Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g8003 Utricularia gibba HOM05D005286 ORTHO05D006348 1.2e-149 533.1 272 100.0
MSTRG.23499 Avicennia marina HOM05D005286 ORTHO05D006348 3.1e-100 369.0 244 75.4
SGA_v2.0_scaffold189G40378 Striga asiatica HOM05D005286 ORTHO05D006348 2.7e-96 355.9 256 71.1
Migut.H00797 Erythranthe guttata HOM05D005286 ORTHO05D006348 2.4e-92 342.8 253 71.1
Oeu037874.1 Olea europaea HOM05D005286 ORTHO05D006348 8.5e-90 334.3 254 68.5
Sopen12g030050 Solanum pennellii HOM05D005286 ORTHO05D006348 3.2e-81 305.8 259 61.0
Solyc12g088020.1 Solanum lycopersicum HOM05D005286 ORTHO05D006348 4.2e-81 305.4 259 60.2
FAN23G2334 Fragaria x ananassa HOM05D005286 ORTHO05D006348 6.1e-80 301.6 262 61.8
PGSC0003DMG400045338 Solanum tuberosum HOM05D005286 ORTHO05D006348 8.0e-80 301.2 255 60.0
Duzib147G1331 Durio zibethinus HOM05D005286 ORTHO05D006348 2.3e-79 299.7 267 59.6
FAN19G2916 Fragaria x ananassa HOM05D005286 ORTHO05D006348 2.3e-79 299.7 270 59.3
HanXRQChr01g0017141 Helianthus annuus HOM05D005286 ORTHO05D006348 2.3e-79 299.7 237 66.2
Lsat_1_v5_gn_1_78000 Lactuca sativa HOM05D005286 ORTHO05D006348 4.0e-79 298.9 237 65.0
FvH4_1g24860 Fragaria vesca HOM05D005286 ORTHO05D006348 5.2e-79 298.5 262 61.5
FAN28G1250 Fragaria x ananassa HOM05D005286 ORTHO05D006348 5.2e-79 298.5 262 61.5
CiPaw.03G118000 Carya illinoinensis HOM05D005286 ORTHO05D006348 1.2e-78 297.4 238 65.1
Ciclev10000962m.g Citrus clementina HOM05D005286 ORTHO05D006348 2.0e-78 296.6 264 60.2
FAN26G1990 Fragaria x ananassa HOM05D005286 ORTHO05D006348 2.0e-78 296.6 262 61.1
TWI75G1712 Tripterygium wilfordii HOM05D005286 ORTHO05D006348 2.0e-78 296.6 259 62.2
COL.COLO4_35813 Corchorus olitorius HOM05D005286 ORTHO05D006348 3.4e-78 295.8 266 58.6
Thecc.01G137300 Theobroma cacao HOM05D005286 ORTHO05D006348 5.7e-78 295.0 271 58.3
DCAR_019994 Daucus carota HOM05D005286 ORTHO05D006348 2.2e-77 293.1 262 61.1
GSVIVG01022340001 Vitis vinifera HOM05D005286 ORTHO05D006348 3.7e-77 292.4 263 58.9
CSS0004303 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 6.3e-77 291.6 240 64.2
CSS0034769 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 6.3e-77 291.6 240 64.2
CANSAT35G0194 Cannabis sativa HOM05D005286 ORTHO05D006348 6.3e-77 291.6 239 63.6
Gohir.A12G085400 Gossypium hirsutum HOM05D005286 ORTHO05D006348 6.3e-77 291.6 266 59.0
Manes.12G159000 Manihot esculenta HOM05D005286 ORTHO05D006348 1.8e-76 290.0 236 61.9
AL8G41150 Arabidopsis lyrata HOM05D005286 ORTHO05D006348 2.4e-76 289.7 240 63.8
Lj4A421T8 Lonicera japonica HOM05D005286 ORTHO05D006348 2.4e-76 289.7 263 58.9
Prupe.4G274700 Prunus persica HOM05D005286 ORTHO05D006348 4.1e-76 288.9 257 57.6
Gohir.D12G083400 Gossypium hirsutum HOM05D005286 ORTHO05D006348 5.4e-76 288.5 266 58.3
Gohir.D12G083401 Gossypium hirsutum HOM05D005286 ORTHO05D006348 5.4e-76 288.5 266 58.3
RcHm_v2.0_Chr2g0122521 Rosa chinensis HOM05D005286 ORTHO05D006348 7.0e-76 288.1 238 61.8
