Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g7470 Utricularia gibba HOM05D001216 ORTHO05D003822 1.1e-63 246.5 133 100.0
SalBow6G2735 Salvia bowleyana HOM05D001216 ORTHO05D003822 3.2e-42 175.3 131 73.3
SalBow6G3972 Salvia bowleyana HOM05D001216 ORTHO05D003822 3.2e-42 175.3 131 73.3
Migut.I01081 Erythranthe guttata HOM05D001216 ORTHO05D003822 1.3e-38 163.3 131 68.7
MSTRG.10950 Avicennia marina HOM05D001216 ORTHO05D003822 2.2e-38 162.5 131 67.9
SalBow7G2863 Salvia bowleyana HOM05D001216 ORTHO05D003822 9.1e-37 157.1 131 68.7
SGA_v2.0_scaffold71G23848 Striga asiatica HOM05D001216 ORTHO05D003822 7.7e-36 154.1 131 65.6
MSTRG.22546 Avicennia marina HOM05D001216 ORTHO05D003822 1.5e-34 149.8 133 64.7
Oeu000414.1 Olea europaea HOM05D001216 ORTHO05D003822 2.6e-31 139.0 134 63.4
Migut.D00935 Erythranthe guttata HOM05D001216 ORTHO05D003822 7.5e-31 137.5 131 61.1
MSTRG.9522 Avicennia marina HOM05D001216 ORTHO05D003822 2.8e-30 135.6 125 64.8
SGA_v2.0_scaffold122G33340 Striga asiatica HOM05D001216 ORTHO05D003822 7.0e-29 131.0 131 63.4
Dinv20429 Davidia involucrata HOM05D001216 ORTHO05D003822 9.1e-29 130.6 140 62.1
Dinv37864 Davidia involucrata HOM05D001216 ORTHO05D003822 6.5e-27 124.4 140 60.7
Solyc03g123370.3 Solanum lycopersicum HOM05D001216 ORTHO05D003822 1.6e-25 119.8 137 56.9
Sopen03g041150 Solanum pennellii HOM05D001216 ORTHO05D003822 2.1e-25 119.4 137 56.9
PGSC0003DMG400014030 Solanum tuberosum HOM05D001216 ORTHO05D003822 2.1e-25 119.4 137 56.9
unitig_32.g11561 Utricularia gibba HOM05D001216 ORTHO05D003822 1.0e-24 117.1 72 90.3
Nitab4.5_0004422g0050 Nicotiana tabacum HOM05D001216 ORTHO05D003822 1.5e-23 113.2 137 59.1
CSS0035701 Camellia sinensis var. sinensis HOM05D001216 ORTHO05D003822 5.7e-23 111.3 137 57.7
Nitab4.5_0007255g0010 Nicotiana tabacum HOM05D001216 ORTHO05D003822 9.8e-23 110.5 137 55.5
Peaxi162Scf00038g02114 Petunia axillaris HOM05D001216 ORTHO05D003822 9.8e-23 110.5 133 57.1
Prupe.3G039700 Prunus persica HOM05D001216 ORTHO05D003822 1.7e-22 109.8 145 53.8
Lj9A524T49 Lonicera japonica HOM05D001216 ORTHO05D003822 2.2e-22 109.4 141 55.3
PGR102G0760 Punica granatum HOM05D001216 ORTHO05D003822 2.8e-22 109.0 140 57.1
CANSAT13G0001 Cannabis sativa HOM05D001216 ORTHO05D003822 3.7e-22 108.6 139 52.5
CANSAT56G1565 Cannabis sativa HOM05D001216 ORTHO05D003822 3.7e-22 108.6 139 52.5
Oeu026246.1 Olea europaea HOM05D001216 ORTHO05D003822 4.8e-22 108.2 131 54.2
Eucgr.F04408 Eucalyptus grandis HOM05D001216 ORTHO05D003822 6.3e-22 107.8 143 57.3
TAR383G0104 Trochodendron aralioides HOM05D001216 ORTHO05D003822 1.1e-21 107.1 142 57.0
CAN.G668.43 Capsicum annuum HOM05D001216 ORTHO05D003822 1.4e-21 106.7 139 54.0
Cc04_g01270 Coffea canephora HOM05D001216 ORTHO05D003822 5.4e-21 104.8 133 57.1
Manes.11G019500 Manihot esculenta HOM05D001216 ORTHO05D003822 1.2e-20 103.6 125 57.6
