Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g8030 Utricularia gibba HOM05D004945 ORTHO05D005536 3.8e-47 191.0 89 100.0
unitig_32.g11008 Utricularia gibba HOM05D004945 ORTHO05D005536 5.3e-41 170.6 86 90.7
Actinidia38805 Actinidia chinensis HOM05D004945 ORTHO05D005536 7.4e-35 150.2 91 74.7
CSS0028266 Camellia sinensis var. sinensis HOM05D004945 ORTHO05D005536 2.2e-34 148.7 91 75.8
DCAR_007670 Daucus carota HOM05D004945 ORTHO05D005536 2.8e-34 148.3 89 75.3
TAR625G1304 Trochodendron aralioides HOM05D004945 ORTHO05D005536 3.1e-33 144.8 91 72.5
ATR0626G412 Amborella trichopoda HOM05D004945 ORTHO05D005536 1.6e-32 142.5 85 74.1
Hma1.2p1_1111F.1_g258380 Hydrangea macrophylla HOM05D004945 ORTHO05D005536 1.6e-32 142.5 89 70.8
TAR636G3350 Trochodendron aralioides HOM05D004945 ORTHO05D005536 3.5e-32 141.4 91 72.5
Rhsim08G0249700 Rhododendron simsii HOM05D004945 ORTHO05D005536 4.5e-32 141.0 93 68.8
Sc12g0011140 Simmondsia chinensis HOM05D004945 ORTHO05D005536 4.5e-32 141.0 89 69.7
Migut.I01191 Erythranthe guttata HOM05D004945 ORTHO05D005536 5.9e-32 140.6 84 76.2
Hma1.2p1_0517F.1_g170730 Hydrangea macrophylla HOM05D004945 ORTHO05D005536 7.7e-32 140.2 91 74.7
PGR142G1282 Punica granatum HOM05D004945 ORTHO05D005536 7.7e-32 140.2 91 69.2
Solyc06g063310.2 Solanum lycopersicum HOM05D004945 ORTHO05D005536 2.9e-31 138.3 89 70.8
Sopen06g022780 Solanum pennellii HOM05D004945 ORTHO05D005536 2.9e-31 138.3 89 70.8
Eucgr.C00118 Eucalyptus grandis HOM05D004945 ORTHO05D005536 5.0e-31 137.5 92 66.3
Migut.D00890 Erythranthe guttata HOM05D004945 ORTHO05D005536 6.5e-31 137.1 92 68.5
Sc15g0001010 Simmondsia chinensis HOM05D004945 ORTHO05D005536 1.1e-30 136.3 89 66.3
PGSC0003DMG400026503 Solanum tuberosum HOM05D004945 ORTHO05D005536 1.1e-30 136.3 89 69.7
Cpa.g.sc95.12 Carica papaya HOM05D004945 ORTHO05D005536 1.5e-30 136.0 91 69.2
CiPaw.10G063900 Carya illinoinensis HOM05D004945 ORTHO05D005536 1.5e-30 136.0 93 68.8
Potri.006G075600 Populus trichocarpa HOM05D004945 ORTHO05D005536 1.5e-30 136.0 91 65.9
Prupe.1G075600 Prunus persica HOM05D004945 ORTHO05D005536 1.5e-30 136.0 88 68.2
PSO063G0987 Papaver somniferum HOM05D004945 ORTHO05D005536 1.9e-30 135.6 89 66.3
PSO170G0997 Papaver somniferum HOM05D004945 ORTHO05D005536 1.9e-30 135.6 89 66.3
TWI63G0641 Tripterygium wilfordii HOM05D004945 ORTHO05D005536 1.9e-30 135.6 92 65.2
CDE04G2745 Ceratophyllum demersum HOM05D004945 ORTHO05D005536 2.5e-30 135.2 89 68.5
CiPaw.09G075900 Carya illinoinensis HOM05D004945 ORTHO05D005536 4.2e-30 134.4 88 68.2
Nitab4.5_0003757g0090 Nicotiana tabacum HOM05D004945 ORTHO05D005536 4.2e-30 134.4 85 71.8
Sabra18G0116400 Salix brachista HOM05D004945 ORTHO05D005536 4.2e-30 134.4 88 68.2
Aqoxy7G02794 Aquilegia oxysepala HOM05D004945 ORTHO05D005536 7.2e-30 133.7 92 67.4
MD07G1027600 Malus domestica HOM05D004945 ORTHO05D005536 7.2e-30 133.7 88 69.3
TWI34G0510 Tripterygium wilfordii HOM05D004945 ORTHO05D005536 7.2e-30 133.7 92 66.3
Potri.018G142500 Populus trichocarpa HOM05D004945 ORTHO05D005536 1.2e-29 132.9 91 67.0
