Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g8124 Utricularia gibba HOM05D007275 ORTHO05D009279 2.8e-58 228.4 116 100.0
SalBow1G5261 Salvia bowleyana HOM05D007275 ORTHO05D009279 3.2e-30 135.2 92 73.9
SalBow1G0766 Salvia bowleyana HOM05D007275 ORTHO05D009279 9.4e-30 133.7 92 72.8
Oeu038573.1 Olea europaea HOM05D007275 ORTHO05D009279 1.0e-28 130.2 87 77.0
Migut.A00668 Erythranthe guttata HOM05D007275 ORTHO05D009279 2.3e-28 129.0 90 74.4
Dinv38844 Davidia involucrata HOM05D007275 ORTHO05D009279 2.0e-27 125.9 90 71.1
Hma1.2p1_0359F.1_g135280 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 7.4e-27 124.0 86 74.4
Cc08_g15930 Coffea canephora HOM05D007275 ORTHO05D009279 9.7e-27 123.6 87 72.4
Peaxi162Scf00074g01033 Petunia axillaris HOM05D007275 ORTHO05D009279 4.8e-26 121.3 89 68.5
Actinidia22145 Actinidia chinensis HOM05D007275 ORTHO05D009279 6.3e-26 120.9 90 70.0
CAN.G532.107 Capsicum annuum HOM05D007275 ORTHO05D009279 6.3e-26 120.9 90 68.9
CSS0010422 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 8.2e-26 120.6 90 68.9
GSVIVG01019513001 Vitis vinifera HOM05D007275 ORTHO05D009279 8.2e-26 120.6 91 69.2
Lsat_1_v5_gn_3_10301 Lactuca sativa HOM05D007275 ORTHO05D009279 1.1e-25 120.2 90 67.8
arahy.Tifrunner.gnm1.ann1.GQP3LI Arachis hypogaea HOM05D007275 ORTHO05D009279 1.4e-25 119.8 86 72.1
arahy.Tifrunner.gnm1.ann1.IALD8X Arachis hypogaea HOM05D007275 ORTHO05D009279 1.4e-25 119.8 86 72.1
Gohir.A12G235700 Gossypium hirsutum HOM05D007275 ORTHO05D009279 1.4e-25 119.8 90 68.9
Gohir.D12G236900 Gossypium hirsutum HOM05D007275 ORTHO05D009279 1.4e-25 119.8 90 68.9
Gorai.008G253500 Gossypium raimondii HOM05D007275 ORTHO05D009279 1.4e-25 119.8 90 68.9
Prupe.5G117300 Prunus persica HOM05D007275 ORTHO05D009279 1.4e-25 119.8 86 69.8
ECA246G4125 Erigeron canadensis HOM05D007275 ORTHO05D009279 1.8e-25 119.4 91 67.0
EL10Ac5g12903 Beta vulgaris HOM05D007275 ORTHO05D009279 2.4e-25 119.0 90 67.8
COL.COLO4_10681 Corchorus olitorius HOM05D007275 ORTHO05D009279 2.4e-25 119.0 87 70.1
HanXRQChr06g0166541 Helianthus annuus HOM05D007275 ORTHO05D009279 3.1e-25 118.6 90 65.6
MD14G1123400 Malus domestica HOM05D007275 ORTHO05D009279 3.1e-25 118.6 92 64.1
Nitab4.5_0010144g0020 Nicotiana tabacum HOM05D007275 ORTHO05D009279 3.1e-25 118.6 90 67.8
CSS0024458 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 4.1e-25 118.2 90 68.9
PGSC0003DMG400012158 Solanum tuberosum HOM05D007275 ORTHO05D009279 4.1e-25 118.2 90 68.9
Thecc.03G296000 Theobroma cacao HOM05D007275 ORTHO05D009279 4.1e-25 118.2 90 67.8
Nitab4.5_0000223g0330 Nicotiana tabacum HOM05D007275 ORTHO05D009279 5.3e-25 117.9 90 66.7
AUR62010827 Chenopodium quinoa HOM05D007275 ORTHO05D009279 7.0e-25 117.5 90 67.8
Gohir.D11G024100 Gossypium hirsutum HOM05D007275 ORTHO05D009279 7.0e-25 117.5 89 67.4
Gorai.007G025800 Gossypium raimondii HOM05D007275 ORTHO05D009279 7.0e-25 117.5 89 67.4
HanXRQChr17g0535191 Helianthus annuus HOM05D007275 ORTHO05D009279 9.1e-25 117.1 88 64.8
CANSAT21G2355 Cannabis sativa HOM05D007275 ORTHO05D009279 1.2e-24 116.7 93 62.4
