Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g7679 Utricularia gibba HOM05D003427 ORTHO05D003927 1.2e-155 553.1 279 100.0
SGA_v2.0_scaffold24G10480 Striga asiatica HOM05D003427 ORTHO05D003927 5.2e-50 202.2 277 45.1
SalBow7G2208 Salvia bowleyana HOM05D003427 ORTHO05D003927 7.0e-47 191.8 308 40.3
MSTRG.25396 Avicennia marina HOM05D003427 ORTHO05D003927 9.1e-47 191.4 233 49.4
SalBow7G0329 Salvia bowleyana HOM05D003427 ORTHO05D003927 1.2e-46 191.0 308 40.6
MSTRG.1469 Avicennia marina HOM05D003427 ORTHO05D003927 2.7e-46 189.9 276 42.4
SGA_v2.0_scaffold52G18992 Striga asiatica HOM05D003427 ORTHO05D003927 7.2e-44 181.8 258 45.0
Cc06_g13570 Coffea canephora HOM05D003427 ORTHO05D003927 2.8e-43 179.9 212 49.1
Migut.C01159 Erythranthe guttata HOM05D003427 ORTHO05D003927 1.4e-42 177.6 277 41.2
PGSC0003DMG400012073 Solanum tuberosum HOM05D003427 ORTHO05D003927 6.8e-42 175.3 270 41.9
MELO3C003029.2 Cucumis melo HOM05D003427 ORTHO05D003927 1.2e-41 174.5 212 48.6
CAN.G134.189 Capsicum annuum HOM05D003427 ORTHO05D003927 1.5e-41 174.1 245 45.3
EL10Ac7g18243 Beta vulgaris HOM05D003427 ORTHO05D003927 2.0e-41 173.7 226 46.5
EL10Ac1g00015 Beta vulgaris HOM05D003427 ORTHO05D003927 3.4e-41 172.9 262 43.5
Potri.005G174600 Populus trichocarpa HOM05D003427 ORTHO05D003927 3.4e-41 172.9 256 42.6
Sopen11g008180 Solanum pennellii HOM05D003427 ORTHO05D003927 3.4e-41 172.9 253 42.3
TPR.G19881 Trifolium pratense HOM05D003427 ORTHO05D003927 3.4e-41 172.9 265 39.6
Solyc11g013120.2 Solanum lycopersicum HOM05D003427 ORTHO05D003927 5.7e-41 172.2 253 41.9
CANSAT56G1611 Cannabis sativa HOM05D003427 ORTHO05D003927 2.2e-40 170.2 232 44.4
Sc01g0001400 Simmondsia chinensis HOM05D003427 ORTHO05D003927 4.9e-40 169.1 235 43.8
Potri.002G086800 Populus trichocarpa HOM05D003427 ORTHO05D003927 6.3e-40 168.7 249 43.0
CANSAT56G1577 Cannabis sativa HOM05D003427 ORTHO05D003927 8.3e-40 168.3 266 40.2
Oeu050892.2 Olea europaea HOM05D003427 ORTHO05D003927 8.3e-40 168.3 307 39.7
CsaV3_5G023150 Cucumis sativus L. HOM05D003427 ORTHO05D003927 1.1e-39 167.9 222 47.7
CSS0043512 Camellia sinensis var. sinensis HOM05D003427 ORTHO05D003927 2.4e-39 166.8 214 45.3
CSS0048113 Camellia sinensis var. sinensis HOM05D003427 ORTHO05D003927 2.4e-39 166.8 214 45.3
Prupe.1G502900 Prunus persica HOM05D003427 ORTHO05D003927 2.4e-39 166.8 232 44.8
TWI12G1192 Tripterygium wilfordii HOM05D003427 ORTHO05D003927 2.4e-39 166.8 283 40.3
Rhsim06G0106600 Rhododendron simsii HOM05D003427 ORTHO05D003927 3.1e-39 166.4 232 43.5
Atru.chr13.1391 Acer truncatum HOM05D003427 ORTHO05D003927 4.1e-39 166.0 240 43.8
CSS0044236 Camellia sinensis var. sinensis HOM05D003427 ORTHO05D003927 4.1e-39 166.0 213 45.5
ClCG03G009520 Citrullus lanatus HOM05D003427 ORTHO05D003927 4.1e-39 166.0 214 47.7
Medtr3g072830 Medicago truncatula HOM05D003427 ORTHO05D003927 4.1e-39 166.0 237 42.2
AUR62036406 Chenopodium quinoa HOM05D003427 ORTHO05D003927 5.4e-39 165.6 242 43.0