THA.LOC104815622 Tarenaya hassleriana HOM05D001216 ORTHO05D003822 1.2e-20 103.6 123 60.2
MD09G1181600 Malus domestica HOM05D001216 ORTHO05D003822 1.6e-20 103.2 146 51.4
Manes.04G145500 Manihot esculenta HOM05D001216 ORTHO05D003822 1.6e-20 103.2 123 57.7
Nn8g38635 Nelumbo nucifera HOM05D001216 ORTHO05D003822 3.5e-20 102.1 142 55.6
Aa31LG8G1240 Aethionema arabicum HOM05D001216 ORTHO05D003822 4.5e-20 101.7 121 56.2
Sed0012851 Sechium edule HOM05D001216 ORTHO05D003822 1.7e-19 99.8 140 54.3
Cfa003528 Carpinus fangiana HOM05D001216 ORTHO05D003822 2.9e-19 99.0 143 51.7
ClCG09G001000 Citrullus lanatus HOM05D001216 ORTHO05D003822 2.9e-19 99.0 141 53.2
MELO3C024351.2 Cucumis melo HOM05D001216 ORTHO05D003822 2.9e-19 99.0 141 53.2
Haze_16037 Corylus avellana HOM05D001216 ORTHO05D003822 5.0e-19 98.2 143 51.0
CsaV3_7G034440 Cucumis sativus L. HOM05D001216 ORTHO05D003822 1.1e-18 97.1 140 53.6
Actinidia21793 Actinidia chinensis HOM05D001216 ORTHO05D003822 1.5e-18 96.7 138 54.3
CiPaw.01G218200 Carya illinoinensis HOM05D001216 ORTHO05D003822 2.5e-18 95.9 143 52.4
Actinidia32192 Actinidia chinensis HOM05D001216 ORTHO05D003822 1.2e-17 93.6 139 51.8
Potri.003G066000 Populus trichocarpa HOM05D001216 ORTHO05D003822 2.1e-17 92.8 125 52.0
CARHR044480 Cardamine hirsuta HOM05D001216 ORTHO05D003822 2.8e-17 92.4 123 55.3
Thhalv10011285m.g Eutrema salsugineum HOM05D001216 ORTHO05D003822 3.6e-17 92.0 137 53.3
Lj9A532T69 Lonicera japonica HOM05D001216 ORTHO05D003822 4.7e-17 91.7 111 55.0
Eucgr.J02809 Eucalyptus grandis HOM05D001216 ORTHO05D003822 6.1e-17 91.3 132 49.2
Hma1.2p1_0686F.1_g203400 Hydrangea macrophylla HOM05D001216 ORTHO05D003822 6.1e-17 91.3 133 54.1
Gohir.D10G055500 Gossypium hirsutum HOM05D001216 ORTHO05D003822 8.0e-17 90.9 137 50.4
Gorai.011G059200 Gossypium raimondii HOM05D001216 ORTHO05D003822 8.0e-17 90.9 137 50.4
THA.LOC104810369 Tarenaya hassleriana HOM05D001216 ORTHO05D003822 8.0e-17 90.9 126 54.8
Aa31LG10G1280 Aethionema arabicum HOM05D001216 ORTHO05D003822 1.0e-16 90.5 124 52.4
Thecc.06G121200 Theobroma cacao HOM05D001216 ORTHO05D003822 1.4e-16 90.1 134 50.7
TPR.G13810 Trifolium pratense HOM05D001216 ORTHO05D003822 2.3e-16 89.4 125 53.6
Ciclev10024989m.g Citrus clementina HOM05D001216 ORTHO05D003822 4.0e-16 88.6 139 49.6
Gohir.A10G053700 Gossypium hirsutum HOM05D001216 ORTHO05D003822 4.0e-16 88.6 137 49.6
MD17G1168000 Malus domestica HOM05D001216 ORTHO05D003822 4.0e-16 88.6 143 49.0
RcHm_v2.0_Chr2g0145751 Rosa chinensis HOM05D001216 ORTHO05D003822 5.2e-16 88.2 139 47.5
Sp1g40580 Schrenkiella parvula HOM05D001216 ORTHO05D003822 6.8e-16 87.8 140 50.7
ATR0598G350 Amborella trichopoda HOM05D001216 ORTHO05D003822 8.9e-16 87.4 134 49.3
Sabra03G0038600 Salix brachista HOM05D001216 ORTHO05D003822 8.9e-16 87.4 125 50.4
CiPaw.02G135500 Carya illinoinensis HOM05D001216 ORTHO05D003822 1.2e-15 87.0 127 51.2