Gohir.A11G024400 Gossypium hirsutum HOM05D007275 ORTHO05D009279 1.2e-24 116.7 89 67.4
Sc01g0010220 Simmondsia chinensis HOM05D007275 ORTHO05D009279 1.2e-24 116.7 90 68.9
Ciclev10024283m.g Citrus clementina HOM05D007275 ORTHO05D009279 1.6e-24 116.3 87 69.0
Nitab4.5_0000726g0090 Nicotiana tabacum HOM05D007275 ORTHO05D009279 1.6e-24 116.3 87 67.8
Hma1.2p1_0229F.1_g097175 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 2.0e-24 115.9 89 66.3
Hma1.2p1_0229F.1_g097200 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 2.0e-24 115.9 89 66.3
MD06G1104700 Malus domestica HOM05D007275 ORTHO05D009279 2.6e-24 115.5 92 62.0
PGR031G2423 Punica granatum HOM05D007275 ORTHO05D009279 3.5e-24 115.2 90 65.6
CiPaw.12G084200 Carya illinoinensis HOM05D007275 ORTHO05D009279 4.5e-24 114.8 90 64.4
Eucgr.D01727 Eucalyptus grandis HOM05D007275 ORTHO05D009279 5.9e-24 114.4 90 65.6
Solyc08g082160.3 Solanum lycopersicum HOM05D007275 ORTHO05D009279 5.9e-24 114.4 90 66.7
Sopen08g030440 Solanum pennellii HOM05D007275 ORTHO05D009279 5.9e-24 114.4 90 66.7
Sabra03G0100000 Salix brachista HOM05D007275 ORTHO05D009279 7.7e-24 114.0 91 64.8
Nn1g01839 Nelumbo nucifera HOM05D007275 ORTHO05D009279 1.0e-23 113.6 89 66.3
Nn3g19047 Nelumbo nucifera HOM05D007275 ORTHO05D009279 1.3e-23 113.2 94 64.9
Phvul.002G297500 Phaseolus vulgaris HOM05D007275 ORTHO05D009279 1.7e-23 112.8 86 69.8
Cfa012796 Carpinus fangiana HOM05D007275 ORTHO05D009279 2.2e-23 112.5 86 67.4
Peaxi162Scf00117g01123 Petunia axillaris HOM05D007275 ORTHO05D009279 2.2e-23 112.5 87 66.7
Atru.chr9.2015 Acer truncatum HOM05D007275 ORTHO05D009279 2.9e-23 112.1 89 65.2
Haze_08628 Corylus avellana HOM05D007275 ORTHO05D009279 2.9e-23 112.1 86 66.3
DCAR_005035 Daucus carota HOM05D007275 ORTHO05D009279 3.8e-23 111.7 87 65.5
QL02p030913 Quercus lobata HOM05D007275 ORTHO05D009279 3.8e-23 111.7 86 65.1
TAR375G1117 Trochodendron aralioides HOM05D007275 ORTHO05D009279 5.0e-23 111.3 94 63.8
Manes.02G011100 Manihot esculenta HOM05D007275 ORTHO05D009279 6.5e-23 110.9 87 67.8
Potri.003G138800 Populus trichocarpa HOM05D007275 ORTHO05D009279 8.5e-23 110.5 89 64.0
RcHm_v2.0_Chr7g0195121 Rosa chinensis HOM05D007275 ORTHO05D009279 1.1e-22 110.2 86 67.4
TAR629G0721 Trochodendron aralioides HOM05D007275 ORTHO05D010861 1.1e-22 110.2 98 60.2
Potri.001G092700 Populus trichocarpa HOM05D007275 ORTHO05D009279 1.5e-22 109.8 86 68.6
Glyma.08G022200 Glycine max HOM05D007275 ORTHO05D009279 1.9e-22 109.4 83 68.7
Dinv37542 Davidia involucrata HOM05D007275 ORTHO05D009279 2.5e-22 109.0 82 70.7
Lalb_Chr16g0390621 Lupinus albus HOM05D007275 ORTHO05D009279 2.5e-22 109.0 89 62.9
Oeu063532.1 Olea europaea HOM05D007275 ORTHO05D009279 3.2e-22 108.6 82 65.9
Sabra01G0069000 Salix brachista HOM05D007275 ORTHO05D009279 3.2e-22 108.6 86 67.4
MBI06_g46619_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D009279 4.2e-22 108.2 89 64.0
MBI06_g46730_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D000022 4.2e-22 108.2 89 64.0
Glyma.05G216300 Glycine max HOM05D007275 ORTHO05D009279 5.5e-22 107.8 83 67.5