AT5G63910 Arabidopsis thaliana HOM05D005286 ORTHO05D006348 9.1e-76 287.7 240 63.3
Cfa021278 Carpinus fangiana HOM05D005286 ORTHO05D006348 9.1e-76 287.7 239 63.6
Nitab4.5_0000432g0040 Nicotiana tabacum HOM05D005286 ORTHO05D006348 1.2e-75 287.3 252 61.9
Duzib187G0999 Durio zibethinus HOM05D005286 ORTHO05D006348 1.6e-75 287.0 266 57.1
Lj1g0003788 Lotus japonicus HOM05D003519 ORTHO05D004443 2.0e-75 286.6 268 61.9
Nitab4.5_0000954g0020 Nicotiana tabacum HOM05D005286 ORTHO05D006348 2.0e-75 286.6 252 61.5
QL10p041275 Quercus lobata HOM05D005286 ORTHO05D006348 2.7e-75 286.2 240 62.1
ECA248G0233 Erigeron canadensis HOM05D005286 ORTHO05D006348 4.5e-75 285.4 267 58.8
Thhalv10004131m.g Eutrema salsugineum HOM05D005286 ORTHO05D006348 7.7e-75 284.6 240 62.1
Sabra07G0083800 Salix brachista HOM05D005286 ORTHO05D006348 1.0e-74 284.3 239 63.2
A06p30530 Brassica napus HOM05D005286 ORTHO05D006348 1.3e-74 283.9 240 61.7
BraA06t26002Z Brassica rapa HOM05D005286 ORTHO05D006348 1.3e-74 283.9 240 61.7
Gorai.008G094500 Gossypium raimondii HOM05D005286 ORTHO05D006348 1.3e-74 283.9 288 54.5
Potri.007G101600 Populus trichocarpa HOM05D005286 ORTHO05D006348 1.3e-74 283.9 239 63.2
Sc09g0002230 Simmondsia chinensis HOM05D005286 ORTHO05D006348 1.7e-74 283.5 239 60.3
BcaB02g09762 Brassica carinata HOM05D005286 ORTHO05D006348 2.2e-74 283.1 269 56.9
Carub.0008s2471 Capsella rubella HOM05D005286 ORTHO05D006348 5.0e-74 282.0 259 59.1
Actinidia16523 Actinidia chinensis HOM05D005286 ORTHO05D006348 1.9e-73 280.0 266 57.1
TAR625G0087 Trochodendron aralioides HOM05D005286 ORTHO05D006348 1.9e-73 280.0 241 61.4
PGR119G0364 Punica granatum HOM05D005286 ORTHO05D006348 2.5e-73 279.6 280 57.1
THA.LOC104819345 Tarenaya hassleriana HOM05D005286 ORTHO05D006348 2.5e-73 279.6 240 59.2
Atru.chr4.988 Acer truncatum HOM05D005286 ORTHO05D006348 3.2e-73 279.3 263 59.7
arahy.Tifrunner.gnm1.ann1.7K8RK5 Arachis hypogaea HOM05D005286 ORTHO05D006348 3.2e-73 279.3 253 59.3
MD15G1135000 Malus domestica HOM05D005286 ORTHO05D006348 3.2e-73 279.3 264 56.4
Rhsim08G0000400 Rhododendron simsii HOM05D005286 ORTHO05D006348 3.2e-73 279.3 237 60.8
Cc07_g21020 Coffea canephora HOM05D005286 ORTHO05D006348 4.2e-73 278.9 267 58.1
Eucgr.I00123 Eucalyptus grandis HOM05D005286 ORTHO05D006348 4.2e-73 278.9 244 59.0
Aa31LG1G17980 Aethionema arabicum HOM05D005286 ORTHO05D006348 7.2e-73 278.1 240 59.6
Nn1g08960 Nelumbo nucifera HOM05D005286 ORTHO05D006348 7.2e-73 278.1 269 57.2
Sp2g26980 Schrenkiella parvula HOM05D005286 ORTHO05D006348 7.2e-73 278.1 269 54.3
arahy.Tifrunner.gnm1.ann1.ZN9YLD Arachis hypogaea HOM05D005286 ORTHO05D006348 9.4e-73 277.7 253 58.9
Psat5g059680 Pisum sativum HOM05D005286 ORTHO05D006348 2.1e-72 276.6 274 56.6
C03p62500 Brassica napus HOM05D005286 ORTHO05D006348 8.0e-72 274.6 240 60.0
BolC3t18507H Brassica oleracea HOM05D005286 ORTHO05D006348 8.0e-72 274.6 240 60.0
CARHR277830 Cardamine hirsuta HOM05D005286 ORTHO05D006348 8.0e-72 274.6 265 56.2
