Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g7599 Utricularia gibba HOM05D003649 ORTHO05D004498 3.9e-235 817.8 423 100.0
SGA_v2.0_scaffold73G24356 Striga asiatica HOM05D003649 ORTHO05D004498 1.1e-173 613.6 437 74.1
SalBow5G3252 Salvia bowleyana HOM05D003649 ORTHO05D004498 6.2e-172 607.8 430 73.5
SalBow6G0551 Salvia bowleyana HOM05D003649 ORTHO05D004498 1.1e-168 597.0 430 73.5
MSTRG.6707 Avicennia marina HOM05D003649 ORTHO05D004498 1.4e-168 596.7 431 73.1
SalBow8G0566 Salvia bowleyana HOM05D003649 ORTHO05D004498 3.2e-168 595.5 430 73.3
Oeu058434.1 Olea europaea HOM05D003649 ORTHO05D004498 4.0e-163 578.6 433 70.4
Migut.M00658 Erythranthe guttata HOM05D003649 ORTHO05D004498 1.3e-145 520.4 431 64.7
TWI38G0227 Tripterygium wilfordii HOM05D003649 ORTHO05D004498 1.8e-142 510.0 426 62.9
CSS0018218 Camellia sinensis var. sinensis HOM05D003649 ORTHO05D004498 2.3e-142 509.6 425 64.9
CSS0028028 Camellia sinensis var. sinensis HOM05D003649 ORTHO05D004498 3.9e-142 508.8 422 64.9
Phvul.004G052800 Phaseolus vulgaris HOM05D003649 ORTHO05D004498 6.7e-142 508.1 425 65.2
Actinidia14919 Actinidia chinensis HOM05D003649 ORTHO05D004498 8.7e-142 507.7 426 63.8
Duzib168G1903 Durio zibethinus HOM05D003649 ORTHO05D004498 1.5e-141 506.9 421 63.2
Gorai.001G124600 Gossypium raimondii HOM05D003649 ORTHO05D004498 9.7e-141 504.2 420 63.1
Gohir.A07G112700 Gossypium hirsutum HOM05D003649 ORTHO05D004498 6.3e-140 501.5 420 62.6
GSVIVG01038352001 Vitis vinifera HOM05D003649 ORTHO05D004498 8.2e-140 501.1 428 64.3
Gohir.D07G116200 Gossypium hirsutum HOM05D003649 ORTHO05D004498 1.1e-139 500.7 420 62.6
PGR142G4312 Punica granatum HOM05D003649 ORTHO05D004498 1.1e-139 500.7 425 63.8
Sc26g0001160 Simmondsia chinensis HOM05D003649 ORTHO05D004498 2.4e-139 499.6 437 62.5
Potri.001G394000 Populus trichocarpa HOM05D003649 ORTHO05D004498 5.3e-139 498.4 428 61.7
Ca_25060_v3 Cicer arietinum L. HOM05D003649 ORTHO05D004498 1.2e-138 497.3 426 63.4
Cfa011266 Carpinus fangiana HOM05D003649 ORTHO05D004498 5.9e-138 495.0 427 61.8
Potri.011G112500 Populus trichocarpa HOM05D003649 ORTHO05D004498 2.2e-137 493.0 426 61.5
CiPaw.08G013900 Carya illinoinensis HOM05D003649 ORTHO05D004498 3.8e-137 492.3 426 60.8
Glyma.05G087100 Glycine max HOM05D003649 ORTHO05D004498 1.4e-136 490.3 425 62.1
Atru.chr3.3291 Acer truncatum HOM05D003649 ORTHO05D004498 4.2e-136 488.8 441 61.7
Actinidia37054 Actinidia chinensis HOM05D003649 ORTHO05D004498 4.2e-136 488.8 411 64.0
Hma1.2p1_0505F.1_g168130 Hydrangea macrophylla HOM05D003649 ORTHO05D004498 5.5e-136 488.4 422 63.5
Lalb_Chr21g0316901 Lupinus albus HOM05D003649 ORTHO05D004498 7.9e-135 484.6 431 61.0
