Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g8008 Utricularia gibba HOM05D005651 ORTHO05D006877 0.0e+00 1829.7 942 100.0
SGA_v2.0_scaffold12G06118 Striga asiatica HOM05D005651 ORTHO05D006877 3.4e-271 938.7 1033 52.2
Migut.G00953 Erythranthe guttata HOM05D005651 ORTHO05D006877 1.4e-256 890.2 1046 49.6
SalBow1G5228 Salvia bowleyana HOM05D005651 ORTHO05D006877 3.7e-249 865.5 1019 48.1
SalBow1G5941 Salvia bowleyana HOM05D005651 ORTHO05D006877 6.3e-249 864.8 1019 48.1
Lj3C272T4 Lonicera japonica HOM05D005651 ORTHO05D006877 8.8e-219 764.6 998 44.3
RcHm_v2.0_Chr4g0412511 Rosa chinensis HOM05D005651 ORTHO05D006877 8.8e-219 764.6 1030 42.5
Sopen03g033090 Solanum pennellii HOM05D005651 ORTHO05D006877 2.2e-217 760.0 1041 43.9
Peaxi162Scf00017g02338 Petunia axillaris HOM05D005651 ORTHO05D006877 2.8e-217 759.6 1034 44.4
RcHm_v2.0_Chr4g0412451 Rosa chinensis HOM05D005651 ORTHO05D006877 2.8e-217 759.6 1036 42.2
FAN12G2514 Fragaria x ananassa HOM05D005651 ORTHO05D006877 6.3e-217 758.4 1030 42.1
Actinidia13837 Actinidia chinensis HOM05D005651 ORTHO05D006877 2.4e-216 756.5 1027 43.1
FvH4_4g12860 Fragaria vesca HOM05D005651 ORTHO05D006877 2.2e-214 750.0 1027 42.0
FAN07G2778 Fragaria x ananassa HOM05D005651 ORTHO05D006877 2.9e-214 749.6 1030 41.8
Cc03_g09140 Coffea canephora HOM05D005651 ORTHO05D006877 1.9e-213 746.9 1036 42.8
Prupe.1G172400 Prunus persica HOM05D005651 ORTHO05D006877 1.4e-211 740.7 1034 42.3
HanXRQChr14g0436391 Helianthus annuus HOM05D005651 ORTHO05D006877 4.9e-209 732.3 1027 42.4
COL.COLO4_35960 Corchorus olitorius HOM05D005651 ORTHO05D006877 6.3e-209 731.9 1006 41.8
FAN17G0433 Fragaria x ananassa HOM05D005651 ORTHO05D006877 1.8e-208 730.3 1030 41.2
TAR362G0451 Trochodendron aralioides HOM05D005651 ORTHO05D006877 2.0e-207 726.9 1030 42.1
Nitab4.5_0001422g0060 Nicotiana tabacum HOM05D005651 ORTHO05D006877 7.7e-207 724.9 1007 43.7
Oeu050724.1 Olea europaea HOM05D005651 ORTHO05D006877 1.3e-206 724.2 862 48.3
Cfa008665 Carpinus fangiana HOM05D005651 ORTHO05D006877 2.9e-206 723.0 860 45.9
MD04G1022200 Malus domestica HOM05D005651 ORTHO05D006877 3.8e-206 722.6 1055 40.4
Nitab4.5_0009569g0040 Nicotiana tabacum HOM05D005651 ORTHO05D006877 1.1e-205 721.1 1006 43.7
GSVIVG01031569001 Vitis vinifera HOM05D005651 ORTHO05D006877 1.2e-202 711.1 1035 40.8
Solyc03g114040.3 Solanum lycopersicum HOM05D005651 ORTHO05D006877 2.6e-202 709.9 1086 41.4
Thecc.04G191000 Theobroma cacao HOM05D005651 ORTHO05D006877 9.8e-202 708.0 1033 40.3
Nn8g41263 Nelumbo nucifera HOM05D005651 ORTHO05D006877 1.4e-200 704.1 996 41.7
CANSAT78G1330 Cannabis sativa HOM05D005651 ORTHO05D006877 1.7e-198 697.2 1035 41.1
