Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g7639 Utricularia gibba HOM05D006002 ORTHO05D007651 1.4e-217 759.2 368 100.0
Migut.M01570 Erythranthe guttata HOM05D006002 ORTHO05D007651 1.6e-131 473.4 363 63.9
MSTRG.16122 Avicennia marina HOM05D006002 ORTHO05D007651 3.0e-130 469.2 344 66.3
SGA_v2.0_scaffold7G03564 Striga asiatica HOM05D006002 ORTHO05D007651 3.9e-130 468.8 361 64.5
Sopen07g034460 Solanum pennellii HOM05D006002 ORTHO05D007651 1.2e-126 457.2 342 64.0
PGSC0003DMG400022243 Solanum tuberosum HOM05D006002 ORTHO05D007651 2.0e-126 456.4 342 63.5
Nitab4.5_0000294g0110 Nicotiana tabacum HOM05D006002 ORTHO05D007651 2.2e-125 453.0 343 62.7
Solyc07g066280.3 Solanum lycopersicum HOM05D006002 ORTHO05D007651 4.9e-125 451.8 342 62.9
Nitab4.5_0001235g0050 Nicotiana tabacum HOM05D006002 ORTHO05D007651 1.1e-124 450.7 342 62.0
CAN.G943.23 Capsicum annuum HOM05D006002 ORTHO05D007651 1.4e-124 450.3 342 62.6
Rhsim04G0006400 Rhododendron simsii HOM05D006002 ORTHO05D007651 1.6e-123 446.8 349 62.2
Cc05_g15870 Coffea canephora HOM05D006002 ORTHO05D007651 3.5e-123 445.7 368 59.5
Peaxi162Scf00232g00102 Petunia axillaris HOM05D006002 ORTHO05D007651 1.0e-122 444.1 342 61.4
Actinidia37107 Actinidia chinensis HOM05D006002 ORTHO05D007651 5.1e-122 441.8 348 62.4
Hma1.2p1_0193F.1_g084470 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 1.1e-121 440.7 332 62.3
Hma1.2p1_0193F.1_g084460 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 1.9e-121 439.9 342 61.1
MD10G1197800 Malus domestica HOM05D006002 ORTHO05D007651 1.9e-121 439.9 336 61.9
vmacro09790 Vaccinium macrocarpon HOM05D006002 ORTHO05D007651 5.7e-121 438.3 346 61.6
Manes.03G102600 Manihot esculenta HOM05D006002 ORTHO05D007651 7.4e-121 438.0 342 61.7
Potri.003G221400 Populus trichocarpa HOM05D006002 ORTHO05D007651 9.7e-121 437.6 345 61.4
CSS0008604 Camellia sinensis var. sinensis HOM05D006002 ORTHO05D007651 4.8e-120 435.3 353 61.2
COL.COLO4_25103 Corchorus olitorius HOM05D006002 ORTHO05D007651 4.8e-120 435.3 340 62.6
FAN16G0275 Fragaria x ananassa HOM05D006002 ORTHO05D007651 8.2e-120 434.5 334 61.7
FvH4_3g16091 Fragaria vesca HOM05D006002 ORTHO05D007651 1.8e-119 433.3 327 62.1
FAN11G0453 Fragaria x ananassa HOM05D006002 ORTHO05D007651 1.8e-119 433.3 327 62.4
Lsat_1_v5_gn_7_116060 Lactuca sativa HOM05D006002 ORTHO05D007651 1.8e-119 433.3 339 62.8
SalBow8G1862 Salvia bowleyana HOM05D006002 ORTHO05D007651 1.8e-119 433.3 364 60.4
TAR627G1081 Trochodendron aralioides HOM05D006002 ORTHO05D007651 1.8e-119 433.3 342 61.1
Prupe.4G144100 Prunus persica HOM05D006002 ORTHO05D007651 5.3e-119 431.8 337 60.8
RcHm_v2.0_Chr5g0027061 Rosa chinensis HOM05D006002 ORTHO05D007651 9.0e-119 431.0 365 58.1
Psat3g026200 Pisum sativum HOM05D006002 ORTHO05D007651 2.0e-118 429.9 337 61.1
Eucgr.F01438 Eucalyptus grandis HOM05D006002 ORTHO05D007651 2.6e-118 429.5 331 61.0