Lj2g0021753 Lotus japonicus HOM05D003649 ORTHO05D004498 1.4e-134 483.8 422 62.1
GSVIVG01011050001 Vitis vinifera HOM05D003649 ORTHO05D004498 1.8e-134 483.4 422 61.4
vmacro10596 Vaccinium macrocarpon HOM05D003649 ORTHO05D004498 2.3e-134 483.0 460 59.1
Prupe.4G148600 Prunus persica HOM05D003649 ORTHO05D004498 3.0e-134 482.6 430 60.7
HanXRQChr13g0424451 Helianthus annuus HOM05D003649 ORTHO05D004498 5.1e-134 481.9 434 59.7
Aqoxy1G02521 Aquilegia oxysepala HOM05D003649 ORTHO05D004498 1.9e-133 479.9 416 60.6
Manes.14G152600 Manihot esculenta HOM05D003649 ORTHO05D004498 1.9e-133 479.9 425 61.4
Peaxi162Scf00111g00723 Petunia axillaris HOM05D003649 ORTHO05D004498 2.5e-133 479.6 427 60.7
Sabra11G0099700 Salix brachista HOM05D003649 ORTHO05D004498 3.3e-133 479.2 440 59.1
Rhsim09G0104200 Rhododendron simsii HOM05D003649 ORTHO05D004498 7.4e-133 478.0 431 61.7
DCAR_002270 Daucus carota HOM05D003649 ORTHO05D004498 1.3e-132 477.2 423 62.9
Manes.14G150400 Manihot esculenta HOM05D003649 ORTHO05D004498 3.7e-132 475.7 428 60.7
EL10Ac3g06484 Beta vulgaris HOM05D003649 ORTHO05D004498 4.8e-132 475.3 429 59.9
QL02p065039 Quercus lobata HOM05D003649 ORTHO05D004498 1.1e-131 474.2 441 59.9
Cc05_g10190 Coffea canephora HOM05D003649 ORTHO05D004498 1.4e-131 473.8 333 73.9
MD10G1195400 Malus domestica HOM05D003649 ORTHO05D004498 1.4e-131 473.8 442 59.5
Nn7g38381 Nelumbo nucifera HOM05D003649 ORTHO05D004498 1.4e-131 473.8 425 60.5
Thecc.09G274600 Theobroma cacao HOM05D003649 ORTHO05D004498 1.4e-131 473.8 420 60.0
TPR.G34458 Trifolium pratense HOM05D003649 ORTHO05D004498 3.1e-131 472.6 444 57.7
CANSAT01G2347 Cannabis sativa HOM05D003649 ORTHO05D004498 4.1e-131 472.2 426 60.1
Lsat_1_v5_gn_5_148460 Lactuca sativa HOM05D003649 ORTHO05D004498 9.1e-131 471.1 428 60.0
CARHR286950 Cardamine hirsuta HOM05D003649 ORTHO05D004498 3.8e-129 465.7 430 58.6
Migut.M00659 Erythranthe guttata HOM05D003649 ORTHO05D004498 6.5e-129 464.9 433 60.3
AT1G31660 Arabidopsis thaliana HOM05D003649 ORTHO05D004498 8.5e-129 464.5 428 57.9
arahy.Tifrunner.gnm1.ann1.V43L5Z Arachis hypogaea HOM05D003649 ORTHO05D004498 1.1e-128 464.2 415 58.3
Aa31LG2G14410 Aethionema arabicum HOM05D003649 ORTHO05D004498 2.5e-128 463.0 418 59.8
Ah.13g074570 Amaranthus hybridus HOM05D003649 ORTHO05D004498 4.2e-128 462.2 434 58.5
COL.COLO4_24336 Corchorus olitorius HOM05D003649 ORTHO05D004498 5.5e-128 461.8 437 57.7
Nitab4.5_0001924g0070 Nicotiana tabacum HOM05D003649 ORTHO05D004498 9.4e-128 461.1 378 63.8
MELO3C024126.2 Cucumis melo HOM05D003649 ORTHO05D004498 3.6e-127 459.1 417 58.0
Carub.0001s2998 Capsella rubella HOM05D003649 ORTHO05D004498 7.9e-127 458.0 429 57.6