TPR.G3422 Trifolium pratense HOM05D007275 ORTHO05D009279 4.7e-21 104.8 86 61.6
FvH4_3g01740 Fragaria vesca HOM05D007275 ORTHO05D009279 8.0e-21 104.0 87 64.4
Lj4g0015273 Lotus japonicus HOM05D007275 ORTHO05D009279 1.0e-20 103.6 83 65.1
Aqoxy7G00131 Aquilegia oxysepala HOM05D007275 ORTHO05D009279 1.4e-20 103.2 91 58.2
FvH4_5g04420 Fragaria vesca HOM05D007275 ORTHO05D009279 1.4e-20 103.2 87 62.1
FAN18G1142 Fragaria x ananassa HOM05D007275 ORTHO05D009279 1.4e-20 103.2 87 62.1
FAN18G2266 Fragaria x ananassa HOM05D007275 ORTHO05D009279 1.4e-20 103.2 87 62.1
Zm00001eb338790 Zea mays HOM05D007275 ORTHO05D009279 1.4e-20 103.2 91 61.5
ClCG07G014960 Citrullus lanatus HOM05D007275 ORTHO05D009279 5.2e-20 101.3 85 61.2
MELO3C032816.2 Cucumis melo HOM05D007275 ORTHO05D009279 6.8e-20 100.9 91 60.4
CsaV3_4G006490 Cucumis sativus L. HOM05D007275 ORTHO05D009279 6.8e-20 100.9 91 60.4
FAN08G0060 Fragaria x ananassa HOM05D007275 ORTHO05D009279 6.8e-20 100.9 86 62.8
TWI60G1254 Tripterygium wilfordii HOM05D007275 ORTHO05D009279 8.8e-20 100.5 87 60.9
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 1.2e-19 100.1 68 72.1
CDE10G0124 Ceratophyllum demersum HOM05D007275 ORTHO05D009279 1.2e-19 100.1 84 61.9
Hma1.2p1_2596F.1_g325120 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 1.5e-19 99.8 67 74.6
BcaC09g50944 Brassica carinata HOM05D007275 ORTHO05D009279 1.3e-18 96.7 92 52.2
A01p15130 Brassica napus HOM05D007275 ORTHO05D009279 1.3e-18 96.7 92 52.2
C01p19030 Brassica napus HOM05D007275 ORTHO05D009279 1.3e-18 96.7 92 52.2
BolC1t01829H Brassica oleracea HOM05D007275 ORTHO05D009279 1.3e-18 96.7 92 52.2
AUR62019826 Chenopodium quinoa HOM05D007275 ORTHO05D009279 1.3e-18 96.7 71 67.6
Medtr8g099385 Medicago truncatula HOM05D007275 ORTHO05D009279 1.3e-18 96.7 86 57.0
Sed0004885 Sechium edule HOM05D007275 ORTHO05D009279 4.8e-18 94.7 101 55.4
BcaNung01088 Brassica carinata HOM05D007275 ORTHO05D009279 1.1e-17 93.6 88 53.4
BcaNung01089 Brassica carinata HOM05D007275 ORTHO05D009279 1.1e-17 93.6 88 53.4
Duzib068G1121 Durio zibethinus HOM05D007275 ORTHO05D009279 3.1e-17 92.0 67 70.1
Nitab4.5_0007661g0010 Nicotiana tabacum HOM05D007275 ORTHO05D009279 3.1e-17 92.0 74 59.5
CSS0026606 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 1.6e-16 89.7 64 67.2
CDE10G0242 Ceratophyllum demersum HOM05D000974 ORTHO05D002201 1.6e-16 89.7 81 56.8
FAN13G1788 Fragaria x ananassa HOM05D007275 ORTHO05D009279 1.6e-16 89.7 115 47.0
ATR0320G041 Amborella trichopoda HOM05D007275 ORTHO05D009279 3.5e-16 88.6 89 52.8
Psat7g026480 Pisum sativum HOM05D007275 ORTHO05D009279 1.0e-15 87.0 90 53.3
Rhsim02G0242000 Rhododendron simsii HOM05D007275 ORTHO05D009279 2.9e-15 85.5 67 67.2
SEGI_25349 Sequoiadendron giganteum HOM05D007275 ORTHO05D009279 8.5e-15 84.0 91 47.3
Thhalv10027148m.g Eutrema salsugineum HOM05D007275 ORTHO05D009279 9.8e-11 70.5 72 51.4
Lalb_Chr16g0390631 Lupinus albus HOM05D007275 ORTHO05D009279 3.1e-09 65.5 63 54.0
FAN04G0348 Fragaria x ananassa HOM05D007275 ORTHO05D009279 1.1e-06 57.0 87 41.4


User provided reference genes

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