Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g7475 Utricularia gibba HOM05D007092 ORTHO05D008947 2.6e-191 671.8 319 100.0
Migut.I01177 Erythranthe guttata HOM05D007092 ORTHO05D008947 1.8e-91 340.1 260 63.8
Cc04_g00380 Coffea canephora HOM05D007092 ORTHO05D008947 1.8e-86 323.6 257 63.4
Dinv37796 Davidia involucrata HOM05D007092 ORTHO05D008947 4.3e-85 318.9 298 55.0
QL05p083231 Quercus lobata HOM05D007092 ORTHO05D008947 5.7e-85 318.5 306 55.9
SalBow6G0042 Salvia bowleyana HOM05D007092 ORTHO05D008947 9.7e-85 317.8 322 50.9
Oeu049655.1 Olea europaea HOM05D007092 ORTHO05D008947 4.8e-84 315.5 260 57.7
CSS0038887 Camellia sinensis var. sinensis HOM05D007092 ORTHO05D008947 6.9e-83 311.6 277 54.9
Actinidia21869 Actinidia chinensis HOM05D007092 ORTHO05D008947 2.0e-82 310.1 279 55.2
CANSAT01G0482 Cannabis sativa HOM05D007092 ORTHO05D008947 5.9e-82 308.5 250 60.0
Lsat_1_v5_gn_5_137421 Lactuca sativa HOM05D007092 ORTHO05D008947 5.9e-82 308.5 260 60.0
Nitab4.5_0008628g0030 Nicotiana tabacum HOM05D007092 ORTHO05D008947 7.7e-82 308.1 253 58.5
AUR62025584 Chenopodium quinoa HOM05D007092 ORTHO05D008947 1.7e-81 307.0 273 57.1
Prupe.3G167100 Prunus persica HOM05D007092 ORTHO05D008947 1.7e-81 307.0 265 58.5
Eucgr.F04011 Eucalyptus grandis HOM05D007092 ORTHO05D008947 2.9e-81 306.2 305 52.5
HanXRQChr10g0311491 Helianthus annuus HOM05D007092 ORTHO05D008947 3.8e-81 305.8 251 59.4
Sc12g0010950 Simmondsia chinensis HOM05D007092 ORTHO05D008947 3.8e-81 305.8 272 57.0
EL10Ac7g18225 Beta vulgaris HOM05D007092 ORTHO05D008947 5.0e-81 305.4 265 57.0
MD09G1158700 Malus domestica HOM05D007092 ORTHO05D008947 6.5e-81 305.1 257 58.0
Nitab4.5_0002661g0010 Nicotiana tabacum HOM05D007092 ORTHO05D008947 6.5e-81 305.1 251 58.6
GSVIVG01016136001 Vitis vinifera HOM05D007092 ORTHO05D008947 6.5e-81 305.1 266 56.8
Hma1.2p1_1104F.1_g257360 Hydrangea macrophylla HOM05D007092 ORTHO05D008947 1.1e-80 304.3 264 57.2
VMungo0647G0167 Vigna mungo HOM05D007092 ORTHO05D008947 2.5e-80 303.1 299 52.2
Nn2g12583 Nelumbo nucifera HOM05D007092 ORTHO05D008947 4.2e-80 302.4 264 57.6
Solyc06g063230.3 Solanum lycopersicum HOM05D007092 ORTHO05D008947 1.2e-79 300.8 256 57.0
RcHm_v2.0_Chr2g0150121 Rosa chinensis HOM05D007092 ORTHO05D008947 1.6e-79 300.4 253 58.5
Sopen06g022680 Solanum pennellii HOM05D007092 ORTHO05D008947 1.6e-79 300.4 256 57.0
Thecc.06G015800 Theobroma cacao HOM05D007092 ORTHO05D008947 1.6e-79 300.4 254 58.7
PGR102G2093 Punica granatum HOM05D007092 ORTHO05D008947 2.7e-79 299.7 254 59.1
ECA234G1665 Erigeron canadensis HOM05D007092 ORTHO05D008947 1.4e-78 297.4 248 58.1
PGSC0003DMG400026517 Solanum tuberosum HOM05D007092 ORTHO05D008947 1.4e-78 297.4 252 56.3
Ciclev10026125m.g Citrus clementina HOM05D007092 ORTHO05D008947 1.8e-78 297.0 299 50.8
FvH4_6g37290 Fragaria vesca HOM05D007092 ORTHO05D008947 1.8e-78 297.0 253 57.3
Atru.chr1.2779 Acer truncatum HOM05D007092 ORTHO05D008947 2.3e-78 296.6 251 57.0
PSO063G1240 Papaver somniferum HOM05D007092 ORTHO05D008947 1.1e-77 294.3 251 57.4
TAR383G0306 Trochodendron aralioides HOM05D007092 ORTHO05D008947 4.3e-77 292.4 249 57.0
ATR0580G293 Amborella trichopoda HOM05D007092 ORTHO05D008947 5.7e-77 292.0 291 51.5