Glyma.08G167200 Glycine max HOM05D006002 ORTHO05D007651 5.9e-118 428.3 342 61.7
HanXRQChr11g0335201 Helianthus annuus HOM05D006002 ORTHO05D007651 5.9e-118 428.3 346 60.7
QL04p088541 Quercus lobata HOM05D006002 ORTHO05D007651 2.2e-117 426.4 345 60.3
PGR083G2675 Punica granatum HOM05D006002 ORTHO05D007651 5.0e-117 425.2 331 62.8
Nn3g20175 Nelumbo nucifera HOM05D006002 ORTHO05D007651 1.1e-116 424.1 365 57.8
Glyma.15G260100 Glycine max HOM05D006002 ORTHO05D007651 2.5e-116 422.9 343 60.9
Lj3g0018048 Lotus japonicus HOM05D006002 ORTHO05D007651 4.2e-116 422.2 345 59.7
Sabra03G0164800 Salix brachista HOM05D006002 ORTHO05D007651 5.5e-116 421.8 336 61.3
FAN25G3512 Fragaria x ananassa HOM05D006002 ORTHO05D007651 1.6e-115 420.2 327 60.2
Lj8A185G55 Lonicera japonica HOM05D006002 ORTHO05D007651 6.1e-115 418.3 325 63.1
TWI53G1943 Tripterygium wilfordii HOM05D006002 ORTHO05D007651 1.0e-114 417.5 343 59.2
arahy.Tifrunner.gnm1.ann1.0RH0I3 Arachis hypogaea HOM05D006002 ORTHO05D007651 5.1e-114 415.2 350 58.3
arahy.Tifrunner.gnm1.ann1.HWL53Q Arachis hypogaea HOM05D006002 ORTHO05D007651 6.7e-114 414.8 350 58.0
Ca_09098_v3 Cicer arietinum L. HOM05D006002 ORTHO05D007651 2.5e-113 412.9 343 58.0
Gohir.A05G076100 Gossypium hirsutum HOM05D006002 ORTHO05D007651 4.3e-113 412.1 345 58.6
Phvul.005G050900 Phaseolus vulgaris HOM05D006002 ORTHO05D007651 7.4e-113 411.4 350 59.1
Medtr7g107330 Medicago truncatula HOM05D006002 ORTHO05D007651 9.7e-113 411.0 341 57.5
VMungo1080G0998 Vigna mungo HOM05D001395 ORTHO05D002039 3.7e-112 409.1 333 59.2
Ah.04g163380 Amaranthus hybridus HOM05D006002 ORTHO05D007651 6.3e-112 408.3 333 58.6
Gorai.009G080200 Gossypium raimondii HOM05D006002 ORTHO05D007651 8.2e-112 407.9 345 58.0
Ciclev10020646m.g Citrus clementina HOM05D006002 ORTHO05D007651 1.1e-111 407.5 328 59.1
PSO675G3741 Papaver somniferum HOM05D006002 ORTHO05D007651 1.2e-110 404.1 337 58.2
Sc03g0007860 Simmondsia chinensis HOM05D006002 ORTHO05D007651 1.2e-110 404.1 358 56.1
ECA236G2913 Erigeron canadensis HOM05D006002 ORTHO05D007651 3.4e-110 402.5 335 59.4
CANSAT56G1259 Cannabis sativa HOM05D006002 ORTHO05D007651 5.9e-110 401.7 337 58.8
PSO541G1619 Papaver somniferum HOM05D006002 ORTHO05D007651 5.9e-110 401.7 337 57.0
Hund02296 Selenicereus undatus HOM05D006002 ORTHO05D007651 1.0e-109 401.0 328 59.8
THA.LOC104819332 Tarenaya hassleriana HOM05D006002 ORTHO05D007651 1.0e-109 401.0 340 58.2
Duzib168G0541 Durio zibethinus HOM05D006002 ORTHO05D007651 2.9e-109 399.4 341 58.4
ClCG11G016270 Citrullus lanatus HOM05D006002 ORTHO05D007651 3.8e-109 399.1 341 57.5
Thecc.03G324000 Theobroma cacao HOM05D006002 ORTHO05D007651 6.5e-109 398.3 376 54.3
Aqoxy1G01586 Aquilegia oxysepala HOM05D006002 ORTHO05D007651 4.2e-108 395.6 354 54.2
CsaV3_2G022200 Cucumis sativus L. HOM05D006002 ORTHO05D007651 4.2e-108 395.6 327 57.5