Glyma.06G110500 Glycine max HOM05D003427 ORTHO05D003927 5.4e-39 165.6 214 42.5
Lj1g0010808 Lotus japonicus HOM05D003427 ORTHO05D003927 5.4e-39 165.6 268 38.4
Psat5g133440 Pisum sativum HOM05D003427 ORTHO05D003927 7.0e-39 165.2 219 44.7
unitig_32.g11457 Utricularia gibba HOM05D003427 ORTHO05D003927 7.0e-39 165.2 122 65.6
arahy.Tifrunner.gnm1.ann1.X2WTDQ Arachis hypogaea HOM05D003427 ORTHO05D003927 1.2e-38 164.5 233 40.3
CiPaw.05G226400 Carya illinoinensis HOM05D003427 ORTHO05D003927 1.2e-38 164.5 286 38.1
Ciclev10001037m.g Citrus clementina HOM05D003427 ORTHO05D003927 1.2e-38 164.5 237 43.0
Duzib116G0521 Durio zibethinus HOM05D003427 ORTHO05D003927 1.2e-38 164.5 224 44.6
COL.COLO4_38335 Corchorus olitorius HOM05D003427 ORTHO05D003927 2.0e-38 163.7 287 38.7
Medtr3g072840 Medicago truncatula HOM05D003427 ORTHO05D003927 2.7e-38 163.3 217 44.7
vmacro20081 Vaccinium macrocarpon HOM05D003427 ORTHO05D003927 2.7e-38 163.3 242 41.3
Gohir.A06G042200 Gossypium hirsutum HOM05D003427 ORTHO05D003927 3.5e-38 162.9 224 45.5
Gohir.D06G043200 Gossypium hirsutum HOM05D003427 ORTHO05D003927 3.5e-38 162.9 238 45.0
Dinv27352 Davidia involucrata HOM05D003427 ORTHO05D003927 4.5e-38 162.5 262 41.2
Glyma.04G252000 Glycine max HOM05D003427 ORTHO05D003927 4.5e-38 162.5 238 39.5
Gorai.010G048400 Gossypium raimondii HOM05D003427 ORTHO05D003927 4.5e-38 162.5 238 44.5
FvH4_2g13600 Fragaria vesca HOM05D003427 ORTHO05D003927 5.9e-38 162.2 240 40.8
QL07p045468 Quercus lobata HOM05D003427 ORTHO05D003927 5.9e-38 162.2 252 39.3
TWI56G0570 Tripterygium wilfordii HOM05D003427 ORTHO05D003927 5.9e-38 162.2 263 41.8
VMungo1215G1715 Vigna mungo HOM05D003427 ORTHO05D003927 5.9e-38 162.2 299 37.8
arahy.Tifrunner.gnm1.ann1.81342Q Arachis hypogaea HOM05D003427 ORTHO05D003927 7.8e-38 161.8 234 40.2
Ca_15210_v3 Cicer arietinum L. HOM05D003427 ORTHO05D003927 7.8e-38 161.8 272 37.5
A04p31750 Brassica napus HOM05D003427 ORTHO05D003927 1.0e-37 161.4 214 45.8
Cpa.g.sc36.19 Carica papaya HOM05D003427 ORTHO05D003927 1.0e-37 161.4 242 43.4
MD15G1354500 Malus domestica HOM05D003427 ORTHO05D003927 1.0e-37 161.4 216 44.4
QL04p060321 Quercus lobata HOM05D003427 ORTHO05D003927 1.0e-37 161.4 243 41.6
Nitab4.5_0006276g0030 Nicotiana tabacum HOM05D003427 ORTHO05D003927 1.3e-37 161.0 268 39.9
Phvul.003G010800 Phaseolus vulgaris HOM05D003427 ORTHO05D003927 1.3e-37 161.0 256 41.0
Hund16838 Selenicereus undatus HOM05D003427 ORTHO05D003927 1.3e-37 161.0 236 43.2
Actinidia23060 Actinidia chinensis HOM05D003427 ORTHO05D003927 1.7e-37 160.6 234 43.6
Eucgr.F04372 Eucalyptus grandis HOM05D003427 ORTHO05D003927 1.7e-37 160.6 232 43.5
BolC4t28415H Brassica oleracea HOM05D003427 ORTHO05D003927 2.3e-37 160.2 214 45.3
FvH4_2g26430 Fragaria vesca HOM05D003427 ORTHO05D003927 2.3e-37 160.2 232 44.0
FAN24G2254 Fragaria x ananassa HOM05D003427 ORTHO05D003927 2.3e-37 160.2 232 44.0