Potri.007G101700 Populus trichocarpa HOM05D005286 ORTHO05D006348 1.4e-71 273.9 239 60.3
Glyma.06G155750 Glycine max HOM05D005286 ORTHO05D006348 2.3e-71 273.1 248 57.7
Sed0025698 Sechium edule HOM05D005286 ORTHO05D006348 2.3e-71 273.1 243 60.5
CAN.G1104.7 Capsicum annuum HOM05D005286 ORTHO05D006348 4.0e-71 272.3 240 56.7
Hund07236 Selenicereus undatus HOM05D005286 ORTHO05D006348 4.0e-71 272.3 263 57.4
Hma1.2p1_3117F.1_g332810 Hydrangea macrophylla HOM05D005286 ORTHO05D006348 6.8e-71 271.6 262 57.6
BcaC01g02644 Brassica carinata HOM05D005286 ORTHO05D006348 8.8e-71 271.2 240 59.6
Peaxi162Scf00151g00811 Petunia axillaris HOM05D005286 ORTHO05D006348 8.8e-71 271.2 286 52.4
PSO170G0528 Papaver somniferum HOM05D005286 ORTHO05D006348 1.2e-70 270.8 268 54.1
MELO3C008897.2 Cucumis melo HOM05D005286 ORTHO05D006348 5.7e-70 268.5 266 56.8
TPR.G33580 Trifolium pratense HOM05D005286 ORTHO05D006348 5.7e-70 268.5 244 59.8
vmacro18685 Vaccinium macrocarpon HOM05D005286 ORTHO05D006348 5.7e-70 268.5 238 60.1
Ah.06g191030 Amaranthus hybridus HOM05D005286 ORTHO05D006348 1.7e-69 266.9 243 58.8
Hund21799 Selenicereus undatus HOM05D005286 ORTHO05D006348 2.8e-69 266.2 239 60.7
Ca_16981_v3 Cicer arietinum L. HOM05D005286 ORTHO05D006348 4.9e-69 265.4 269 56.1
ClCG04G002290 Citrullus lanatus HOM05D005286 ORTHO05D006348 4.9e-69 265.4 266 56.4
THA.LOC104818420 Tarenaya hassleriana HOM05D005286 ORTHO05D006348 1.8e-68 263.5 296 50.0
Lalb_Chr23g0272691 Lupinus albus HOM05D005286 ORTHO05D006348 2.4e-68 263.1 283 52.7
CsaV3_4G030380 Cucumis sativus L. HOM05D005286 ORTHO05D006348 2.0e-67 260.0 266 56.0
Medtr3g096675 Medicago truncatula HOM05D005286 ORTHO05D006348 5.9e-67 258.5 251 55.8
EL10Ac4g09623 Beta vulgaris HOM05D005286 ORTHO05D006348 1.7e-66 256.9 273 51.6
Aqoxy5G02419 Aquilegia oxysepala HOM05D005286 ORTHO05D006348 2.9e-66 256.1 267 52.4
VMungo1309G1016 Vigna mungo HOM05D005286 ORTHO05D006348 5.0e-66 255.4 248 56.9
Phvul.009G154600 Phaseolus vulgaris HOM05D005286 ORTHO05D006348 1.0e-63 247.7 248 57.3
Dinv24565 Davidia involucrata HOM05D005286 ORTHO05D006348 7.5e-62 241.5 221 56.6
CSS0038762 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 3.7e-61 239.2 214 58.9
CSS0028284 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 8.3e-61 238.0 195 63.6
ATR0138G018 Amborella trichopoda HOM05D005286 ORTHO05D006348 3.2e-60 236.1 259 56.0
HPP92_011629 Vanilla planifolia HOM05D005286 ORTHO05D006348 1.9e-57 226.9 281 48.4
CSS0007937 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 2.5e-57 226.5 225 54.2
CDE08G1426 Ceratophyllum demersum HOM05D005286 ORTHO05D006348 3.6e-56 222.6 253 48.2
Zm00001eb434510 Zea mays HOM05D005286 ORTHO05D006348 4.7e-56 222.2 267 49.4
AUR62000514 Chenopodium quinoa HOM05D005286 ORTHO05D006348 1.5e-54 217.2 195 60.5
QL10p041267 Quercus lobata HOM05D005286 ORTHO05D006348 2.6e-54 216.5 211 53.6
AUR62006858 Chenopodium quinoa HOM05D005286 ORTHO05D006348 1.1e-52 211.1 195 59.5
