g.sc126.25 Carica papaya HOM05D003722 ORTHO05D004589 4.4e-121 439.9 617 76.0
A08p17750 Brassica napus HOM05D003722 ORTHO05D004589 4.5e-118 429.9 869 52.1
BolC3t20974H Brassica oleracea HOM05D003722 ORTHO05D004589 1.7e-117 427.9 795 56.4
Gohir.A06G081600 Gossypium hirsutum HOM05D003722 ORTHO05D004589 2.9e-117 427.2 644 64.4
BraA08t33725Z Brassica rapa HOM05D003722 ORTHO05D004589 3.8e-117 426.8 867 52.4
A08p17740 Brassica napus HOM05D003722 ORTHO05D004589 9.4e-116 422.2 794 56.8
Psat6g022880 Pisum sativum HOM05D003722 ORTHO05D004589 9.4e-116 422.2 807 51.5
TWI39G1239 Tripterygium wilfordii HOM05D003722 ORTHO05D004589 2.6e-113 414.1 741 56.4
SalBow1G2799 Salvia bowleyana HOM05D003722 ORTHO05D004589 3.1e-111 407.1 644 74.5
C03p86800 Brassica napus HOM05D003722 ORTHO05D004589 4.1e-111 406.8 795 55.0
Actinidia25690 Actinidia chinensis HOM05D003722 ORTHO05D004589 2.7e-110 404.1 645 70.7
Oeu022303.1 Olea europaea HOM05D003722 ORTHO05D004589 1.0e-109 402.1 857 36.3
CiPaw.16G068500 Carya illinoinensis HOM05D003722 ORTHO05D004589 3.2e-108 397.1 644 68.0
Gorai.010G096600 Gossypium raimondii HOM05D003722 ORTHO05D004589 2.3e-106 391.0 832 48.3
CDE07G1686 Ceratophyllum demersum HOM05D003722 ORTHO05D004589 7.2e-100 369.4 638 61.4
Pp3c5_23900 Physcomitrium patens HOM05D003722 ORTHO05D004589 1.6e-99 368.2 932 47.0
Mapoly0202s0013 Marchantia polymorpha HOM05D003722 ORTHO05D004589 1.5e-97 361.7 903 48.2
SMO238G0031 Selaginella moellendorffii HOM05D003722 ORTHO05D004589 3.7e-96 357.1 791 50.7
Pp3c12_17410 Physcomitrium patens HOM05D003722 ORTHO05D004589 6.3e-96 356.3 837 44.4
Os10g0396400 Oryza sativa ssp. japonica HOM05D003722 ORTHO05D004589 2.7e-94 350.9 652 58.6
Pp3c4_12360 Physcomitrium patens HOM05D003722 ORTHO05D004589 8.9e-90 335.9 825 53.9
Pp3c6_6070 Physcomitrium patens HOM05D003722 ORTHO05D004589 1.1e-84 318.9 930 42.9
SHI18847 Sapria himalayana HOM05D000105 ORTHO05D000023 4.1e-79 300.4 422 52.1
Cc08_g01170 Coffea canephora HOM05D003722 ORTHO05D004589 2.1e-75 288.1 484 60.7
MBI13_g31962_MAGBIO Magnolia biondii HOM05D003722 ORTHO05D004589 1.1e-74 285.8 586 56.3
CBR_g11995 Chara braunii HOM05D003722 ORTHO05D004589 1.0e-69 269.2 944 44.7
Sc09g0010110 Simmondsia chinensis HOM05D003722 ORTHO05D004589 2.8e-67 261.2 673 48.6
Cc08_g01160 Coffea canephora HOM05D003722 ORTHO05D004589 6.2e-67 260.0 265 64.2
Zm00001eb048660 Zea mays HOM05D003722 ORTHO05D004589 5.2e-66 256.9 431 46.4
AagrBONN_evm.TU.Sc2ySwM_117.2463 Anthoceros agrestis HOM05D003722 ORTHO05D004589 3.0e-61 241.1 606 57.8
MBI13_g13882_MAGBIO Magnolia biondii HOM05D003722 ORTHO05D004589 2.0e-57 228.4 323 57.9
Zm00001eb223490 Zea mays HOM05D003722 ORTHO05D004589 5.4e-55 220.3 392 45.7
Psat3g079480 Pisum sativum HOM05D003722 ORTHO05D004589 7.6e-49 199.9 136 75.0
Ah.11g044300 Amaranthus hybridus HOM05D003722 ORTHO05D004589 2.1e-46 191.8 222 50.0
Oeu028128.1 Olea europaea HOM05D003722 ORTHO05D004589 1.8e-45 188.7 244 87.7
Actinidia25691 Actinidia chinensis HOM05D003722 ORTHO05D004589 4.8e-35 154.1 250 39.2
VMungo0720G2633 Vigna mungo HOM05D003722 ORTHO05D004589 4.6e-30 137.5 146 53.4
Gohir.A06G081780 Gossypium hirsutum HOM05D003722 ORTHO05D004589 1.3e-27 129.4 186 41.4
VMungo0251G0605 Vigna mungo HOM05D003722 ORTHO05D001926 9.4e-23 113.2 121 54.5
Psat5g213240 Pisum sativum HOM05D003722 ORTHO05D004589 1.2e-22 112.8 71 76.1
Cpa.g.sc126.26 Carica papaya HOM05D003722 ORTHO05D004589 4.3e-20 104.4 81 64.2
SalBow1G8614 Salvia bowleyana HOM05D003722 ORTHO05D050768 1.7e-19 102.4 239 74.9
ECA236G4568 Erigeron canadensis HOM05D000007 ORTHO05D000039 3.1e-18 98.2 66 75.8
Mapoly0101s0054 Marchantia polymorpha HOM05D003722 ORTHO05D004589 1.1e-10 73.2 61 54.1
Sc09g0009810 Simmondsia chinensis HOM05D003722 ORTHO05D004589 1.7e-08 65.9 67 52.2
Psat5g114640 Pisum sativum HOM05D003722 ORTHO05D004589 6.1e-06 57.4 184 28.8


User provided reference genes

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