FAN02G1258 Fragaria x ananassa HOM05D007092 ORTHO05D008947 7.4e-77 291.6 288 51.4
TPR.G38753 Trifolium pratense HOM05D007092 ORTHO05D008947 1.3e-76 290.8 304 48.4
arahy.Tifrunner.gnm1.ann1.U4SUAB Arachis hypogaea HOM05D007092 ORTHO05D008947 4.8e-76 288.9 266 54.5
Peaxi162Scf00207g01537 Petunia axillaris HOM05D007092 ORTHO05D008947 6.3e-76 288.5 279 52.3
arahy.Tifrunner.gnm1.ann1.2I6Q5Y Arachis hypogaea HOM05D007092 ORTHO05D008947 1.1e-75 287.7 266 54.5
Phvul.008G255700 Phaseolus vulgaris HOM05D007092 ORTHO05D008947 1.8e-75 287.0 248 55.6
Aa31LG4G3360 Aethionema arabicum HOM05D007092 ORTHO05D008947 3.1e-75 286.2 257 54.1
Duzib160G0445 Durio zibethinus HOM05D007092 ORTHO05D008947 4.1e-75 285.8 256 54.7
Glyma.07G003900 Glycine max HOM05D007092 ORTHO05D008947 4.1e-75 285.8 264 54.5
Thhalv10018923m.g Eutrema salsugineum HOM05D007092 ORTHO05D008947 6.9e-75 285.0 254 53.9
Manes.01G181400 Manihot esculenta HOM05D007092 ORTHO05D008947 1.2e-74 284.3 277 51.3
CsaV3_7G033820 Cucumis sativus L. HOM05D007092 ORTHO05D008947 3.4e-74 282.7 251 55.4
AL2G32840 Arabidopsis lyrata HOM05D007092 ORTHO05D008947 7.7e-74 281.6 279 50.2
Ca_20954_v3 Cicer arietinum L. HOM05D007092 ORTHO05D008947 1.3e-73 280.8 277 51.6
Lj3g0013116 Lotus japonicus HOM05D007092 ORTHO05D008947 1.3e-73 280.8 265 53.2
ClCG09G001510 Citrullus lanatus HOM05D007092 ORTHO05D008947 2.2e-73 280.0 268 53.4
Medtr4g006030 Medicago truncatula HOM05D007092 ORTHO05D008947 2.2e-73 280.0 284 51.1
AT1G73090 Arabidopsis thaliana HOM05D007092 ORTHO05D008947 3.8e-73 279.3 255 53.3
Carub.0002s1986 Capsella rubella HOM05D007092 ORTHO05D008947 3.8e-73 279.3 253 53.4
Lalb_Chr04g0264731 Lupinus albus HOM05D007092 ORTHO05D008947 5.0e-73 278.9 252 54.8
CARHR066060 Cardamine hirsuta HOM05D007092 ORTHO05D008947 1.4e-72 277.3 253 53.4
Hund18612 Selenicereus undatus HOM05D007092 ORTHO05D008947 1.9e-72 276.9 272 53.7
Haze_15817 Corylus avellana HOM05D007092 ORTHO05D008947 9.4e-72 274.6 271 55.7
Sp5g28050 Schrenkiella parvula HOM05D007092 ORTHO05D008947 2.1e-71 273.5 255 52.2
Gohir.D10G007300 Gossypium hirsutum HOM05D007092 ORTHO05D008947 2.7e-71 273.1 232 54.7
A02p18440 Brassica napus HOM05D007092 ORTHO05D008947 3.6e-71 272.7 256 52.0
BraA02t06883Z Brassica rapa HOM05D007092 ORTHO05D008947 3.6e-71 272.7 256 52.0
Gohir.A10G007400 Gossypium hirsutum HOM05D007092 ORTHO05D008947 6.1e-71 271.9 232 55.2
Gorai.011G008000 Gossypium raimondii HOM05D007092 ORTHO05D008947 6.1e-71 271.9 232 54.3
Aqoxy7G03199 Aquilegia oxysepala HOM05D007092 ORTHO05D008947 7.9e-71 271.6 306 48.7
Lj6C21G9 Lonicera japonica HOM05D007092 ORTHO05D008947 7.9e-71 271.6 246 54.9
BolC2t09103H Brassica oleracea HOM05D007092 ORTHO05D008947 8.8e-70 268.1 256 51.6
AUR62001368 Chenopodium quinoa HOM05D007092 ORTHO05D008947 2.6e-69 266.5 245 54.3
C02p30520 Brassica napus HOM05D007092 ORTHO05D008947 9.7e-69 264.6 256 51.6
Sed0004999 Sechium edule HOM05D007092 ORTHO05D008947 1.3e-68 264.2 231 56.3
HPP92_017449 Vanilla planifolia HOM05D007092 ORTHO05D008947 4.8e-68 262.3 258 50.0
THA.LOC104823333 Tarenaya hassleriana HOM05D007092 ORTHO05D008947 8.2e-68 261.5 242 54.5
