Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g7579 Utricularia gibba HOM05D004496 ORTHO05D005513 2.1e-149 532.3 267 100.0
Phvul.003G081900 Phaseolus vulgaris HOM05D004496 ORTHO05D005513 8.5e-18 95.1 210 37.6
Migut.M01368 Erythranthe guttata HOM05D004496 ORTHO05D005513 4.7e-16 89.4 231 33.3
Phvul.006G145400 Phaseolus vulgaris HOM05D004496 ORTHO05D005513 4.0e-15 86.3 127 43.3
SalBow8G1688 Salvia bowleyana HOM05D004496 ORTHO05D005513 4.0e-15 86.3 184 38.0
Ciclev10015792m.g Citrus clementina HOM05D004496 ORTHO05D005513 8.8e-15 85.1 137 43.1
GSVIVG01004818001 Vitis vinifera HOM05D004496 ORTHO05D005513 2.0e-14 84.0 140 43.6
VMungo1215G0904 Vigna mungo HOM05D004496 ORTHO05D005513 2.6e-14 83.6 112 49.1
Nitab4.5_0006125g0010 Nicotiana tabacum HOM05D004496 ORTHO05D005513 5.7e-14 82.4 179 39.7
Nitab4.5_0009517g0010 Nicotiana tabacum HOM05D004496 ORTHO05D005513 5.7e-14 82.4 142 42.3
MSTRG.7183 Avicennia marina HOM05D004496 ORTHO05D005513 7.5e-14 82.0 259 31.7
Peaxi162Scf00294g00097 Petunia axillaris HOM05D004496 ORTHO05D005513 3.7e-13 79.7 179 40.2
TAR624G0763 Trochodendron aralioides HOM05D001218 ORTHO05D003142 3.7e-13 79.7 86 57.0
Solyc02g081150.1 Solanum lycopersicum HOM05D004496 ORTHO05D005513 4.8e-13 79.3 79 58.2
PGSC0003DMG400016725 Solanum tuberosum HOM05D004496 ORTHO05D005513 4.8e-13 79.3 79 58.2
Sopen02g025790 Solanum pennellii HOM05D004496 ORTHO05D005513 1.4e-12 77.8 79 57.0
Nn1g03388 Nelumbo nucifera HOM05D004496 ORTHO05D005513 5.4e-12 75.9 175 32.6
CDE07G1551 Ceratophyllum demersum HOM05D004496 ORTHO05D005513 9.1e-12 75.1 95 51.6
Thhalv10028862m.g Eutrema salsugineum HOM05D004496 ORTHO05D005513 9.1e-12 75.1 172 38.4
CSS0046352 Camellia sinensis var. sinensis HOM05D004496 ORTHO05D005513 1.2e-11 74.7 80 53.8
Atru.chr10.2286 Acer truncatum HOM05D004496 ORTHO05D005513 7.7e-11 72.0 79 57.0
MD10G1327300 Malus domestica HOM05D004496 ORTHO05D005513 7.7e-11 72.0 169 41.4
Rhsim13G0149900 Rhododendron simsii HOM05D004496 ORTHO05D005513 1.0e-10 71.6 188 36.2
Dinv20109 Davidia involucrata HOM05D004496 ORTHO05D005950 1.3e-10 71.2 166 38.0
Thhalv10025698m.g Eutrema salsugineum HOM05D004496 ORTHO05D005513 1.3e-10 71.2 94 48.9
Glyma.09G007852 Glycine max HOM05D004496 ORTHO05D005513 1.3e-10 71.2 123 40.7
Glyma.15G112200 Glycine max HOM05D004496 ORTHO05D005513 1.3e-10 71.2 205 35.1
Lj6g0013804 Lotus japonicus HOM05D004496 ORTHO05D005513 1.7e-10 70.9 144 38.2
CiPaw.09G098400 Carya illinoinensis HOM05D004496 ORTHO05D005513 2.2e-10 70.5 91 48.4
Dinv13941 Davidia involucrata HOM05D004496 ORTHO05D005513 2.2e-10 70.5 168 37.5
RcHm_v2.0_Chr5g0001991 Rosa chinensis HOM05D004496 ORTHO05D005513 2.2e-10 70.5 76 53.9
CiPaw.10G074800 Carya illinoinensis HOM05D004496 ORTHO05D005513 2.9e-10 70.1 80 52.5