Pp3c3_10560 Physcomitrium patens HOM05D005286 ORTHO05D006348 6.6e-50 201.8 264 45.1
Cpa.g.sc37.6 Carica papaya HOM05D005286 ORTHO05D006348 1.5e-49 200.7 157 63.1
RcHm_v2.0_Chr6g0261231 Rosa chinensis HOM05D005286 ORTHO05D006348 1.9e-49 200.3 171 59.1
SMO119G0327 Selaginella moellendorffii HOM05D005286 ORTHO05D006348 3.6e-48 196.1 264 46.6
AagrBONN_evm.TU.Sc2ySwM_362.2029 Anthoceros agrestis HOM05D005286 ORTHO05D006348 6.2e-48 195.3 237 47.7
MBI06_g35210_MAGBIO Magnolia biondii HOM05D005286 ORTHO05D006348 8.1e-48 194.9 309 40.8
Haze_10873 Corylus avellana HOM05D005286 ORTHO05D006348 8.9e-47 191.4 149 67.8
CSS0025452 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 2.0e-46 190.3 264 47.7
Nn5g28436 Nelumbo nucifera HOM05D005286 ORTHO05D006348 1.1e-44 184.5 251 45.4
Mapoly0032s0088 Marchantia polymorpha HOM05D005286 ORTHO05D006348 6.0e-43 178.7 259 42.1
Sabra07G0083900 Salix brachista HOM05D005286 ORTHO05D006348 7.3e-41 171.8 172 53.5
Nitab4.5_0004530g0050 Nicotiana tabacum HOM05D005286 ORTHO05D006348 1.6e-35 154.1 161 54.7
SEGI_37681 Sequoiadendron giganteum HOM05D005286 ORTHO05D006348 3.8e-29 132.9 141 51.8
CSS0025385 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 6.0e-27 125.6 229 40.2
Nitab4.5_0008592g0010 Nicotiana tabacum HOM05D005286 ORTHO05D006348 5.1e-26 122.5 121 55.4
Os04g0692800 Oryza sativa ssp. japonica HOM05D005286 ORTHO05D006348 9.6e-25 118.2 143 46.9
Nitab4.5_0008217g0010 Nicotiana tabacum HOM05D005286 ORTHO05D006348 2.9e-21 106.7 102 57.8
Cfa022134 Carpinus fangiana HOM05D005286 ORTHO05D006348 2.5e-17 93.6 234 32.1
Oeu039336.1 Olea europaea HOM05D001574 ORTHO05D006348 4.0e-15 86.3 55 69.1
CBR_g8546 Chara braunii HOM05D005286 ORTHO05D006348 3.4e-14 83.2 90 48.9
PRCOL_00003919 Prasinoderma coloniale HOM05D005286 ORTHO05D006348 8.4e-13 78.6 235 34.0
CBR_g8549 Chara braunii HOM05D005286 ORTHO05D006348 1.9e-12 77.4 155 38.1
Hma1.2p1_0310F.1_g121040 Hydrangea macrophylla HOM05D005286 ORTHO05D006348 3.5e-11 73.2 61 55.7
DCAR_000205 Daucus carota HOM05D005286 ORTHO05D006348 1.1e-09 68.2 45 80.0
Nitab4.5_0002142g0070 Nicotiana tabacum HOM05D005286 ORTHO05D006348 9.6e-09 65.1 63 52.4
Peaxi162Scf00151g00815 Petunia axillaris HOM05D005286 ORTHO05D006348 2.1e-08 63.9 76 46.1
Oeu039334.1 Olea europaea HOM05D005286 ORTHO05D006348 2.8e-08 63.5 39 82.1
Dinv24561 Davidia involucrata HOM05D005286 ORTHO05D006348 4.8e-08 62.8 40 82.5
Dinv15529 Davidia involucrata HOM05D005286 ORTHO05D006348 1.1e-07 61.6 41 78.0
Nitab4.5_0005379g0060 Nicotiana tabacum HOM05D005286 ORTHO05D006348 2.4e-07 60.5 109 39.4
QL10p041264 Quercus lobata HOM05D005286 ORTHO05D006348 2.4e-07 60.5 39 76.9
Cpa.g.sc37.7 Carica papaya HOM05D005286 ORTHO05D006348 3.1e-07 60.1 39 82.1
SEGI_22884 Sequoiadendron giganteum HOM05D005286 ORTHO05D006348 5.3e-07 59.3 36 83.3
SEGI_35897 Sequoiadendron giganteum HOM05D005286 ORTHO05D006348 5.3e-07 59.3 36 83.3


User provided reference genes

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