Eucgr.F01442 Eucalyptus grandis HOM05D006002 ORTHO05D007651 2.7e-107 392.9 314 59.9
Sed0002243 Sechium edule HOM05D006002 ORTHO05D007651 6.7e-106 388.3 327 56.3
BcaB02g09782 Brassica carinata HOM05D006002 ORTHO05D007651 1.5e-105 387.1 346 56.9
Haze_07820 Corylus avellana HOM05D006002 ORTHO05D007651 4.4e-105 385.6 309 60.8
Aa31LG1G17780 Aethionema arabicum HOM05D006002 ORTHO05D007651 3.7e-104 382.5 325 57.2
CiPaw.11G062100 Carya illinoinensis HOM05D006002 ORTHO05D007651 3.7e-104 382.5 329 58.4
MBI02_g43301_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 3.7e-104 382.5 367 51.8
Lalb_Chr25g0284701 Lupinus albus HOM05D006002 ORTHO05D007651 1.4e-103 380.6 286 63.3
BolC3t18471H Brassica oleracea HOM05D006002 ORTHO05D007651 2.4e-103 379.8 349 55.9
Gohir.D05G078800 Gossypium hirsutum HOM05D006002 ORTHO05D007651 3.1e-103 379.4 325 57.8
BcaC01g02672 Brassica carinata HOM05D006002 ORTHO05D007651 4.1e-103 379.0 348 56.0
A06p30870 Brassica napus HOM05D006002 ORTHO05D007651 4.1e-103 379.0 348 55.5
CARHR278060 Cardamine hirsuta HOM05D006002 ORTHO05D007651 5.3e-103 378.6 362 54.4
CDE02G2905 Ceratophyllum demersum HOM05D006002 ORTHO05D007651 1.2e-102 377.5 367 51.5
Thhalv10004403m.g Eutrema salsugineum HOM05D006002 ORTHO05D007651 7.7e-102 374.8 337 55.8
QL04p088993 Quercus lobata HOM05D006002 ORTHO05D007651 6.5e-101 371.7 292 61.6
BraA06t26026Z Brassica rapa HOM05D006002 ORTHO05D007651 1.9e-100 370.2 342 55.8
EL10Ac4g08518 Beta vulgaris HOM05D006002 ORTHO05D007651 3.2e-100 369.4 353 52.7
C03p62100 Brassica napus HOM05D006002 ORTHO05D007651 9.4e-100 367.9 343 56.0
AT5G64150 Arabidopsis thaliana HOM05D006002 ORTHO05D007651 1.2e-99 367.5 326 55.8
Sp2g27210 Schrenkiella parvula HOM05D006002 ORTHO05D007651 1.2e-99 367.5 326 55.5
Carub.0008s2494 Capsella rubella HOM05D006002 ORTHO05D007651 4.7e-99 365.5 335 54.6
Gohir.1Z049302 Gossypium hirsutum HOM05D006002 ORTHO05D007651 1.4e-98 364.0 345 53.9
GSVIVG01020461001 Vitis vinifera HOM05D006002 ORTHO05D007651 3.0e-98 362.8 248 68.1
AL8G41420 Arabidopsis lyrata HOM05D006002 ORTHO05D007651 1.1e-97 360.9 357 52.7
MELO3C010553.2 Cucumis melo HOM05D006002 ORTHO05D007651 3.7e-96 355.9 302 57.0
Dinv42524 Davidia involucrata HOM05D006002 ORTHO05D007651 6.3e-96 355.1 364 51.6
MBI02_g20986_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 8.5e-93 344.7 372 48.7
HPP92_001894 Vanilla planifolia HOM05D006002 ORTHO05D004222 1.2e-91 340.9 320 55.3
QL03p043202 Quercus lobata HOM05D006002 ORTHO05D007651 3.2e-84 316.2 259 60.2
ATR0165G036 Amborella trichopoda HOM05D006002 ORTHO05D007651 4.2e-84 315.8 242 59.1
Os12g0612500 Oryza sativa ssp. japonica HOM05D006002 ORTHO05D007651 3.0e-82 309.7 343 49.0
SEGI_37419 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 2.2e-80 303.5 285 50.9
SMO145G0236 Selaginella moellendorffii HOM05D006002 ORTHO05D007651 3.1e-79 299.7 334 47.0