ClCG06G013580 Citrullus lanatus HOM05D004945 ORTHO05D005536 1.6e-29 132.5 91 67.0
Cc04_g00230 Coffea canephora HOM05D004945 ORTHO05D005536 1.6e-29 132.5 88 68.2
Thecc.09G185900 Theobroma cacao HOM05D004945 ORTHO05D005536 1.6e-29 132.5 91 67.0
QL11p013920 Quercus lobata HOM05D004945 ORTHO05D005536 2.1e-29 132.1 90 64.4
COL.COLO4_22793 Corchorus olitorius HOM05D004945 ORTHO05D005536 2.7e-29 131.7 91 64.8
QL11p014429 Quercus lobata HOM05D004945 ORTHO05D005536 2.7e-29 131.7 90 63.3
CAN.G308.14 Capsicum annuum HOM05D004945 ORTHO05D005536 3.6e-29 131.3 86 69.8
Haze_06091 Corylus avellana HOM05D004945 ORTHO05D005536 4.7e-29 131.0 93 65.6
Manes.06G020000 Manihot esculenta HOM05D004945 ORTHO05D005536 4.7e-29 131.0 88 64.8
COL.COLO4_08559 Corchorus olitorius HOM05D004945 ORTHO05D005536 6.1e-29 130.6 91 63.7
FvH4_4g07310 Fragaria vesca HOM05D004945 ORTHO05D005536 6.1e-29 130.6 91 68.1
MD13G1241900 Malus domestica HOM05D004945 ORTHO05D005536 8.0e-29 130.2 88 68.2
Aqoxy1G01195 Aquilegia oxysepala HOM05D004945 ORTHO05D005536 1.4e-28 129.4 91 67.0
MELO3C017430.2 Cucumis melo HOM05D004945 ORTHO05D005536 1.4e-28 129.4 91 65.9
Duzib150G0603 Durio zibethinus HOM05D004945 ORTHO05D005536 2.3e-28 128.6 82 65.9
Lalb_Chr11g0074741 Lupinus albus HOM05D004945 ORTHO05D005536 2.3e-28 128.6 89 60.7
Atru.chr7.757 Acer truncatum HOM05D004945 ORTHO05D005536 3.0e-28 128.3 88 64.8
Atru.chr7.779 Acer truncatum HOM05D004945 ORTHO05D005536 3.0e-28 128.3 88 64.8
THA.LOC104803956 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 4.0e-28 127.9 91 67.0
THA.LOC104803979 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 4.0e-28 127.9 91 67.0
FAN07G0945 Fragaria x ananassa HOM05D004945 ORTHO05D005536 5.2e-28 127.5 91 67.0
Sed0015624 Sechium edule HOM05D004945 ORTHO05D005536 5.2e-28 127.5 91 65.9
Glyma.15G165900 Glycine max HOM05D004945 ORTHO05D005536 6.7e-28 127.1 88 60.2
Ah.13g075140 Amaranthus hybridus HOM05D004945 ORTHO05D005536 8.8e-28 126.7 85 65.9
CsaV3_1G031860 Cucumis sativus L. HOM05D004945 ORTHO05D005536 8.8e-28 126.7 91 65.9
Sed0005101 Sechium edule HOM05D004945 ORTHO05D005536 1.5e-27 125.9 91 64.8
THA.LOC104820006 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 2.6e-27 125.2 91 63.7
Ah.04g153390 Amaranthus hybridus HOM05D004945 ORTHO05D005536 3.3e-27 124.8 85 63.5
AUR62018340 Chenopodium quinoa HOM05D004945 ORTHO05D005536 3.3e-27 124.8 85 62.4
AUR62044702 Chenopodium quinoa HOM05D004945 ORTHO05D005536 3.3e-27 124.8 85 62.4
AUR62044703 Chenopodium quinoa HOM05D004945 ORTHO05D005536 3.3e-27 124.8 85 62.4
Ciclev10010043m.g Citrus clementina HOM05D004945 ORTHO05D005536 3.3e-27 124.8 88 61.4
CANSAT11G0762 Cannabis sativa HOM05D004945 ORTHO05D005536 4.4e-27 124.4 88 65.9
Gorai.004G025200 Gossypium raimondii HOM05D004945 ORTHO05D005536 5.7e-27 124.0 91 61.5
Lj6g0012502 Lotus japonicus HOM05D004945 ORTHO05D005536 5.7e-27 124.0 88 60.2
Glyma.09G059600 Glycine max HOM05D004945 ORTHO05D005536 7.5e-27 123.6 88 59.1