PSO675G2950 Papaver somniferum HOM05D003649 ORTHO05D004498 7.9e-127 458.0 424 59.0
Hund24921 Selenicereus undatus HOM05D003649 ORTHO05D004498 1.0e-126 457.6 418 59.1
arahy.Tifrunner.gnm1.ann1.2990BW Arachis hypogaea HOM05D003649 ORTHO05D004498 3.9e-126 455.7 426 57.3
CsaV3_7G025330 Cucumis sativus L. HOM05D003649 ORTHO05D004498 5.1e-126 455.3 417 57.6
PSO541G1065 Papaver somniferum HOM05D003649 ORTHO05D004498 7.4e-125 451.4 424 59.0
TAR627G1042 Trochodendron aralioides HOM05D003649 ORTHO05D004498 9.7e-125 451.1 376 63.8
BcaB03g13795 Brassica carinata HOM05D003649 ORTHO05D004498 1.7e-124 450.3 446 55.4
Psat2g144640 Pisum sativum HOM05D003649 ORTHO05D004498 4.8e-124 448.7 405 59.8
Glyma.03G190900 Glycine max HOM05D003649 ORTHO05D004498 8.2e-124 448.0 425 58.8
Thhalv10007604m.g Eutrema salsugineum HOM05D003649 ORTHO05D004498 1.8e-123 446.8 425 55.5
THA.LOC104814384 Tarenaya hassleriana HOM05D003649 ORTHO05D004498 2.4e-123 446.4 427 58.3
BraA07t28735Z Brassica rapa HOM05D003649 ORTHO05D004498 3.1e-123 446.0 447 55.3
Migut.J00669 Erythranthe guttata HOM05D003649 ORTHO05D004498 3.1e-123 446.0 432 60.0
A07p09400 Brassica napus HOM05D003649 ORTHO05D004498 7.0e-123 444.9 447 55.7
ECA236G2713 Erigeron canadensis HOM05D003649 ORTHO05D004498 9.1e-123 444.5 392 60.2
arahy.Tifrunner.gnm1.ann1.FP5V95 Arachis hypogaea HOM05D003649 ORTHO05D004498 1.5e-122 443.7 455 53.8
MBI17_g43195_MAGBIO Magnolia biondii HOM05D003649 ORTHO05D004498 1.5e-122 443.7 408 60.8
Medtr5g025980 Medicago truncatula HOM05D003649 ORTHO05D004498 3.4e-122 442.6 425 57.6
VMungo1127G0750 Vigna mungo HOM05D003649 ORTHO05D004498 4.5e-122 442.2 376 64.4
Nitab4.5_0001864g0020 Nicotiana tabacum HOM05D003649 ORTHO05D004498 5.9e-122 441.8 439 56.0
C07p14470 Brassica napus HOM05D003649 ORTHO05D004498 1.0e-121 441.0 433 56.1
ClCG09G009520 Citrullus lanatus HOM05D003649 ORTHO05D004498 1.0e-121 441.0 429 56.2
Sp1g27340 Schrenkiella parvula HOM05D003649 ORTHO05D004498 1.0e-121 441.0 428 55.8
ATR1132G059 Amborella trichopoda HOM05D003649 ORTHO05D004498 1.3e-121 440.7 407 57.7
Eucgr.F01411 Eucalyptus grandis HOM05D003649 ORTHO05D004498 2.2e-121 439.9 426 59.2
PGSC0003DMG400027653 Solanum tuberosum HOM05D003649 ORTHO05D004498 2.9e-121 439.5 426 57.7
EL10Ac3g06580 Beta vulgaris HOM05D003649 ORTHO05D004498 5.0e-121 438.7 433 56.6
BolC7t41946H Brassica oleracea HOM05D003649 ORTHO05D004498 8.5e-121 438.0 433 55.9
Haze_02513 Corylus avellana HOM05D003649 ORTHO05D004498 8.5e-121 438.0 472 52.8
Sopen07g029910 Solanum pennellii HOM05D003649 ORTHO05D004498 8.5e-121 438.0 431 56.8