Lsat_1_v5_gn_2_47921 Lactuca sativa HOM05D005651 ORTHO05D006877 1.9e-197 693.7 866 44.9
Gohir.D02G018500 Gossypium hirsutum HOM05D005651 ORTHO05D006877 9.5e-197 691.4 1029 39.9
QL06p027298 Quercus lobata HOM05D005651 ORTHO05D006877 9.5e-197 691.4 1048 39.9
Lj6g0020014 Lotus japonicus HOM05D005651 ORTHO05D006877 2.1e-196 690.3 1020 39.4
TPR.G18109 Trifolium pratense HOM05D005651 ORTHO05D006877 1.0e-195 688.0 1026 39.7
Gohir.A02G016900 Gossypium hirsutum HOM05D005651 ORTHO05D006877 1.8e-195 687.2 1029 39.9
Cpa.g.sc157.13 Carica papaya HOM05D005651 ORTHO05D006877 2.6e-194 683.3 1035 40.2
Gorai.005G022800 Gossypium raimondii HOM05D005651 ORTHO05D006877 3.7e-193 679.5 1029 39.7
PGR083G1656 Punica granatum HOM05D005651 ORTHO05D006877 3.7e-193 679.5 1043 38.9
Haze_11684 Corylus avellana HOM05D005651 ORTHO05D006877 4.9e-193 679.1 1143 37.4
PSO063G2404 Papaver somniferum HOM05D005651 ORTHO05D006877 1.4e-192 677.6 1035 40.0
Medtr3g084640 Medicago truncatula HOM05D005651 ORTHO05D006877 8.6e-190 668.3 1026 38.6
Glyma.11G253600 Glycine max HOM05D005651 ORTHO05D006877 1.9e-189 667.2 1027 38.4
Phvul.001G265000 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 3.3e-189 666.4 1026 38.8
Aqoxy2G04074 Aquilegia oxysepala HOM05D005651 ORTHO05D006877 1.6e-188 664.1 1045 39.8
ClCG08G003660 Citrullus lanatus HOM05D005651 ORTHO05D006877 9.8e-186 654.8 1033 38.4
arahy.Tifrunner.gnm1.ann1.RD9PAU Arachis hypogaea HOM05D005651 ORTHO05D006877 3.0e-182 643.3 1030 39.0
Sc25g0005740 Simmondsia chinensis HOM05D005651 ORTHO05D006877 3.3e-181 639.8 1033 38.5
Eucgr.H02630 Eucalyptus grandis HOM05D005651 ORTHO05D006877 7.3e-181 638.6 1037 37.1
Ca_16431_v3 Cicer arietinum L. HOM05D005651 ORTHO05D006877 1.6e-180 637.5 1032 38.0
CsaV3_6G003070 Cucumis sativus L. HOM05D005651 ORTHO05D006877 1.6e-180 637.5 1032 37.2
Rhsim02G0090700 Rhododendron simsii HOM05D005651 ORTHO05D006877 1.5e-178 630.9 898 41.5
VMungo1383G2894 Vigna mungo HOM05D005651 ORTHO05D006877 1.3e-177 627.9 866 41.8
arahy.Tifrunner.gnm1.ann1.4U9R65 Arachis hypogaea HOM05D005651 ORTHO05D006877 2.2e-177 627.1 1044 38.1
CAN.G781.41 Capsicum annuum HOM05D005651 ORTHO05D006877 6.4e-177 625.5 1012 40.0
AT4G14180 Arabidopsis thaliana HOM05D005651 ORTHO05D006877 1.4e-176 624.4 1036 37.4
Ciclev10004169m.g Citrus clementina HOM05D005651 ORTHO05D006877 1.9e-176 624.0 1039 37.2
Sabra02G0177500 Salix brachista HOM05D005651 ORTHO05D006877 2.4e-176 623.6 1020 38.8
Sed0004152 Sechium edule HOM05D005651 ORTHO05D006877 9.2e-176 621.7 1034 36.6
Potri.002G232700 Populus trichocarpa HOM05D005651 ORTHO05D006877 1.2e-175 621.3 1024 38.7
