Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g7861 Utricularia gibba HOM05D004744 ORTHO05D005655 9.8e-43 176.4 90 100.0
unitig_60.g25872 Utricularia gibba HOM05D004744 ORTHO05D005655 9.5e-22 106.7 59 93.2
vmacro11210 Vaccinium macrocarpon HOM05D004744 ORTHO05D005655 1.6e-13 79.3 73 60.3
vmacro11211 Vaccinium macrocarpon HOM05D004744 ORTHO05D005655 1.6e-13 79.3 73 60.3
Nitab4.5_0002992g0040 Nicotiana tabacum HOM05D004744 ORTHO05D005655 6.2e-13 77.4 73 60.3
Nitab4.5_0005958g0020 Nicotiana tabacum HOM05D004744 ORTHO05D005655 6.2e-13 77.4 73 60.3
Sc20g0001320 Simmondsia chinensis HOM05D004744 ORTHO05D005655 8.1e-13 77.0 73 58.9
Migut.A00009 Erythranthe guttata HOM05D004744 ORTHO05D005655 1.4e-12 76.3 73 56.2
AUR62012029 Chenopodium quinoa HOM05D004744 ORTHO05D005655 1.8e-12 75.9 73 56.2
MSTRG.11596 Avicennia marina HOM05D004744 ORTHO05D005655 3.1e-12 75.1 79 53.2
CSS0007985 Camellia sinensis var. sinensis HOM05D004744 ORTHO05D005655 3.1e-12 75.1 72 56.9
Cfa013106 Carpinus fangiana HOM05D004744 ORTHO05D005655 4.0e-12 74.7 74 55.4
Dinv18156 Davidia involucrata HOM05D004744 ORTHO05D005655 5.3e-12 74.3 73 54.8
AUR62015365 Chenopodium quinoa HOM05D004744 ORTHO05D005655 6.9e-12 73.9 73 54.8
Sopen08g011940 Solanum pennellii HOM05D004744 ORTHO05D005655 6.9e-12 73.9 73 56.2
CiPaw.08G008500 Carya illinoinensis HOM05D004744 ORTHO05D005655 9.0e-12 73.6 74 55.4
COL.COLO4_18910 Corchorus olitorius HOM05D004744 ORTHO05D005655 1.2e-11 73.2 72 52.8
Thecc.09G019800 Theobroma cacao HOM05D004744 ORTHO05D005655 1.2e-11 73.2 70 54.3
Lj1g0024423 Lotus japonicus HOM05D004744 ORTHO05D005655 1.5e-11 72.8 74 50.0
CAN.G326.4 Capsicum annuum HOM05D004744 ORTHO05D005655 3.4e-11 71.6 73 53.4
Eucgr.C01702 Eucalyptus grandis HOM05D004744 ORTHO05D005655 3.4e-11 71.6 80 50.0
Glyma.02G001200 Glycine max HOM05D004744 ORTHO05D005655 3.4e-11 71.6 74 51.4
Glyma.02G173300 Glycine max HOM05D004744 ORTHO05D005655 3.4e-11 71.6 74 51.4
Lj1g0018058 Lotus japonicus HOM05D004744 ORTHO05D005655 3.4e-11 71.6 74 48.6
Prupe.1G485900 Prunus persica HOM05D004744 ORTHO05D005655 3.4e-11 71.6 74 51.4
SGA_v2.0_scaffold64G21986 Striga asiatica HOM05D004744 ORTHO05D005655 3.4e-11 71.6 96 43.8
QL02p020429 Quercus lobata HOM05D004744 ORTHO05D005655 4.4e-11 71.2 74 52.7
Atru.chr7.2497 Acer truncatum HOM05D004744 ORTHO05D005655 5.8e-11 70.9 74 54.1
HanXRQChr01g0030631 Helianthus annuus HOM05D004744 ORTHO05D005655 5.8e-11 70.9 74 51.4
Phvul.007G279700 Phaseolus vulgaris HOM05D004744 ORTHO05D005655 5.8e-11 70.9 74 51.4
Cc08_g00230 Coffea canephora HOM05D004744 ORTHO05D005655 7.6e-11 70.5 72 56.9
PGR142G3966 Punica granatum HOM05D004744 ORTHO05D005655 7.6e-11 70.5 73 49.3
