Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g7583 Utricularia gibba HOM05D007084 ORTHO05D008776 2.5e-181 638.6 325 100.0
SGA_v2.0_scaffold7G03869 Striga asiatica HOM05D007084 ORTHO05D008776 3.7e-84 315.8 348 53.7
Migut.M01299 Erythranthe guttata HOM05D007084 ORTHO05D008776 8.3e-84 314.7 351 54.7
SalBow5G0122 Salvia bowleyana HOM05D007084 ORTHO05D008776 3.2e-75 286.2 345 50.4
Cc09_g01900 Coffea canephora HOM05D007084 ORTHO05D008776 3.2e-67 259.6 373 47.7
GSVIVG01012658001 Vitis vinifera HOM05D007084 ORTHO05D008776 3.2e-67 259.6 354 46.3
Hma1.2p1_0091F.1_g046270 Hydrangea macrophylla HOM05D007084 ORTHO05D008776 1.2e-66 257.7 347 48.7
CSS0017809 Camellia sinensis var. sinensis HOM05D007084 ORTHO05D008776 1.3e-65 254.2 345 45.8
Lsat_1_v5_gn_1_124280 Lactuca sativa HOM05D007084 ORTHO05D008776 1.3e-65 254.2 340 45.6
Sc17g0007240 Simmondsia chinensis HOM05D007084 ORTHO05D008776 1.7e-65 253.8 273 51.6
Actinidia05525 Actinidia chinensis HOM05D007084 ORTHO05D008776 1.5e-64 250.8 339 44.8
TAR624G0375 Trochodendron aralioides HOM05D007084 ORTHO05D008776 5.6e-64 248.8 349 45.3
AUR62021978 Chenopodium quinoa HOM05D007084 ORTHO05D008776 9.6e-64 248.1 342 46.8
Dinv20035 Davidia involucrata HOM05D007084 ORTHO05D008776 2.8e-63 246.5 350 45.4
Nitab4.5_0002155g0080 Nicotiana tabacum HOM05D007084 ORTHO05D008776 2.8e-63 246.5 357 46.8
Potri.004G018300 Populus trichocarpa HOM05D007084 ORTHO05D008776 4.8e-63 245.7 349 45.8
vmacro15815 Vaccinium macrocarpon HOM05D007084 ORTHO05D008776 1.4e-62 244.2 339 45.1
FvH4_3g02430 Fragaria vesca HOM05D007084 ORTHO05D008776 2.0e-61 240.4 356 44.1
A09p26060 Brassica napus HOM05D007084 ORTHO05D008776 2.6e-61 240.0 345 44.3
Ciclev10015907m.g Citrus clementina HOM05D007084 ORTHO05D008776 4.5e-61 239.2 344 43.6
RcHm_v2.0_Chr5g0003681 Rosa chinensis HOM05D007084 ORTHO05D008776 4.5e-61 239.2 359 43.7
BraA09t38173Z Brassica rapa HOM05D007084 ORTHO05D008776 7.6e-61 238.4 344 43.9
Manes.17G037300 Manihot esculenta HOM05D007084 ORTHO05D008776 7.6e-61 238.4 272 50.0
Rhsim02G0110300 Rhododendron simsii HOM05D007084 ORTHO05D008776 9.9e-61 238.0 336 45.8
AL6G48360 Arabidopsis lyrata HOM05D007084 ORTHO05D008776 1.7e-60 237.3 342 43.9
Carub.0006s3278 Capsella rubella HOM05D007084 ORTHO05D008776 2.9e-60 236.5 342 44.2
COL.COLO4_31746 Corchorus olitorius HOM05D007084 ORTHO05D008776 2.9e-60 236.5 351 44.2
MD10G1318100 Malus domestica HOM05D007084 ORTHO05D008776 2.9e-60 236.5 351 45.9
Gohir.D06G153400 Gossypium hirsutum HOM05D007084 ORTHO05D008776 3.8e-60 236.1 333 44.4
VMungo1215G0304 Vigna mungo HOM05D007084 ORTHO05D008776 3.8e-60 236.1 298 48.0
BcaC04g21332 Brassica carinata HOM05D007084 ORTHO05D008776 6.4e-60 235.3 352 42.0
C09p33070 Brassica napus HOM05D007084 ORTHO05D008776 6.4e-60 235.3 352 42.0
CsaV3_6G049130 Cucumis sativus L. HOM05D007084 ORTHO05D008776 6.4e-60 235.3 353 43.3
Aa31LG9G9630 Aethionema arabicum HOM05D007084 ORTHO05D008776 8.4e-60 235.0 322 46.0
AT4G04870 Arabidopsis thaliana HOM05D007084 ORTHO05D008776 1.1e-59 234.6 343 43.7
ClCG01G022070 Citrullus lanatus HOM05D007084 ORTHO05D008776 2.4e-59 233.4 348 44.0