SHI03058 Sapria himalayana HOM05D004945 ORTHO05D005536 7.5e-27 123.6 93 61.3
QL11p013931 Quercus lobata HOM05D004945 ORTHO05D005536 9.7e-27 123.2 90 63.3
RcHm_v2.0_Chr4g0399651 Rosa chinensis HOM05D004945 ORTHO05D005536 9.7e-27 123.2 88 63.6
AUR62023991 Chenopodium quinoa HOM05D004945 ORTHO05D005536 1.3e-26 122.9 85 61.2
Duzib150G1578 Durio zibethinus HOM05D004945 ORTHO05D005536 1.3e-26 122.9 91 61.5
Gohir.D13G212800 Gossypium hirsutum HOM05D004945 ORTHO05D005536 1.3e-26 122.9 88 61.4
Gorai.013G243200 Gossypium raimondii HOM05D004945 ORTHO05D005536 1.3e-26 122.9 88 61.4
Lsat_1_v5_gn_1_39460 Lactuca sativa HOM05D004945 ORTHO05D005536 1.3e-26 122.9 91 61.5
AUR62031980 Chenopodium quinoa HOM05D004945 ORTHO05D005536 1.7e-26 122.5 84 61.9
Gohir.A13G208400 Gossypium hirsutum HOM05D004945 ORTHO05D005536 2.2e-26 122.1 88 61.4
arahy.Tifrunner.gnm1.ann1.M8DR4H Arachis hypogaea HOM05D004945 ORTHO05D005536 2.8e-26 121.7 80 65.0
arahy.Tifrunner.gnm1.ann1.ZYC9F0 Arachis hypogaea HOM05D004945 ORTHO05D005536 2.8e-26 121.7 80 65.0
EL10Ac3g07227 Beta vulgaris HOM05D004945 ORTHO05D005536 2.8e-26 121.7 85 61.2
AUR62030327 Chenopodium quinoa HOM05D004945 ORTHO05D005536 2.8e-26 121.7 84 61.9
Gohir.D08G028100 Gossypium hirsutum HOM05D004945 ORTHO05D005536 2.8e-26 121.7 91 60.4
QL11p014451 Quercus lobata HOM05D004945 ORTHO05D005536 2.8e-26 121.7 90 63.3
Gohir.A13G208500 Gossypium hirsutum HOM05D004945 ORTHO05D005536 4.8e-26 120.9 88 60.2
Phvul.007G156600 Phaseolus vulgaris HOM05D004945 ORTHO05D005536 4.8e-26 120.9 88 59.1
Gohir.D13G212900 Gossypium hirsutum HOM05D004945 ORTHO05D005536 8.3e-26 120.2 88 59.1
BcaB03g12628 Brassica carinata HOM05D004945 ORTHO05D005536 1.1e-25 119.8 91 61.5
Gohir.A08G017500 Gossypium hirsutum HOM05D004945 ORTHO05D005536 1.8e-25 119.0 91 59.3
THA.LOC104814658 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 3.1e-25 118.2 91 62.6
CARHR237930 Cardamine hirsuta HOM05D004945 ORTHO05D005536 4.1e-25 117.9 91 62.6
Sp7g27810 Schrenkiella parvula HOM05D004945 ORTHO05D005536 4.1e-25 117.9 91 61.5
BcaC01g01207 Brassica carinata HOM05D004945 ORTHO05D005536 5.3e-25 117.5 91 60.4
A08p19460 Brassica napus HOM05D004945 ORTHO05D005536 5.3e-25 117.5 91 60.4
C03p88960 Brassica napus HOM05D004945 ORTHO05D005536 5.3e-25 117.5 91 60.4
BolC3t21206H Brassica oleracea HOM05D004945 ORTHO05D005536 5.3e-25 117.5 91 60.4
BraA08t33908Z Brassica rapa HOM05D004945 ORTHO05D005536 5.3e-25 117.5 91 60.4
TPR.G7575 Trifolium pratense HOM05D004945 ORTHO05D005536 5.3e-25 117.5 88 60.2
Psat1g144160 Pisum sativum HOM05D004945 ORTHO05D005536 9.1e-25 116.7 88 60.2
Ca_02105_v3 Cicer arietinum L. HOM05D004945 ORTHO05D005536 1.2e-24 116.3 88 60.2
Carub.0007s1064 Capsella rubella HOM05D004945 ORTHO05D005536 1.6e-24 115.9 91 61.5
Medtr2g037990 Medicago truncatula HOM05D004945 ORTHO05D005536 1.6e-24 115.9 88 60.2
Thhalv10026677m.g Eutrema salsugineum HOM05D004945 ORTHO05D005536 2.7e-24 115.2 91 61.5
AL7G22230 Arabidopsis lyrata HOM05D004945 ORTHO05D005536 5.9e-24 114.0 91 60.4
A03p59370 Brassica napus HOM05D004945 ORTHO05D005536 5.9e-24 114.0 91 61.5