AT1G54130 Arabidopsis thaliana HOM05D001216 ORTHO05D003822 1.5e-15 86.7 138 51.4
Sabra01G0142400 Salix brachista HOM05D001216 ORTHO05D003822 1.5e-15 86.7 123 52.0
AL1G62850 Arabidopsis lyrata HOM05D001216 ORTHO05D003822 2.0e-15 86.3 138 50.7
Duzib235G0768 Durio zibethinus HOM05D001216 ORTHO05D003822 2.0e-15 86.3 135 47.4
AT3G14050 Arabidopsis thaliana HOM05D001216 ORTHO05D003822 2.6e-15 85.9 125 53.6
TWI31G1175 Tripterygium wilfordii HOM05D001216 ORTHO05D003822 2.6e-15 85.9 142 50.0
Aqoxy7G04059 Aquilegia oxysepala HOM05D001216 ORTHO05D003822 3.4e-15 85.5 136 54.4
FAN02G1741 Fragaria x ananassa HOM05D001216 ORTHO05D003822 3.4e-15 85.5 137 46.7
Glyma.16G008400 Glycine max HOM05D001216 ORTHO05D003822 3.4e-15 85.5 143 49.0
FAN09G3390 Fragaria x ananassa HOM05D001216 ORTHO05D003822 4.4e-15 85.1 137 46.7
Actinidia26025 Actinidia chinensis HOM05D001216 ORTHO05D003822 5.7e-15 84.7 120 55.0
CsaV3_3G031310 Cucumis sativus L. HOM05D001216 ORTHO05D003822 5.7e-15 84.7 144 47.9
CsaV3_UNG227950 Cucumis sativus L. HOM05D001216 ORTHO05D003822 5.7e-15 84.7 144 47.9
FAN05G2062 Fragaria x ananassa HOM05D001216 ORTHO05D003822 5.7e-15 84.7 137 46.7
Atru.chr1.3998 Acer truncatum HOM05D001216 ORTHO05D003822 9.8e-15 84.0 144 48.6
Phvul.010G129100 Phaseolus vulgaris HOM05D001216 ORTHO05D003822 9.8e-15 84.0 137 50.4
FvH4_6g34880 Fragaria vesca HOM05D001216 ORTHO05D003822 1.3e-14 83.6 132 46.2
FAN14G5102 Fragaria x ananassa HOM05D001216 ORTHO05D003822 1.3e-14 83.6 132 46.2
Glyma.07G039600 Glycine max HOM05D001216 ORTHO05D003822 1.7e-14 83.2 134 47.8
COL.COLO4_30748 Corchorus olitorius HOM05D001216 ORTHO05D003822 2.2e-14 82.8 134 47.0
VMungo0331G0428 Vigna mungo HOM05D001216 ORTHO05D003822 3.7e-14 82.0 140 50.7
Potri.001G168200 Populus trichocarpa HOM05D001216 ORTHO05D003822 4.9e-14 81.6 125 49.6
Gohir.D05G142300 Gossypium hirsutum HOM05D001216 ORTHO05D003822 6.3e-14 81.3 118 49.2
Gorai.009G146300 Gossypium raimondii HOM05D001216 ORTHO05D003822 6.3e-14 81.3 118 49.2
Gohir.A05G140000 Gossypium hirsutum HOM05D001216 ORTHO05D003822 8.3e-14 80.9 119 51.3
Sp3g12290 Schrenkiella parvula HOM05D001216 ORTHO05D003822 8.3e-14 80.9 121 52.9
Thhalv10020161m.g Eutrema salsugineum HOM05D001216 ORTHO05D003822 1.8e-13 79.7 122 51.6
Sed0005494 Sechium edule HOM05D001216 ORTHO05D003822 1.8e-13 79.7 141 46.8
Carub.0001s4337 Capsella rubella HOM05D001216 ORTHO05D003822 3.2e-13 79.0 139 46.8
arahy.Tifrunner.gnm1.ann1.SCHH8V Arachis hypogaea HOM05D001216 ORTHO05D003822 5.4e-13 78.2 141 48.2
arahy.Tifrunner.gnm1.ann1.SZLU9V Arachis hypogaea HOM05D001216 ORTHO05D003822 5.4e-13 78.2 141 48.2
CARHR088880 Cardamine hirsuta HOM05D001216 ORTHO05D003822 1.6e-12 76.6 127 51.2
AL3G26250 Arabidopsis lyrata HOM05D001216 ORTHO05D003822 2.0e-12 76.3 126 50.0
Duzib160G0167 Durio zibethinus HOM05D001216 ORTHO05D003822 2.0e-12 76.3 134 46.3