Migut.H01591 Erythranthe guttata HOM05D004496 ORTHO05D005513 2.9e-10 70.1 209 34.9
FvH4_3g01370 Fragaria vesca HOM05D004496 ORTHO05D005513 2.9e-10 70.1 83 50.6
Psat1g175480 Pisum sativum HOM05D004496 ORTHO05D005513 2.9e-10 70.1 72 56.9
C07p51660 Brassica napus HOM05D004496 ORTHO05D005513 3.8e-10 69.7 160 36.9
Gohir.D05G176300 Gossypium hirsutum HOM05D004496 ORTHO05D005513 3.8e-10 69.7 177 34.5
BcaNung03756 Brassica carinata HOM05D004496 ORTHO05D005513 5.0e-10 69.3 148 36.5
Lj2P264T22 Lonicera japonica HOM05D004496 ORTHO05D005513 6.5e-10 68.9 143 40.6
Aa31LG9G9910 Aethionema arabicum HOM05D004496 ORTHO05D005950 8.5e-10 68.6 146 39.0
Potri.011G015500 Populus trichocarpa HOM05D004496 ORTHO05D005513 8.5e-10 68.6 179 33.0
Nitab4.5_0005882g0010 Nicotiana tabacum HOM05D004496 ORTHO05D005513 1.1e-09 68.2 179 36.9
Thecc.06G228600 Theobroma cacao HOM05D004496 ORTHO05D005513 1.1e-09 68.2 119 42.9
FAN25G1366 Fragaria x ananassa HOM05D004496 ORTHO05D005513 1.5e-09 67.8 181 33.7
CDE04G1983 Ceratophyllum demersum HOM05D004496 ORTHO05D005513 1.9e-09 67.4 96 47.9
Aqoxy1G03511 Aquilegia oxysepala HOM05D004496 ORTHO05D005513 2.5e-09 67.0 85 47.1
Sed0021394 Sechium edule HOM05D004496 ORTHO05D005513 2.5e-09 67.0 125 41.6
AL7G31460 Arabidopsis lyrata HOM05D004496 ORTHO05D005513 3.2e-09 66.6 94 46.8
CARHR229080 Cardamine hirsuta HOM05D004496 ORTHO05D005513 3.2e-09 66.6 94 46.8
PSO210G3984 Papaver somniferum HOM05D004496 ORTHO05D005513 4.2e-09 66.2 75 52.0
PSO832G0430 Papaver somniferum HOM05D004496 ORTHO05D005513 4.2e-09 66.2 75 52.0
Sc17g0007590 Simmondsia chinensis HOM05D004496 ORTHO05D005513 4.2e-09 66.2 173 32.9
A03p53360 Brassica napus HOM05D004496 ORTHO05D005513 5.5e-09 65.9 74 52.7
Duzib235G0420 Durio zibethinus HOM05D004496 ORTHO05D005513 5.5e-09 65.9 73 54.8
Nn1g07279 Nelumbo nucifera HOM05D004496 ORTHO05D005513 5.5e-09 65.9 80 53.8
CAN.G1014.49 Capsicum annuum HOM05D004496 ORTHO05D005513 7.2e-09 65.5 177 35.6
Lsat_1_v5_gn_7_14880 Lactuca sativa HOM05D004496 ORTHO05D005513 7.2e-09 65.5 76 48.7
THA.LOC104812981 Tarenaya hassleriana HOM05D004496 ORTHO05D005513 7.2e-09 65.5 81 51.9
vmacro03662 Vaccinium macrocarpon HOM05D004496 ORTHO05D005513 7.2e-09 65.5 207 33.3
TAR626G0621 Trochodendron aralioides HOM05D004496 ORTHO05D005513 9.4e-09 65.1 106 42.5
Sabra04G0002100 Salix brachista HOM05D004496 ORTHO05D005513 1.2e-08 64.7 118 43.2
Ca_00696_v3 Cicer arietinum L. HOM05D004496 ORTHO05D005513 1.6e-08 64.3 79 48.1
ECA236G1118 Erigeron canadensis HOM05D004496 ORTHO05D005513 1.6e-08 64.3 83 42.2
Medtr2g024980 Medicago truncatula HOM05D004496 ORTHO05D005513 1.6e-08 64.3 75 54.7
Nitab4.5_0000005g0040 Nicotiana tabacum HOM05D004496 ORTHO05D005513 1.6e-08 64.3 190 33.2
TWI38G0464 Tripterygium wilfordii HOM05D004496 ORTHO05D005513 2.1e-08 63.9 76 55.3