C07p57400 Brassica napus HOM05D004945 ORTHO05D005536 5.9e-24 114.0 91 61.5
BolC7t46209H Brassica oleracea HOM05D004945 ORTHO05D005536 5.9e-24 114.0 91 61.5
BraA03t14994Z Brassica rapa HOM05D004945 ORTHO05D005536 5.9e-24 114.0 91 61.5
MD10G1108200 Malus domestica HOM05D004945 ORTHO05D005536 7.7e-24 113.6 85 58.8
AT4G30010 Arabidopsis thaliana HOM05D004945 ORTHO05D005536 2.2e-23 112.1 91 58.2
BcaNung00508 Brassica carinata HOM05D004945 ORTHO05D005536 2.2e-23 112.1 91 59.3
Aa31LG2G20550 Aethionema arabicum HOM05D004945 ORTHO05D005536 1.9e-22 109.0 90 57.8
Psat1g144120 Pisum sativum HOM05D004945 ORTHO05D005536 2.5e-22 108.6 88 58.0
THA.LOC104811777 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 1.8e-20 102.4 81 53.1
Dinv25512 Davidia involucrata HOM05D004945 ORTHO05D005536 2.0e-19 99.0 65 70.8
THA.LOC109116878 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 9.8e-19 96.7 62 72.6
ECA247G2100 Erigeron canadensis HOM05D004945 ORTHO05D005536 2.8e-18 95.1 89 49.4
Os02g0175800 Oryza sativa ssp. japonica HOM05D004945 ORTHO05D005536 7.0e-17 90.5 83 45.8
A01p08110 Brassica napus HOM05D004945 ORTHO05D005536 9.1e-17 90.1 80 50.0
BcaB03g15243 Brassica carinata HOM05D004945 ORTHO05D005536 2.0e-16 89.0 75 53.3
HanXRQChr15g0497481 Helianthus annuus HOM05D004945 ORTHO05D005536 1.5e-14 82.8 60 58.3
Nitab4.5_0006750g0010 Nicotiana tabacum HOM05D004945 ORTHO05D005536 1.9e-14 82.4 57 59.6
Nitab4.5_0000617g0120 Nicotiana tabacum HOM05D004945 ORTHO05D005536 3.3e-14 81.6 52 67.3
PGSC0003DMG400028757 Solanum tuberosum HOM05D004945 ORTHO05D005536 6.1e-13 77.4 50 68.0
SMO361G0023 Selaginella moellendorffii HOM05D004945 ORTHO05D005536 4.0e-12 74.7 83 37.3
GSVIVG01010862001 Vitis vinifera HOM05D004945 ORTHO05D005536 2.6e-11 72.0 56 58.9
arahy.Tifrunner.gnm1.ann1.2FH55K Arachis hypogaea HOM05D004945 ORTHO05D005536 7.5e-11 70.5 54 59.3
arahy.Tifrunner.gnm1.ann1.U71V3Q Arachis hypogaea HOM05D004945 ORTHO05D005536 1.7e-10 69.3 53 60.4
Nn8g40786 Nelumbo nucifera HOM05D004945 ORTHO05D005536 4.9e-10 67.8 44 63.6
Nitab4.5_0002354g0060 Nicotiana tabacum HOM05D004945 ORTHO05D005536 8.3e-10 67.0 45 64.4
Oeu001819.1 Olea europaea HOM05D004945 ORTHO05D005536 1.1e-09 66.6 78 44.9
Dinv24096 Davidia involucrata HOM05D019947 ORTHO05D005536 1.4e-09 66.2 43 67.4
Dinv44937 Davidia involucrata HOM05D004945 ORTHO05D005536 1.4e-09 66.2 43 67.4
BcaC09g51779 Brassica carinata HOM05D004945 ORTHO05D005536 1.0e-07 60.1 71 40.8
BcaNung06654 Brassica carinata HOM05D004945 ORTHO05D005536 1.0e-07 60.1 71 40.8
Pp3c25_5460 Physcomitrium patens HOM05D004945 ORTHO05D005536 2.3e-07 58.9 89 36.0
Pp3c25_5480 Physcomitrium patens HOM05D004945 ORTHO05D005536 2.3e-07 58.9 89 36.0
AagrBONN_evm.TU.Sc2ySwM_344.4974 Anthoceros agrestis HOM05D004945 ORTHO05D005536 8.6e-07 57.0 83 34.9
AagrBONN_evm.TU.Sc2ySwM_228.1937 Anthoceros agrestis HOM05D004945 ORTHO05D005536 2.5e-06 55.5 76 32.9


User provided reference genes

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