C04p69170 Brassica napus HOM05D003427 ORTHO05D003927 2.9e-37 159.8 238 42.9
BraA04t18633Z Brassica rapa HOM05D003427 ORTHO05D003927 3.8e-37 159.5 238 42.4
FAN15G0544 Fragaria x ananassa HOM05D003427 ORTHO05D003927 3.8e-37 159.5 211 44.1
Medtr3g007470 Medicago truncatula HOM05D003427 ORTHO05D003927 3.8e-37 159.5 228 43.9
Aqoxy1G02472 Aquilegia oxysepala HOM05D003427 ORTHO05D003927 5.0e-37 159.1 214 46.7
BcaB06g29198 Brassica carinata HOM05D003427 ORTHO05D003927 6.6e-37 158.7 279 38.4
Lj3g0027376 Lotus japonicus HOM05D003427 ORTHO05D003927 6.6e-37 158.7 223 45.3
Hund27042 Selenicereus undatus HOM05D003427 ORTHO05D003927 6.6e-37 158.7 254 41.3
Thhalv10016628m.g Eutrema salsugineum HOM05D003427 ORTHO05D003927 1.1e-36 157.9 212 46.2
Hund16834 Selenicereus undatus HOM05D003427 ORTHO05D003927 1.1e-36 157.9 251 40.6
GSVIVG01008915001 Vitis vinifera HOM05D003427 ORTHO05D003927 1.1e-36 157.9 234 43.2
CARHR136800 Cardamine hirsuta HOM05D003427 ORTHO05D003927 1.5e-36 157.5 211 45.5
Sp4g23950 Schrenkiella parvula HOM05D003427 ORTHO05D003927 1.9e-36 157.1 210 45.2
TPR.G39483 Trifolium pratense HOM05D003427 ORTHO05D003927 1.9e-36 157.1 257 40.1
FAN24G2318 Fragaria x ananassa HOM05D003427 ORTHO05D003927 2.5e-36 156.8 212 44.3
HanXRQChr17g0537311 Helianthus annuus HOM05D003427 ORTHO05D003927 2.5e-36 156.8 229 42.4
RcHm_v2.0_Chr6g0295111 Rosa chinensis HOM05D003427 ORTHO05D003927 2.5e-36 156.8 202 47.0
TAR381G1219 Trochodendron aralioides HOM05D003427 ORTHO05D003927 2.5e-36 156.8 227 43.6
VMungo1309G2531 Vigna mungo HOM05D003427 ORTHO05D003927 3.3e-36 156.4 218 42.7
FAN15G0165 Fragaria x ananassa HOM05D003427 ORTHO05D003927 4.3e-36 156.0 232 42.2
THA.LOC104800187 Tarenaya hassleriana HOM05D003427 ORTHO05D003927 4.3e-36 156.0 227 44.9
Phvul.009G122400 Phaseolus vulgaris HOM05D003427 ORTHO05D003927 5.6e-36 155.6 233 39.9
Thecc.08G120400 Theobroma cacao HOM05D003427 ORTHO05D003927 5.6e-36 155.6 214 44.4
RcHm_v2.0_Chr6g0275211 Rosa chinensis HOM05D003427 ORTHO05D003927 7.3e-36 155.2 231 41.6
Sed0011022 Sechium edule HOM05D003427 ORTHO05D003927 7.3e-36 155.2 215 45.6
Duzib093G1044 Durio zibethinus HOM05D003427 ORTHO05D003927 1.2e-35 154.5 224 44.2
TWI74G0994 Tripterygium wilfordii HOM05D003427 ORTHO05D003927 1.2e-35 154.5 236 41.5
AT2G41705 Arabidopsis thaliana HOM05D003427 ORTHO05D003927 1.6e-35 154.1 211 43.6
Hma1.2p1_0009F.1_g006270 Hydrangea macrophylla HOM05D003427 ORTHO05D003927 1.6e-35 154.1 204 45.1
AL4G40010 Arabidopsis lyrata HOM05D003427 ORTHO05D003927 2.1e-35 153.7 211 43.6
Lsat_1_v5_gn_3_20261 Lactuca sativa HOM05D003427 ORTHO05D003927 2.8e-35 153.3 209 45.9
Carub.0004s2398 Capsella rubella HOM05D003427 ORTHO05D003927 8.0e-35 151.8 211 42.7
Lalb_Chr11g0065761 Lupinus albus HOM05D003427 ORTHO05D003927 1.8e-34 150.6 218 41.7
BcaNung06817 Brassica carinata HOM05D003427 ORTHO05D003927 2.3e-34 150.2 230 41.7
Aa31LG1G23720 Aethionema arabicum HOM05D003427 ORTHO05D003927 3.0e-34 149.8 203 45.3