arahy.Tifrunner.gnm1.ann1.956DWW Arachis hypogaea HOM05D003649 ORTHO05D004498 1.9e-120 436.8 408 56.1
RcHm_v2.0_Chr5g0027651 Rosa chinensis HOM05D003649 ORTHO05D004498 9.4e-120 434.5 456 55.7
AUR62036018 Chenopodium quinoa HOM05D003649 ORTHO05D004498 3.6e-119 432.6 416 57.5
FAN16G3269 Fragaria x ananassa HOM05D003649 ORTHO05D004498 6.1e-119 431.8 448 55.8
Sed0023018 Sechium edule HOM05D003649 ORTHO05D004498 1.0e-118 431.0 422 57.3
FAN21G3990 Fragaria x ananassa HOM05D003649 ORTHO05D004498 1.8e-118 430.3 447 56.4
CDE06G0350 Ceratophyllum demersum HOM05D003649 ORTHO05D004498 2.3e-118 429.9 395 58.0
Haze_18856 Corylus avellana HOM05D003649 ORTHO05D004498 2.3e-118 429.9 491 50.7
FvH4_3g16580 Fragaria vesca HOM05D003649 ORTHO05D004498 2.3e-118 429.9 453 56.1
FAN25G2823 Fragaria x ananassa HOM05D003649 ORTHO05D004498 3.9e-118 429.1 444 55.0
A09p34660 Brassica napus HOM05D003649 ORTHO05D004498 1.5e-117 427.2 416 56.2
FAN21G1332 Fragaria x ananassa HOM05D003649 ORTHO05D004498 3.7e-116 422.5 442 56.3
BraA09t39000Z Brassica rapa HOM05D003649 ORTHO05D004498 6.3e-116 421.8 416 55.3
FAN11G3158 Fragaria x ananassa HOM05D003649 ORTHO05D004498 1.4e-115 420.6 439 54.9
MD05G1209000 Malus domestica HOM05D003649 ORTHO05D004498 2.4e-115 419.9 385 60.0
Rhsim09G0104400 Rhododendron simsii HOM05D003649 ORTHO05D004498 3.1e-115 419.5 413 57.4
Ciclev10023274m.g Citrus clementina HOM05D003649 ORTHO05D004498 7.7e-114 414.8 327 64.2
Solyc07g056550.3 Solanum lycopersicum HOM05D003649 ORTHO05D004498 1.5e-112 410.6 404 56.7
AUR62035508 Chenopodium quinoa HOM05D003649 ORTHO05D004498 5.5e-112 408.7 425 54.1
Lj1C808T9 Lonicera japonica HOM05D003649 ORTHO05D004498 1.2e-111 407.5 390 60.3
Cpa.g.sc54.5 Carica papaya HOM05D003649 ORTHO05D004498 1.0e-110 404.4 436 53.9
BcaB07g32813 Brassica carinata HOM05D003649 ORTHO05D004498 2.3e-110 403.3 430 52.6
BcaC05g27183 Brassica carinata HOM05D003649 ORTHO05D004498 8.8e-110 401.4 408 53.4
Os09g0352400 Oryza sativa ssp. japonica HOM05D003649 ORTHO05D004498 8.8e-110 401.4 425 54.8
Zm00001eb065940 Zea mays HOM05D003649 ORTHO05D004498 2.9e-105 386.3 410 53.4
COL.COLO4_22663 Corchorus olitorius HOM05D003649 ORTHO05D004498 5.2e-102 375.6 402 53.0
HPP92_001514 Vanilla planifolia HOM05D003649 ORTHO05D004498 1.1e-99 367.9 391 54.5
Thecc.09G275100 Theobroma cacao HOM05D003649 ORTHO05D004498 2.4e-99 366.7 327 58.4
Ah.13g066610 Amaranthus hybridus HOM05D003649 ORTHO05D004498 5.4e-99 365.5 353 56.9
Pp3c14_4070 Physcomitrium patens HOM05D003649 ORTHO05D004498 5.4e-99 365.5 437 47.1
PSO339G1025 Papaver somniferum HOM05D003649 ORTHO05D004498 7.0e-99 365.2 426 49.5
Pp3c10_5710 Physcomitrium patens HOM05D003649 ORTHO05D004498 9.1e-99 364.8 441 47.4