Actinidia13213 Actinidia chinensis HOM05D004744 ORTHO05D005655 9.9e-11 70.1 73 53.4
ECA248G1191 Erigeron canadensis HOM05D004744 ORTHO05D005655 9.9e-11 70.1 89 44.9
Lj8C731T12 Lonicera japonica HOM05D004744 ORTHO05D005655 9.9e-11 70.1 73 52.1
FAN24G2392 Fragaria x ananassa HOM05D004744 ORTHO05D005655 1.3e-10 69.7 74 50.0
Psat5g030800 Pisum sativum HOM05D004744 ORTHO05D005655 1.3e-10 69.7 73 50.7
VMungo0720G0351 Vigna mungo HOM05D004744 ORTHO05D005655 1.3e-10 69.7 74 50.0
Ca_15759_v3 Cicer arietinum L. HOM05D004744 ORTHO05D005655 1.7e-10 69.3 74 51.4
CAN.G435.2 Capsicum annuum HOM05D004744 ORTHO05D005655 2.2e-10 68.9 73 56.2
Rhsim02G0205700 Rhododendron simsii HOM05D004744 ORTHO05D005655 2.2e-10 68.9 72 54.2
arahy.Tifrunner.gnm1.ann1.8I84Z2 Arachis hypogaea HOM05D004744 ORTHO05D005655 2.9e-10 68.6 74 50.0
arahy.Tifrunner.gnm1.ann1.LGG0U4 Arachis hypogaea HOM05D004744 ORTHO05D005655 2.9e-10 68.6 74 50.0
Eucgr.C01625 Eucalyptus grandis HOM05D004744 ORTHO05D005655 2.9e-10 68.6 80 47.5
Gohir.A06G099700 Gossypium hirsutum HOM05D004744 ORTHO05D005655 2.9e-10 68.6 73 49.3
Oeu033353.1 Olea europaea HOM05D004744 ORTHO05D005655 2.9e-10 68.6 73 52.1
Cpa.g.sc187.24 Carica papaya HOM05D004744 ORTHO05D005655 3.8e-10 68.2 74 48.6
Lsat_1_v5_gn_1_43821 Lactuca sativa HOM05D004744 ORTHO05D005655 3.8e-10 68.2 89 43.8
Medtr3g106410 Medicago truncatula HOM05D004744 ORTHO05D005655 3.8e-10 68.2 74 50.0
TAR625G1411 Trochodendron aralioides HOM05D004744 ORTHO05D005655 3.8e-10 68.2 73 52.1
GSVIVG01035922001 Vitis vinifera HOM05D004744 ORTHO05D005655 3.8e-10 68.2 75 48.0
FvH4_2g28330 Fragaria vesca HOM05D004744 ORTHO05D005655 4.9e-10 67.8 74 48.6
Manes.03G012200 Manihot esculenta HOM05D004744 ORTHO05D005655 4.9e-10 67.8 73 49.3
TPR.G21279 Trifolium pratense HOM05D004744 ORTHO05D005655 4.9e-10 67.8 82 45.1
Gohir.D06G101900 Gossypium hirsutum HOM05D004744 ORTHO05D005655 6.4e-10 67.4 72 48.6
Gorai.010G116900 Gossypium raimondii HOM05D004744 ORTHO05D005655 6.4e-10 67.4 72 48.6
Sabra18G0025200 Salix brachista HOM05D004744 ORTHO05D005655 6.4e-10 67.4 73 50.7
Potri.018G022800 Populus trichocarpa HOM05D004744 ORTHO05D005655 8.4e-10 67.0 73 50.7
Nn8g39704 Nelumbo nucifera HOM05D004744 ORTHO05D005655 1.1e-09 66.6 72 51.4
FAN20G1207 Fragaria x ananassa HOM05D004744 ORTHO05D005655 1.4e-09 66.2 73 49.3
TWI32G0623 Tripterygium wilfordii HOM05D004744 ORTHO05D005655 1.4e-09 66.2 73 49.3
CANSAT01G0649 Cannabis sativa HOM05D004744 ORTHO05D005655 2.4e-09 65.5 74 47.3
FAN27G1080 Fragaria x ananassa HOM05D004744 ORTHO05D005655 2.4e-09 65.5 73 47.9
RcHm_v2.0_Chr6g0297241 Rosa chinensis HOM05D004744 ORTHO05D005655 2.4e-09 65.5 74 48.6