MSTRG.1470 Avicennia marina HOM05D003427 ORTHO05D003927 4.0e-34 149.4 154 50.6
Psat5g229600 Pisum sativum HOM05D003427 ORTHO05D003927 8.9e-34 148.3 208 44.2
BolC4t21927H Brassica oleracea HOM05D003427 ORTHO05D003927 2.6e-33 146.7 214 42.5
AUR62036452 Chenopodium quinoa HOM05D003427 ORTHO05D003927 2.6e-33 146.7 246 40.7
AUR62023631 Chenopodium quinoa HOM05D003427 ORTHO05D003927 3.4e-33 146.4 246 41.1
Zm00001eb390680 Zea mays HOM05D003427 ORTHO05D003927 3.4e-33 146.4 215 39.1
A05p02420 Brassica napus HOM05D003427 ORTHO05D003927 4.4e-33 146.0 214 42.5
BraA05t19236Z Brassica rapa HOM05D003427 ORTHO05D003927 4.4e-33 146.0 214 42.5
ECA233G4311 Erigeron canadensis HOM05D001171 ORTHO05D006126 5.7e-33 145.6 288 37.5
Haze_00493 Corylus avellana HOM05D003427 ORTHO05D003927 1.3e-32 144.4 269 37.2
Peaxi162Scf00402g00076 Petunia axillaris HOM05D003427 ORTHO05D003927 1.3e-32 144.4 297 35.7
Os10g0567000 Oryza sativa ssp. japonica HOM05D003427 ORTHO05D003927 1.7e-32 144.1 231 38.1
ECA246G0604 Erigeron canadensis HOM05D003427 ORTHO05D003927 3.7e-32 142.9 209 43.1
Ah.05g172200 Amaranthus hybridus HOM05D003427 ORTHO05D003927 3.2e-31 139.8 161 50.9
MD05G1028200 Malus domestica HOM05D003427 ORTHO05D003927 3.2e-31 139.8 247 38.1
vmacro05626 Vaccinium macrocarpon HOM05D003427 ORTHO05D003927 4.1e-31 139.4 186 47.8
PSO384G4155 Papaver somniferum HOM05D003427 ORTHO05D003927 7.0e-31 138.7 246 38.6
Nitab4.5_0005357g0010 Nicotiana tabacum HOM05D003427 ORTHO05D003927 1.2e-30 137.9 140 51.4
Sabra05G0131500 Salix brachista HOM05D003427 ORTHO05D003927 2.0e-30 137.1 155 50.3
Ca_14080_v3 Cicer arietinum L. HOM05D003427 ORTHO05D003927 2.7e-30 136.7 209 41.6
AUR62004716 Chenopodium quinoa HOM05D003427 ORTHO05D003927 3.5e-30 136.3 248 39.9
Atru.chr13.1349 Acer truncatum HOM05D003427 ORTHO05D003927 4.6e-30 136.0 137 54.0
Manes.18G074712 Manihot esculenta HOM05D003427 ORTHO05D003927 4.6e-30 136.0 292 34.6
MD15G1354300 Malus domestica HOM05D003427 ORTHO05D003927 7.8e-30 135.2 137 55.5
Sabra05G0131700 Salix brachista HOM05D003427 ORTHO05D003927 1.0e-29 134.8 155 49.7
BcaC02g12787 Brassica carinata HOM05D003427 ORTHO05D003927 1.7e-29 134.0 242 38.0
C04p02870 Brassica napus HOM05D003427 ORTHO05D003927 1.7e-29 134.0 242 38.0
BcaB06g29200 Brassica carinata HOM05D003427 ORTHO05D003927 6.6e-29 132.1 123 54.5
Cfa015981 Carpinus fangiana HOM05D003427 ORTHO05D003927 1.1e-28 131.3 293 33.8
Lalb_Chr23g0270941 Lupinus albus HOM05D003427 ORTHO05D003927 1.5e-28 131.0 157 47.8
SEGI_02547 Sequoiadendron giganteum HOM05D003427 ORTHO05D003927 3.3e-28 129.8 205 36.1
SEGI_27083 Sequoiadendron giganteum HOM05D003427 ORTHO05D003927 3.3e-28 129.8 205 36.1
Lj4A597T12 Lonicera japonica HOM05D003427 ORTHO05D003927 4.3e-28 129.4 157 47.1
CDE01G0736 Ceratophyllum demersum HOM05D003427 ORTHO05D003927 5.6e-28 129.0 139 53.2
SEGI_33607 Sequoiadendron giganteum HOM05D003427 ORTHO05D003927 7.3e-28 128.6 205 36.6