THA.LOC104808673 Tarenaya hassleriana HOM05D005651 ORTHO05D006877 2.7e-175 620.2 1040 36.9
Sp5g13520 Schrenkiella parvula HOM05D005651 ORTHO05D006877 1.7e-174 617.5 1038 38.0
AL7G42200 Arabidopsis lyrata HOM05D005651 ORTHO05D006877 5.1e-174 615.9 1033 37.9
MBI11_g07399_MAGBIO Magnolia biondii HOM05D005651 ORTHO05D006877 5.1e-174 615.9 1064 38.3
Carub.0007s2821 Capsella rubella HOM05D005651 ORTHO05D006877 1.9e-173 614.0 1038 37.8
Aa31LG9G3210 Aethionema arabicum HOM05D005651 ORTHO05D006877 6.9e-171 605.5 1029 37.4
arahy.Tifrunner.gnm1.ann1.9V91M6 Arachis hypogaea HOM05D005651 ORTHO05D006877 4.9e-169 599.4 842 41.3
arahy.Tifrunner.gnm1.ann1.EYX4BI Arachis hypogaea HOM05D005651 ORTHO05D006877 7.1e-168 595.5 849 41.5
C03p35350 Brassica napus HOM05D005651 ORTHO05D006877 1.3e-166 591.3 1038 37.2
A03p29160 Brassica napus HOM05D005651 ORTHO05D006877 1.7e-166 590.9 1037 36.4
BcaB01g02715 Brassica carinata HOM05D005651 ORTHO05D006877 5.6e-165 585.9 1035 36.0
BcaC01g04643 Brassica carinata HOM05D005651 ORTHO05D006877 1.1e-163 581.6 1047 36.8
BolC3t15845H Brassica oleracea HOM05D005651 ORTHO05D006877 1.1e-163 581.6 1047 36.8
ECA238G0348 Erigeron canadensis HOM05D005651 ORTHO05D006877 5.3e-163 579.3 831 42.0
PSO017G3585 Papaver somniferum HOM05D005651 ORTHO05D006877 1.9e-160 570.9 964 37.1
TWI56G0421 Tripterygium wilfordii HOM05D005651 ORTHO05D006877 1.4e-155 554.7 902 37.8
ATR0582G376 Amborella trichopoda HOM05D005651 ORTHO05D006877 6.9e-155 552.4 1032 35.8
Thhalv10027320m.g Eutrema salsugineum HOM05D005651 ORTHO05D006877 2.4e-152 543.9 1009 36.0
Duzib212G0903 Durio zibethinus HOM05D005651 ORTHO05D006877 4.6e-151 539.7 879 38.6
CARHR220210 Cardamine hirsuta HOM05D005651 ORTHO05D006877 1.9e-144 517.7 669 43.6
EL10Ac3g07437 Beta vulgaris HOM05D005651 ORTHO05D006877 2.1e-143 514.2 732 41.7
DCAR_026668 Daucus carota HOM05D005651 ORTHO05D006877 3.5e-143 513.5 1027 33.9
Manes.05G198800 Manihot esculenta HOM05D005651 ORTHO05D006877 2.5e-141 507.3 860 36.0
CiPaw.01G113500 Carya illinoinensis HOM05D005651 ORTHO05D006877 2.5e-136 490.7 797 38.1
Dinv32169 Davidia involucrata HOM05D005651 ORTHO05D006877 1.6e-135 488.0 463 53.8
Lalb_Chr24g0394531 Lupinus albus HOM05D005651 ORTHO05D006877 2.3e-134 484.2 864 36.3
Lj3A268T25 Lonicera japonica HOM05D005651 ORTHO05D006877 6.5e-129 466.1 475 51.6
CDE02G2388 Ceratophyllum demersum HOM05D005651 ORTHO05D006877 9.4e-128 462.2 660 42.6
AUR62018536 Chenopodium quinoa HOM05D005651 ORTHO05D006877 4.6e-127 459.9 780 38.2
AUR62020881 Chenopodium quinoa HOM05D005651 ORTHO05D006877 3.3e-125 453.8 818 36.3
SEGI_00340 Sequoiadendron giganteum HOM05D005651 ORTHO05D006877 3.7e-116 423.7 1097 30.1