Mapoly0048s0058 Marchantia polymorpha HOM05D003649 ORTHO05D004498 3.5e-98 362.8 322 57.1
PSO339G4670 Papaver somniferum HOM05D003649 ORTHO05D004498 4.5e-98 362.5 426 49.3
CBR_g984 Chara braunii HOM05D003649 ORTHO05D004498 1.0e-94 351.3 381 50.1
vmacro10597 Vaccinium macrocarpon HOM05D003649 ORTHO05D004498 1.5e-93 347.4 471 47.3
BolC5t31810H Brassica oleracea HOM05D003649 ORTHO05D004498 3.7e-92 342.8 353 53.8
Aqoxy5G01320 Aquilegia oxysepala HOM05D003649 ORTHO05D004498 8.3e-92 341.7 282 62.1
SMO358G0130 Selaginella moellendorffii HOM05D003649 ORTHO05D004498 1.4e-91 340.9 404 47.5
AagrBONN_evm.TU.Sc2ySwM_117.301 Anthoceros agrestis HOM05D003649 ORTHO05D004498 2.3e-89 333.6 293 57.3
MCO03G098 Micromonas commoda HOM05D003649 ORTHO05D004498 9.5e-88 328.2 312 54.2
Gohir.A09G098001 Gossypium hirsutum HOM05D003649 ORTHO05D004498 3.7e-84 316.2 236 66.9
CANSAT80G0167 Cannabis sativa HOM05D003649 ORTHO05D004498 6.4e-84 315.5 249 64.7
Cfa011268 Carpinus fangiana HOM05D007039 ORTHO05D008886 5.6e-80 302.4 279 58.4
Thhalv10028678m.g Eutrema salsugineum HOM05D003649 ORTHO05D004498 2.8e-79 300.1 391 45.3
PRCOL_00003636 Prasinoderma coloniale HOM05D003649 ORTHO05D004498 8.0e-79 298.5 312 50.3
TPR.G9666 Trifolium pratense HOM05D003649 ORTHO05D004498 8.0e-79 298.5 261 60.5
A07p11220 Brassica napus HOM05D003649 ORTHO05D004498 5.2e-78 295.8 381 48.6
A07p08470 Brassica napus HOM05D003649 ORTHO05D004498 8.9e-78 295.0 377 46.4
BcaC06g35364 Brassica carinata HOM05D003649 ORTHO05D004498 1.3e-76 291.2 381 48.0
Cre01.g063267 Chlamydomonas reinhardtii HOM05D003649 ORTHO05D004498 1.7e-76 290.8 468 40.8
C07p13190 Brassica napus HOM05D003649 ORTHO05D004498 7.8e-74 282.0 372 45.4
BolC7t41812H Brassica oleracea HOM05D003649 ORTHO05D004498 1.0e-73 281.6 372 45.4
BraA07t28915Z Brassica rapa HOM05D003649 ORTHO05D004498 1.7e-73 280.8 372 46.5
RcHm_v2.0_Chr6g0291881 Rosa chinensis HOM05D003649 ORTHO05D004498 1.5e-72 277.7 329 49.5
C07p16930 Brassica napus HOM05D003649 ORTHO05D004498 1.6e-71 274.2 403 43.9
BcaC06g35591 Brassica carinata HOM05D003649 ORTHO05D004498 4.4e-69 266.2 360 45.0
BolC7t42199H Brassica oleracea HOM05D003649 ORTHO05D004498 2.2e-68 263.8 359 47.6
Cfa024010 Carpinus fangiana HOM05D003649 ORTHO05D004498 8.7e-57 225.3 322 41.6
CANSAT54G0397 Cannabis sativa HOM05D003649 ORTHO05D004498 3.6e-55 219.9 180 62.2
SEGI_32462 Sequoiadendron giganteum HOM05D003649 ORTHO05D004498 9.0e-46 188.7 144 63.9
Sabra16G0258400 Salix brachista HOM05D003649 ORTHO05D004498 1.3e-39 168.3 123 67.5
Atru.chr3.2262 Acer truncatum HOM05D003649 ORTHO05D004498 2.8e-39 167.2 142 63.4