AagrBONN_evm.TU.Sc2ySwM_117.415 Anthoceros agrestis HOM05D003427 ORTHO05D003927 1.2e-27 127.9 188 37.2
RhsimUnG0120600 Rhododendron simsii HOM05D003427 ORTHO05D003927 1.6e-27 127.5 158 44.3
Rhsim10G0043500 Rhododendron simsii HOM05D003427 ORTHO05D003927 6.2e-27 125.6 163 46.0
Nn5g28144 Nelumbo nucifera HOM05D003427 ORTHO05D003927 1.8e-26 124.0 158 46.2
SEGI_06352 Sequoiadendron giganteum HOM05D003427 ORTHO05D003927 2.3e-26 123.6 222 35.1
HPP92_012116 Vanilla planifolia HOM05D003427 ORTHO05D003927 6.8e-26 122.1 216 36.1
Hma1.2p1_0009F.1_g006283 Hydrangea macrophylla HOM05D003427 ORTHO05D003927 3.4e-25 119.8 179 39.1
MD08G1121700 Malus domestica HOM05D003427 ORTHO05D003927 1.7e-24 117.5 154 44.8
Pp3c6_15270 Physcomitrium patens HOM05D003427 ORTHO05D003927 1.7e-24 117.5 255 30.6
TAR381G0480 Trochodendron aralioides HOM05D003427 ORTHO05D003927 3.2e-23 113.2 153 44.4
Ca_14032_v3 Cicer arietinum L. HOM05D003427 ORTHO05D003927 5.4e-23 112.5 156 42.3
AagrBONN_evm.TU.Sc2ySwM_344.5028 Anthoceros agrestis HOM05D003427 ORTHO05D003927 1.2e-22 111.3 120 45.8
Mapoly0005s0025 Marchantia polymorpha HOM05D003427 ORTHO05D003927 1.6e-22 110.9 137 41.6
Aqoxy1G02473 Aquilegia oxysepala HOM05D003427 ORTHO05D003927 7.8e-22 108.6 128 50.0
Hma1.2p1_0523F.1_g172050 Hydrangea macrophylla HOM05D003427 ORTHO05D003927 7.8e-22 108.6 152 41.4
Hma1.2p1_0009F.1_g006290 Hydrangea macrophylla HOM05D003427 ORTHO05D003927 1.7e-21 107.5 148 39.9
Pp3c27_680 Physcomitrium patens HOM05D003427 ORTHO05D003927 3.0e-21 106.7 225 32.9
Glyma.06G110450 Glycine max HOM05D003427 ORTHO05D003927 3.9e-21 106.3 109 51.4
Glyma.04G252050 Glycine max HOM05D003427 ORTHO05D003927 5.0e-21 105.9 155 41.3
vmacro12550 Vaccinium macrocarpon HOM05D003427 ORTHO05D003927 8.6e-21 105.1 101 54.5
Lalb_Chr23g0270911 Lupinus albus HOM05D003427 ORTHO05D003927 3.6e-19 99.8 82 58.5
MD05G1028400 Malus domestica HOM05D003427 ORTHO05D003927 3.6e-19 99.8 67 68.7
MD16G1151600 Malus domestica HOM05D003427 ORTHO05D003927 4.7e-19 99.4 107 48.6
ATR0807G044 Amborella trichopoda HOM05D003427 ORTHO05D003927 1.8e-18 97.4 195 35.9
SEGI_10482 Sequoiadendron giganteum HOM05D003427 ORTHO05D003927 1.5e-17 94.4 155 34.2
CiPaw.05G226300 Carya illinoinensis HOM05D003427 ORTHO05D003927 4.3e-12 76.3 253 29.6
CBR_g54098 Chara braunii HOM05D003427 ORTHO05D003927 7.3e-12 75.5 82 39.0
MD08G1168800 Malus domestica HOM05D003427 ORTHO05D003927 2.8e-11 73.6 160 36.2
FAN27G1027 Fragaria x ananassa HOM05D003427 ORTHO05D003927 1.8e-10 70.9 99 43.4
MD08G1168900 Malus domestica HOM05D003427 ORTHO05D003927 4.0e-10 69.7 155 33.5
MD08G1170500 Malus domestica HOM05D003427 ORTHO05D003927 2.2e-08 63.9 218 29.4
AagrBONN_evm.TU.Sc2ySwM_368.1082 Anthoceros agrestis HOM05D005116 ORTHO05D005937 6.4e-08 62.4 64 43.8
Migut.C01160 Erythranthe guttata HOM05D003427 ORTHO05D003927 5.4e-07 59.3 41 73.2


User provided reference genes

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