Psat2g094320 Pisum sativum HOM05D005651 ORTHO05D006877 4.8e-116 423.3 584 41.8
Os04g0347800 Oryza sativa ssp. japonica HOM05D005651 ORTHO05D006877 9.1e-115 419.1 897 33.1
Atru.chr3.1766 Acer truncatum HOM05D005651 ORTHO05D006877 4.0e-102 377.1 410 49.8
Ah.04g149640 Amaranthus hybridus HOM05D005651 ORTHO05D006877 1.7e-97 361.7 722 33.8
Phvul.006G051700 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 1.5e-96 358.6 469 43.1
HPP92_024561 Vanilla planifolia HOM05D005651 ORTHO05D006877 1.0e-89 335.9 476 40.1
Zm00001eb389920 Zea mays HOM05D005651 ORTHO05D006877 1.7e-89 335.1 754 32.1
Atru.chr3.1765 Acer truncatum HOM05D005651 ORTHO05D006877 1.6e-87 328.6 605 36.4
SHI01044 Sapria himalayana HOM05D005651 ORTHO05D006877 3.2e-83 314.3 809 30.5
Dinv32168 Davidia involucrata HOM05D005651 ORTHO05D006877 3.5e-82 310.8 503 38.0
Lj3C268T6 Lonicera japonica HOM05D005651 ORTHO05D006877 5.6e-80 303.5 501 38.3
Phvul.004G062100 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 4.6e-74 283.9 653 31.2
MELO3C026127.2 Cucumis melo HOM05D005651 ORTHO05D006877 1.1e-72 279.3 601 32.9
Mapoly0195s0003 Marchantia polymorpha HOM05D005651 ORTHO05D006877 2.2e-68 265.0 696 27.9
Pp3c15_15330 Physcomitrium patens HOM05D005651 ORTHO05D006877 1.2e-58 232.6 689 24.7
vmacro15590 Vaccinium macrocarpon HOM05D005651 ORTHO05D006877 2.5e-48 198.4 413 32.7
SHI01039 Sapria himalayana HOM05D005651 ORTHO05D006877 1.5e-40 172.6 170 53.5
Prupe.1G176200 Prunus persica HOM05D005651 ORTHO05D006877 2.0e-37 162.2 315 37.1
HPP92_024560 Vanilla planifolia HOM05D005651 ORTHO05D006877 5.8e-37 160.6 333 33.0
Ah.04g149630 Amaranthus hybridus HOM05D005651 ORTHO05D006877 3.8e-36 157.9 154 51.3
BraA03t12111Z Brassica rapa HOM05D005651 ORTHO05D006877 3.3e-32 144.8 136 52.9
Lalb_Chr24g0394541 Lupinus albus HOM05D005651 ORTHO05D006877 1.3e-31 142.9 141 51.8
vmacro15591 Vaccinium macrocarpon HOM05D005651 ORTHO05D006877 6.0e-26 124.0 186 37.6
TWI56G0074 Tripterygium wilfordii HOM05D005651 ORTHO05D006877 7.4e-24 117.1 108 57.4
BcaB01g02718 Brassica carinata HOM05D005651 ORTHO05D006877 1.0e-20 106.7 107 49.5
CBR_g39378 Chara braunii HOM05D005651 ORTHO05D006877 3.1e-14 85.1 442 21.7
CARHR220220 Cardamine hirsuta HOM05D005651 ORTHO05D006877 6.9e-14 84.0 398 23.4
PGSC0003DMG400024589 Solanum tuberosum HOM05D005651 ORTHO05D006877 2.6e-13 82.0 97 46.4
Eucgr.F02519 Eucalyptus grandis HOM05D005651 ORTHO05D006877 5.0e-12 77.8 68 55.9
Psat0s1368g0040 Pisum sativum HOM05D005651 ORTHO05D006877 1.8e-06 59.3 64 40.6
HPP92_024556 Vanilla planifolia HOM05D005651 ORTHO05D006877 3.1e-06 58.5 100 34.0


User provided reference genes

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