Nitab4.5_0007448g0030 Nicotiana tabacum HOM05D007084 ORTHO05D008776 3.2e-59 233.0 351 45.0
QL05p074023 Quercus lobata HOM05D007084 ORTHO05D008776 3.2e-59 233.0 347 44.1
Os01g0789100 Oryza sativa ssp. japonica HOM05D007084 ORTHO05D008776 4.2e-59 232.6 342 43.6
CANSAT56G0381 Cannabis sativa HOM05D007084 ORTHO05D008776 5.4e-59 232.3 348 44.0
Prupe.4G023700 Prunus persica HOM05D007084 ORTHO05D008776 5.4e-59 232.3 343 44.0
Sopen10g001280 Solanum pennellii HOM05D007084 ORTHO05D008776 5.4e-59 232.3 346 46.0
PGSC0003DMG400011258 Solanum tuberosum HOM05D007084 ORTHO05D008776 5.4e-59 232.3 346 46.8
BolC9t56141H Brassica oleracea HOM05D007084 ORTHO05D008776 7.1e-59 231.9 351 42.2
TPR.G7634 Trifolium pratense HOM05D007084 ORTHO05D008776 7.1e-59 231.9 337 43.6
BcaB01g01841 Brassica carinata HOM05D007084 ORTHO05D008776 9.3e-59 231.5 348 43.1
Thhalv10028782m.g Eutrema salsugineum HOM05D007084 ORTHO05D008776 9.3e-59 231.5 344 43.6
Gorai.010G179400 Gossypium raimondii HOM05D007084 ORTHO05D008776 9.3e-59 231.5 344 43.0
Lj6g0011030 Lotus japonicus HOM05D007084 ORTHO05D008776 1.2e-58 231.1 343 42.3
Phvul.003G077300 Phaseolus vulgaris HOM05D007084 ORTHO05D008776 1.2e-58 231.1 267 49.1
Sed0006702 Sechium edule HOM05D007084 ORTHO05D008776 2.1e-58 230.3 351 44.4
Aqoxy2G01542 Aquilegia oxysepala HOM05D007084 ORTHO05D008776 2.7e-58 229.9 343 42.6
THA.LOC104812962 Tarenaya hassleriana HOM05D007084 ORTHO05D008776 2.7e-58 229.9 348 44.3
EL10Ac8g20023 Beta vulgaris HOM05D007084 ORTHO05D008776 4.6e-58 229.2 318 47.8
CAN.G105.15 Capsicum annuum HOM05D007084 ORTHO05D008776 6.0e-58 228.8 357 44.0
AUR62012678 Chenopodium quinoa HOM05D007084 ORTHO05D008776 6.0e-58 228.8 260 50.4
Sp6g04110 Schrenkiella parvula HOM05D007084 ORTHO05D008776 6.0e-58 228.8 350 42.0
Cfa000247 Carpinus fangiana HOM05D007084 ORTHO05D008776 7.9e-58 228.4 349 42.4
CARHR252700 Cardamine hirsuta HOM05D007084 ORTHO05D008776 1.0e-57 228.0 343 42.9
Duzib160G0109 Durio zibethinus HOM05D007084 ORTHO05D008776 1.0e-57 228.0 350 42.6
Gohir.A06G147600 Gossypium hirsutum HOM05D007084 ORTHO05D008776 1.0e-57 228.0 347 43.2
Thecc.06G217700 Theobroma cacao HOM05D007084 ORTHO05D008776 1.0e-57 228.0 349 44.1
Haze_06776 Corylus avellana HOM05D007084 ORTHO05D008776 1.8e-57 227.3 349 43.0
Nn1g07109 Nelumbo nucifera HOM05D007084 ORTHO05D008776 1.8e-57 227.3 365 43.0
MD05G1343100 Malus domestica HOM05D007084 ORTHO05D008776 2.3e-57 226.9 355 44.2
Sabra04G0010200 Salix brachista HOM05D007084 ORTHO05D008776 5.1e-57 225.7 346 45.7
Dinv13874 Davidia involucrata HOM05D007084 ORTHO05D008776 6.7e-57 225.3 396 40.2
ECA248G3788 Erigeron canadensis HOM05D007084 ORTHO05D008776 1.1e-56 224.6 338 43.8
HanXRQChr01g0004301 Helianthus annuus HOM05D007084 ORTHO05D008776 1.1e-56 224.6 340 43.2
Medtr2g022840 Medicago truncatula HOM05D007084 ORTHO05D008776 1.1e-56 224.6 337 43.9
arahy.Tifrunner.gnm1.ann1.JJP1G0 Arachis hypogaea HOM05D007084 ORTHO05D008776 1.5e-56 224.2 274 48.2
arahy.Tifrunner.gnm1.ann1.YK9IP3 Arachis hypogaea HOM05D007084 ORTHO05D008776 2.5e-56 223.4 274 48.2
Glyma.07G259200 Glycine max HOM05D007084 ORTHO05D008776 5.6e-56 222.2 339 44.2