vmacro12150 Vaccinium macrocarpon HOM05D000172 ORTHO05D000781 2.4e-09 65.5 96 44.8
Lalb_Chr08g0244261 Lupinus albus HOM05D004744 ORTHO05D005655 5.4e-09 64.3 75 46.7
AL7G19840 Arabidopsis lyrata HOM05D004744 ORTHO05D005655 7.1e-09 63.9 70 45.7
PSO063G6514 Papaver somniferum HOM05D004744 ORTHO05D005655 7.1e-09 63.9 72 47.2
AT4G32050 Arabidopsis thaliana HOM05D004744 ORTHO05D005655 1.2e-08 63.2 70 45.7
BcaC09g51994 Brassica carinata HOM05D004744 ORTHO05D005655 1.6e-08 62.8 70 47.1
C01p06880 Brassica napus HOM05D004744 ORTHO05D005655 1.6e-08 62.8 70 47.1
BolC1t00685H Brassica oleracea HOM05D004744 ORTHO05D005655 1.6e-08 62.8 70 47.1
A01p06240 Brassica napus HOM05D004744 ORTHO05D005655 2.1e-08 62.4 70 45.7
BraA01t00591Z Brassica rapa HOM05D004744 ORTHO05D005655 2.1e-08 62.4 70 45.7
Ciclev10007726m.g Citrus clementina HOM05D004744 ORTHO05D005655 2.1e-08 62.4 90 45.6
MD15G1130500 Malus domestica HOM05D004744 ORTHO05D005655 2.7e-08 62.0 74 47.3
DCAR_000582 Daucus carota HOM05D004744 ORTHO05D005655 3.5e-08 61.6 73 47.9
unitig_0.g2772 Utricularia gibba HOM05D004744 ORTHO05D005655 3.5e-08 61.6 35 94.3
THA.LOC104805576 Tarenaya hassleriana HOM05D004744 ORTHO05D005655 4.6e-08 61.2 70 45.7
BcaNung03134 Brassica carinata HOM05D004744 ORTHO05D005655 6.0e-08 60.8 70 45.7
Os02g0798700 Oryza sativa ssp. japonica HOM05D004744 ORTHO05D005655 7.8e-08 60.5 79 41.8
RcHm_v2.0_Chr2g0139901 Rosa chinensis HOM05D004744 ORTHO05D005655 7.8e-08 60.5 73 43.8
Carub.0007s0850 Capsella rubella HOM05D004744 ORTHO05D005655 1.7e-07 59.3 70 44.3
Aa31LG2G18030 Aethionema arabicum HOM05D004744 ORTHO05D005655 2.3e-07 58.9 70 42.9
Haze_21464 Corylus avellana HOM05D004744 ORTHO05D005655 3.0e-07 58.5 93 39.8
Thhalv10024640m.g Eutrema salsugineum HOM05D004744 ORTHO05D005655 3.0e-07 58.5 70 44.3
Zm00001eb257970 Zea mays HOM05D004744 ORTHO05D005655 3.9e-07 58.2 75 45.3
Aqoxy7G03541 Aquilegia oxysepala HOM05D004744 ORTHO05D005655 5.1e-07 57.8 72 44.4
ATR0767G197 Amborella trichopoda HOM05D004744 ORTHO05D005655 6.6e-07 57.4 72 44.4
CARHR239950 Cardamine hirsuta HOM05D004744 ORTHO05D005655 6.6e-07 57.4 70 44.3
EL10Ac3g06914 Beta vulgaris HOM05D004744 ORTHO05D005655 8.7e-07 57.0 73 45.2
MELO3C016990.2 Cucumis melo HOM05D004744 ORTHO05D005655 8.7e-07 57.0 74 44.6
CDE05G1537 Ceratophyllum demersum HOM05D004744 ORTHO05D005655 1.5e-06 56.2 72 47.2
BcaC06g30946 Brassica carinata HOM05D004744 ORTHO05D005655 3.3e-06 55.1 70 41.4
CsaV3_4G036900 Cucumis sativus L. HOM05D004744 ORTHO05D005655 3.3e-06 55.1 74 43.2
Sed0024238 Sechium edule HOM05D004744 ORTHO05D005655 4.3e-06 54.7 74 41.9


User provided reference genes

Program Settings