BcaC09g51153 Brassica carinata HOM05D004496 ORTHO05D005513 2.7e-08 63.5 72 54.2
BcaNung03755 Brassica carinata HOM05D004496 ORTHO05D005513 2.7e-08 63.5 72 54.2
A01p13560 Brassica napus HOM05D004496 ORTHO05D005513 2.7e-08 63.5 72 54.2
C01p16430 Brassica napus HOM05D004496 ORTHO05D005513 2.7e-08 63.5 72 54.2
BolC1t01593H Brassica oleracea HOM05D004496 ORTHO05D005513 2.7e-08 63.5 72 54.2
BraA01t01298Z Brassica rapa HOM05D004496 ORTHO05D005513 2.7e-08 63.5 72 54.2
Psat4g004280 Pisum sativum HOM05D004496 ORTHO05D005513 2.7e-08 63.5 73 52.1
Potri.006G270100 Populus trichocarpa HOM05D004496 ORTHO05D005513 2.7e-08 63.5 220 33.6
MSTRG.13128 Avicennia marina HOM05D004496 ORTHO05D005513 3.6e-08 63.2 183 38.8
BcaNung00807 Brassica carinata HOM05D004496 ORTHO05D005513 3.6e-08 63.2 74 54.1
Carub.0007s1912 Capsella rubella HOM05D004496 ORTHO05D005513 4.7e-08 62.8 166 36.1
PGR042G2934 Punica granatum HOM05D004496 ORTHO05D005513 4.7e-08 62.8 136 37.5
CANSAT56G2524 Cannabis sativa HOM05D004496 ORTHO05D005513 6.1e-08 62.4 74 51.4
BcaNung01704 Brassica carinata HOM05D004496 ORTHO05D005513 8.0e-08 62.0 160 32.5
Potri.004G003900 Populus trichocarpa HOM05D004496 ORTHO05D005513 1.0e-07 61.6 116 41.4
arahy.Tifrunner.gnm1.ann1.EH65IB Arachis hypogaea HOM05D004496 ORTHO05D005513 1.8e-07 60.8 76 47.4
arahy.Tifrunner.gnm1.ann1.SI7QTZ Arachis hypogaea HOM05D004496 ORTHO05D005513 1.8e-07 60.8 76 50.0
Nn1g01506 Nelumbo nucifera HOM05D004496 ORTHO05D005513 2.3e-07 60.5 96 43.8
Sabra11G0008600 Salix brachista HOM05D004496 ORTHO05D005513 3.0e-07 60.1 272 28.7
Sabra11G0010200 Salix brachista HOM05D004496 ORTHO05D005513 3.0e-07 60.1 272 28.7
Aa31LG6G4310 Aethionema arabicum HOM05D004496 ORTHO05D005513 4.0e-07 59.7 69 53.6
Manes.16G002700 Manihot esculenta HOM05D004496 ORTHO05D005513 5.2e-07 59.3 242 30.2
ATR0059G030 Amborella trichopoda HOM05D004496 ORTHO05D005513 6.8e-07 58.9 108 44.4
CsaV3_6G048690 Cucumis sativus L. HOM05D004496 ORTHO05D005513 1.5e-06 57.8 103 38.8
Gohir.A05G173300 Gossypium hirsutum HOM05D004496 ORTHO05D005513 2.0e-06 57.4 176 31.2
Sp7g20330 Schrenkiella parvula HOM05D004496 ORTHO05D005513 2.0e-06 57.4 183 33.3
Duzib192G0344 Durio zibethinus HOM05D004496 ORTHO05D005513 2.6e-06 57.0 333 26.4
HanXRQChr15g0470781 Helianthus annuus HOM05D004496 ORTHO05D005513 2.6e-06 57.0 66 48.5
EL10Ac8g20132 Beta vulgaris HOM05D004496 ORTHO05D005513 3.4e-06 56.6 169 34.3
THA.LOC104813445 Tarenaya hassleriana HOM05D004496 ORTHO05D005513 3.4e-06 56.6 123 36.6
Sp6g04650 Schrenkiella parvula HOM05D004496 ORTHO05D005513 5.7e-06 55.8 244 29.9
TAR627G0966 Trochodendron aralioides HOM05D004496 ORTHO05D005513 7.5e-06 55.5 89 44.9
Gohir.A06G151400 Gossypium hirsutum HOM05D004496 ORTHO05D005513 9.8e-06 55.1 67 50.7


User provided reference genes

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