Oeu052016.1 Olea europaea HOM05D006002 ORTHO05D007651 2.3e-74 283.5 230 63.9
Pp3c1_22930 Physcomitrium patens HOM05D006002 ORTHO05D007651 5.7e-73 278.9 254 55.1
Potri.018G000850 Populus trichocarpa HOM05D006002 ORTHO05D007651 1.1e-71 274.6 315 48.3
MD05G1214000 Malus domestica HOM05D006002 ORTHO05D007651 1.4e-71 274.2 252 54.8
AagrBONN_evm.TU.Sc2ySwM_344.4971 Anthoceros agrestis HOM05D006002 ORTHO05D007651 4.5e-70 269.2 329 46.5
Mapoly0051s0043 Marchantia polymorpha HOM05D006002 ORTHO05D007651 1.1e-68 264.6 271 49.8
Atru.chr2.1886 Acer truncatum HOM05D006002 ORTHO05D007651 4.3e-68 262.7 221 56.1
AUR62035491 Chenopodium quinoa HOM05D006002 ORTHO05D007651 3.4e-65 253.1 299 49.2
Cfa022974 Carpinus fangiana HOM05D006002 ORTHO05D007651 4.4e-65 252.7 217 59.0
AUR62041934 Chenopodium quinoa HOM05D006002 ORTHO05D007651 5.8e-65 252.3 285 49.5
CBR_g8978 Chara braunii HOM05D006002 ORTHO05D007651 6.0e-62 242.3 220 54.1
Actinidia35439 Actinidia chinensis HOM05D006002 ORTHO05D007651 7.3e-60 235.3 219 57.1
Cpa.g.sc42.79 Carica papaya HOM05D006002 ORTHO05D007651 1.6e-59 234.2 228 53.1
TPR.G32276 Trifolium pratense HOM05D006002 ORTHO05D007651 3.6e-51 206.5 347 35.2
MCO01G477 Micromonas commoda HOM05D006002 ORTHO05D007651 3.1e-50 203.4 391 34.0
TPR.G18376 Trifolium pratense HOM05D006002 ORTHO05D007651 8.9e-50 201.8 157 63.1
Potri.001G003632 Populus trichocarpa HOM05D006002 ORTHO05D007651 5.4e-47 192.6 165 58.2
Cre07.g337516 Chlamydomonas reinhardtii HOM05D006002 ORTHO05D007651 1.5e-41 174.5 311 35.0
Cpa.g.sc42.82 Carica papaya HOM05D006002 ORTHO05D007651 5.8e-41 172.6 124 60.5
QL04p062372 Quercus lobata HOM05D006002 ORTHO05D007651 5.8e-41 172.6 128 62.5
PRCOL_00003514 Prasinoderma coloniale HOM05D006002 ORTHO05D007651 7.8e-38 162.2 414 31.2
Zm00001eb031660 Zea mays HOM05D006002 ORTHO05D007651 3.0e-37 160.2 125 53.6
QL04p088694 Quercus lobata HOM05D006002 ORTHO05D007651 3.3e-36 156.8 171 49.7
MD05G1214300 Malus domestica HOM05D006002 ORTHO05D007651 4.0e-34 149.8 109 68.8
SEGI_15629 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 7.8e-30 135.6 128 48.4
BcaB04g17517 Brassica carinata HOM05D006002 ORTHO05D007651 2.6e-25 120.6 97 60.8
COL.COLO4_30126 Corchorus olitorius HOM05D006002 ORTHO05D007651 2.9e-24 117.1 85 62.4
QL04p089617 Quercus lobata HOM05D002182 ORTHO05D004671 1.5e-20 104.8 127 49.6
QL03p043192 Quercus lobata HOM05D006002 ORTHO05D007651 1.1e-15 88.6 63 66.7
QL04p089868 Quercus lobata HOM05D006002 ORTHO05D007651 1.1e-15 88.6 59 69.5
CAN.G42.13 Capsicum annuum HOM05D006002 ORTHO05D007651 1.1e-07 62.0 71 49.3
Cfa023409 Carpinus fangiana HOM05D006002 ORTHO05D126491 1.1e-07 62.0 181 28.2
CAN.G548.23 Capsicum annuum HOM05D006002 ORTHO05D007651 2.5e-07 60.8 133 33.1


User provided reference genes

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