Lalb_Chr04g0263551 Lupinus albus HOM05D001216 ORTHO05D003822 2.7e-12 75.9 141 48.2
ClCG07G014120 Citrullus lanatus HOM05D001216 ORTHO05D003822 3.5e-12 75.5 144 43.8
BcaB02g10860 Brassica carinata HOM05D001216 ORTHO05D003822 4.5e-12 75.1 124 51.6
Lj3g0021321 Lotus japonicus HOM05D001216 ORTHO05D003822 4.5e-12 75.1 135 47.4
vmacro15040 Vaccinium macrocarpon HOM05D001216 ORTHO05D003822 4.5e-12 75.1 134 47.8
CSS0007713 Camellia sinensis var. sinensis HOM05D001216 ORTHO05D003822 5.9e-12 74.7 132 47.7
Lj5A36T82 Lonicera japonica HOM05D001216 ORTHO05D003822 1.0e-11 73.9 118 50.0
BolC6t36753H Brassica oleracea HOM05D001216 ORTHO05D003822 1.7e-11 73.2 141 47.5
C06p15660 Brassica napus HOM05D001216 ORTHO05D003822 2.3e-11 72.8 125 48.8
Lalb_Chr25g0281501 Lupinus albus HOM05D001216 ORTHO05D003822 2.3e-11 72.8 129 45.7
BcaB07g33262 Brassica carinata HOM05D001216 ORTHO05D003822 3.9e-11 72.0 129 51.2
Ca_23389_v3 Cicer arietinum L. HOM05D001216 ORTHO05D003822 6.6e-11 71.2 123 50.4
Carub.0003s1364 Capsella rubella HOM05D001216 ORTHO05D003822 8.6e-11 70.9 124 50.0
Medtr8g020880 Medicago truncatula HOM05D001216 ORTHO05D003822 8.6e-11 70.9 133 42.9
BcaC08g44164 Brassica carinata HOM05D001216 ORTHO05D003822 2.5e-10 69.3 143 46.2
Sc15g0000390 Simmondsia chinensis HOM05D001216 ORTHO05D003822 3.3e-10 68.9 140 43.6
HanXRQChr09g0276921 Helianthus annuus HOM05D001216 ORTHO05D003822 9.5e-10 67.4 132 43.2
EL10Ac7g16415 Beta vulgaris HOM05D001216 ORTHO05D003822 2.1e-09 66.2 140 47.9
Hund18688 Selenicereus undatus HOM05D001216 ORTHO05D003822 2.1e-09 66.2 131 45.8
vmacro22037 Vaccinium macrocarpon HOM05D001216 ORTHO05D003822 4.7e-09 65.1 112 46.4
BcaC08g43593 Brassica carinata HOM05D001216 ORTHO05D003822 1.4e-08 63.5 123 48.0
C06p09910 Brassica napus HOM05D001216 ORTHO05D003822 1.4e-08 63.5 123 48.0
BolC6t36063H Brassica oleracea HOM05D001216 ORTHO05D003822 1.4e-08 63.5 123 48.0
Psat4g177600 Pisum sativum HOM05D001216 ORTHO05D003822 1.4e-08 63.5 136 44.1
Hund05735 Selenicereus undatus HOM05D001216 ORTHO05D003822 3.1e-08 62.4 132 47.7
BcaC05g29127 Brassica carinata HOM05D001216 ORTHO05D003822 5.2e-08 61.6 127 45.7
C05p53580 Brassica napus HOM05D001216 ORTHO05D003822 5.2e-08 61.6 127 45.7
BolC5t34035H Brassica oleracea HOM05D001216 ORTHO05D003822 5.2e-08 61.6 127 45.7
QL05p004201 Quercus lobata HOM05D001216 ORTHO05D003822 6.8e-08 61.2 131 44.3
Cpa.g.sc589.3 Carica papaya HOM05D001216 ORTHO05D003822 8.9e-08 60.8 144 38.9
Rhsim12G0210000 Rhododendron simsii HOM05D001216 ORTHO05D003822 8.9e-08 60.8 129 42.6
HPP92_016606 Vanilla planifolia HOM05D001216 ORTHO05D003822 2.6e-07 59.3 141 44.0
HPP92_009226 Vanilla planifolia HOM05D001216 ORTHO05D003822 5.8e-07 58.2 131 38.9
Zm00001eb040400 Zea mays HOM05D001216 ORTHO05D003822 2.2e-06 56.2 141 36.2


User provided reference genes

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