Potri.010G250100 Populus trichocarpa HOM05D007092 ORTHO05D008947 1.4e-67 260.8 262 53.1
Sabra10G0194500 Salix brachista HOM05D007092 ORTHO05D008947 1.4e-67 260.8 252 54.4
COL.COLO4_22872 Corchorus olitorius HOM05D007092 ORTHO05D008947 2.0e-66 256.9 234 53.8
MBI14_g30703_MAGBIO Magnolia biondii HOM05D007092 ORTHO05D008947 4.5e-66 255.8 294 49.7
MELO3C024294.2 Cucumis melo HOM05D007092 ORTHO05D008947 3.8e-65 252.7 246 52.4
SGA_v2.0_scaffold122G33289 Striga asiatica HOM05D002895 ORTHO05D003286 5.0e-65 252.3 271 50.9
Lj6C3G1 Lonicera japonica HOM05D000076 ORTHO05D001279 7.7e-58 228.4 220 52.7
arahy.Tifrunner.gnm1.ann1.65RD4S Arachis hypogaea HOM05D007092 ORTHO05D008947 4.4e-53 212.6 213 52.1
CDE07G2035 Ceratophyllum demersum HOM05D007092 ORTHO05D008947 5.0e-49 199.1 307 39.7
Hund18613 Selenicereus undatus HOM05D007092 ORTHO05D008947 1.7e-44 184.1 182 49.5
Mapoly0073s0046 Marchantia polymorpha HOM05D007092 ORTHO05D008947 3.1e-43 179.9 247 39.3
FAN09G2007 Fragaria x ananassa HOM05D007092 ORTHO05D008947 5.2e-38 162.5 120 62.5
AagrBONN_evm.TU.Sc2ySwM_344.2112 Anthoceros agrestis HOM05D007092 ORTHO05D008947 2.2e-36 157.1 296 35.1
SMO230G0107 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 6.4e-36 155.6 239 39.3
arahy.Tifrunner.gnm1.ann1.NXC5E0 Arachis hypogaea HOM05D007092 ORTHO05D008947 4.6e-34 149.4 116 56.9
Psat7g263560 Pisum sativum HOM05D007092 ORTHO05D008947 4.6e-34 149.4 180 42.8
Cfa021192 Carpinus fangiana HOM05D007092 ORTHO05D008947 3.0e-33 146.7 111 62.2
Pp3c13_10570 Physcomitrium patens HOM05D007092 ORTHO05D008947 3.9e-33 146.4 267 34.1
C02p30540 Brassica napus HOM05D007092 ORTHO05D008947 3.4e-29 133.3 92 60.9
arahy.Tifrunner.gnm1.ann1.DEI7NY Arachis hypogaea HOM05D007092 ORTHO05D008947 1.4e-27 127.9 79 67.1
RcHm_v2.0_Chr1g0381181 Rosa chinensis HOM05D007092 ORTHO05D008947 8.6e-25 118.6 122 52.5
Glyma.08G222700 Glycine max HOM05D007092 ORTHO05D008947 1.5e-24 117.9 79 64.6
SMO336G0036 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 1.9e-24 117.5 267 30.7
SEGI_20536 Sequoiadendron giganteum HOM05D007092 ORTHO05D008947 2.3e-22 110.5 78 64.1
Lj6A3T47 Lonicera japonica HOM05D007092 ORTHO05D008947 2.6e-21 107.1 67 73.1
arahy.Tifrunner.gnm1.ann1.BLVE7G Arachis hypogaea HOM05D007092 ORTHO05D008947 1.2e-13 81.6 48 66.7
arahy.Tifrunner.gnm1.ann1.LQFB73 Arachis hypogaea HOM05D007092 ORTHO05D008947 1.2e-13 81.6 48 66.7
arahy.Tifrunner.gnm1.ann1.QYJ7WZ Arachis hypogaea HOM05D007092 ORTHO05D008947 1.2e-13 81.6 72 59.7
arahy.Tifrunner.gnm1.ann1.TPQB3Q Arachis hypogaea HOM05D007092 ORTHO05D008947 1.2e-13 81.6 72 59.7
Cpa.g.sc1009.2 Carica papaya HOM05D007092 ORTHO05D008947 1.4e-11 74.7 72 48.6
BcaC07g40307 Brassica carinata HOM05D007092 ORTHO05D008947 1.6e-10 71.2 63 50.8
arahy.Tifrunner.gnm1.ann1.KBSP04 Arachis hypogaea HOM05D002221 ORTHO05D002626 3.3e-08 63.5 46 56.5
arahy.Tifrunner.gnm1.ann1.R6H1XR Arachis hypogaea HOM05D002221 ORTHO05D002626 3.3e-08 63.5 46 56.5
Actinidia38794 Actinidia chinensis HOM05D007092 ORTHO05D008947 4.3e-08 63.2 41 65.9
arahy.Tifrunner.gnm1.ann1.AT2CXE Arachis hypogaea HOM05D007092 ORTHO05D008947 1.4e-06 58.2 42 57.1


User provided reference genes

Program Settings