Atru.chr3.2268 Acer truncatum HOM05D003649 ORTHO05D004498 5.8e-37 159.5 428 33.6
Pp3c1_22730 Physcomitrium patens HOM05D003649 ORTHO05D004498 5.8e-37 159.5 153 56.2
arahy.Tifrunner.gnm1.ann1.KE86EX Arachis hypogaea HOM05D003649 ORTHO05D004498 1.6e-34 151.4 194 45.9
C07p16950 Brassica napus HOM05D003649 ORTHO05D027520 3.8e-28 130.2 205 39.5
DCAR_030783 Daucus carota HOM05D003649 ORTHO05D004498 1.5e-24 118.2 157 53.5
RhsimUnG0127900 Rhododendron simsii HOM05D003649 ORTHO05D004498 1.5e-24 118.2 82 72.0
SEGI_37931 Sequoiadendron giganteum HOM05D003649 ORTHO05D004498 8.2e-23 112.5 94 62.8
arahy.Tifrunner.gnm1.ann1.S7QI7K Arachis hypogaea HOM05D003649 ORTHO05D004498 5.3e-22 109.8 166 43.4
Actinidia13653 Actinidia chinensis HOM05D003649 ORTHO05D004498 1.0e-20 105.5 133 47.4
BcaC05g27926 Brassica carinata HOM05D003649 ORTHO05D004498 1.6e-18 98.2 303 33.3
BolC9t56391H Brassica oleracea HOM05D003649 ORTHO05D004498 2.7e-18 97.4 80 55.0
DCAR_030782 Daucus carota HOM05D003649 ORTHO05D004498 2.7e-18 97.4 67 73.1
AL6G50590 Arabidopsis lyrata HOM05D003649 ORTHO05D004498 1.0e-17 95.5 93 49.5
C09p35520 Brassica napus HOM05D003649 ORTHO05D004498 3.3e-16 90.5 75 56.0
A09p28020 Brassica napus HOM05D003649 ORTHO05D004498 2.8e-15 87.4 75 56.0
BraA07t28632Z Brassica rapa HOM05D003649 ORTHO05D004498 1.4e-14 85.1 82 51.2
arahy.Tifrunner.gnm1.ann1.CT835L Arachis hypogaea HOM05D003649 ORTHO05D004498 1.8e-14 84.7 119 45.4
BolC7t42200H Brassica oleracea HOM05D003649 ORTHO05D027520 1.2e-13 82.0 137 32.8
SEGI_11889 Sequoiadendron giganteum HOM05D003649 ORTHO05D004498 2.0e-13 81.3 133 39.1
BolC7t42195H Brassica oleracea HOM05D003649 ORTHO05D040526 2.9e-12 77.4 93 47.3
SGA_v2.0_scaffold30G12442 Striga asiatica HOM05D003649 ORTHO05D004498 1.4e-11 75.1 73 58.9
C07p16940 Brassica napus HOM05D003649 ORTHO05D027520 7.2e-11 72.8 137 30.7
SGA_v2.0_scaffold24G10283 Striga asiatica HOM05D003649 ORTHO05D031702 7.9e-10 69.3 49 71.4
BcaC04g21367 Brassica carinata HOM05D001554 ORTHO05D001481 2.0e-08 64.7 54 50.0
C09p32650 Brassica napus HOM05D003649 ORTHO05D004498 2.0e-08 64.7 54 50.0
C09p35530 Brassica napus HOM05D003649 ORTHO05D004498 2.8e-07 60.8 202 36.1
MBI19_g34544_MAGBIO Magnolia biondii HOM05D000961 ORTHO05D000841 4.8e-07 60.1 39 71.8
C07p16900 Brassica napus HOM05D003649 ORTHO05D040526 8.2e-07 59.3 80 45.0
Atru.chr3.2263 Acer truncatum HOM05D003649 ORTHO05D004498 5.3e-06 56.6 71 52.1
Atru.chr3.2269 Acer truncatum HOM05D003649 ORTHO05D004498 7.0e-06 56.2 71 52.1
Thecc.09G274800 Theobroma cacao HOM05D003649 ORTHO05D004498 9.1e-06 55.8 40 62.5


User provided reference genes

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