TWI38G0963 Tripterygium wilfordii HOM05D007084 ORTHO05D008776 5.6e-56 222.2 275 46.9
Solyc10g005290.4 Solanum lycopersicum HOM05D007084 ORTHO05D008776 9.6e-56 221.5 364 44.0
Ca_00622_v3 Cicer arietinum L. HOM05D007084 ORTHO05D008776 2.8e-55 219.9 327 43.7
Peaxi162Scf00203g00128 Petunia axillaris HOM05D007084 ORTHO05D008776 2.0e-53 213.8 326 43.3
Psat1g181960 Pisum sativum HOM05D007084 ORTHO05D008776 7.6e-53 211.8 342 41.8
Lalb_Chr12g0196111 Lupinus albus HOM05D007084 ORTHO05D008776 9.9e-53 211.5 270 44.4
Eucgr.D01306 Eucalyptus grandis HOM05D007084 ORTHO05D008776 5.5e-51 205.7 309 45.6
HPP92_017602 Vanilla planifolia HOM05D007084 ORTHO05D008776 6.0e-50 202.2 296 42.9
Zm00001eb151100 Zea mays HOM05D007084 ORTHO05D008776 1.9e-48 197.2 312 43.9
DCAR_028171 Daucus carota HOM05D007084 ORTHO05D008776 3.7e-47 193.0 263 44.9
ATR0752G074 Amborella trichopoda HOM05D007084 ORTHO05D008776 4.8e-47 192.6 292 42.5
PSO832G2811 Papaver somniferum HOM05D007084 ORTHO05D008776 2.6e-45 186.8 352 39.5
PSO210G7580 Papaver somniferum HOM05D007084 ORTHO05D008776 1.1e-43 181.4 195 51.8
Lj1A1228T73 Lonicera japonica HOM05D007084 ORTHO05D008776 1.9e-43 180.6 173 56.1
MBI02_g28333_MAGBIO Magnolia biondii HOM05D007084 ORTHO05D008776 6.0e-42 175.6 332 38.0
Atru.chr10.2184 Acer truncatum HOM05D007084 ORTHO05D008776 3.9e-41 172.9 182 52.7
CDE11G1072 Ceratophyllum demersum HOM05D007084 ORTHO05D008776 8.7e-41 171.8 277 40.8
CiPaw.09G089600 Carya illinoinensis HOM05D007084 ORTHO05D008776 1.6e-39 167.5 309 40.8
PSO591G0421 Papaver somniferum HOM05D007084 ORTHO05D008776 1.3e-36 157.9 189 45.0
Mapoly0072s0085 Marchantia polymorpha HOM05D007084 ORTHO05D008776 5.7e-32 142.5 194 43.8
SalBow5G2840 Salvia bowleyana HOM05D007084 ORTHO05D008776 1.2e-29 134.8 194 43.8
SalBow5G4783 Salvia bowleyana HOM05D007084 ORTHO05D008776 2.7e-26 123.6 107 59.8
Pp3c12_14310 Physcomitrium patens HOM05D007084 ORTHO05D008776 3.3e-24 116.7 188 38.8
CBR_g8026 Chara braunii HOM05D007084 ORTHO05D008776 9.7e-24 115.2 220 35.0
MELO3C007382.2 Cucumis melo HOM05D007084 ORTHO05D008776 2.0e-21 107.5 247 37.7
Hund21394 Selenicereus undatus HOM05D007084 ORTHO05D008776 1.6e-18 97.8 82 61.0
FAN21G1856 Fragaria x ananassa HOM05D007084 ORTHO05D008776 2.3e-17 94.0 212 37.7
FAN18G3368 Fragaria x ananassa HOM05D007084 ORTHO05D008776 8.8e-17 92.0 206 37.4
SMO356G0510 Selaginella moellendorffii HOM05D007084 ORTHO05D008776 1.4e-14 84.7 185 36.2
Cre13.g604700 Chlamydomonas reinhardtii HOM05D007084 ORTHO05D008776 4.1e-14 83.2 225 30.2
FAN25G0957 Fragaria x ananassa HOM05D007084 ORTHO05D008776 9.4e-11 72.0 46 71.7
SEGI_14982 Sequoiadendron giganteum HOM05D007084 ORTHO05D008776 1.0e-09 68.6 184 31.5
Carub.0001s3223 Capsella rubella HOM05D007084 ORTHO05D008776 2.3e-09 67.4 99 40.4
Cpa.g.sc198.29 Carica papaya HOM05D007084 ORTHO05D008776 1.5e-08 64.7 182 34.1
PRCOL_00002675 Prasinoderma coloniale HOM05D007084 ORTHO05D008776 3.7e-07 60.1 204 28.4
Cfa023453 Carpinus fangiana HOM05D007084 ORTHO05D008776 3.1e-06 57.0 201 27.9


User provided reference genes

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