Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g7378 Utricularia gibba HOM05D003524 ORTHO05D003988 1.2e-52 209.5 103 100.0
unitig_32.g11664 Utricularia gibba HOM05D006934 ORTHO05D008743 1.2e-31 139.8 88 76.1
Migut.A00356 Erythranthe guttata HOM05D003524 ORTHO05D003988 2.0e-31 139.0 97 67.0
Oeu009646.1 Olea europaea HOM05D003524 ORTHO05D003988 3.4e-31 138.3 97 67.0
SGA_v2.0_scaffold22G09905 Striga asiatica HOM05D003524 ORTHO05D003988 5.8e-31 137.5 97 68.0
SalBow4G2912 Salvia bowleyana HOM05D003524 ORTHO05D003988 1.9e-29 132.5 96 67.7
Haze_21415 Corylus avellana HOM05D003524 ORTHO05D003988 1.6e-28 129.4 100 64.0
Haze_21413 Corylus avellana HOM05D003524 ORTHO05D003988 6.0e-28 127.5 99 62.6
Solyc08g006800.3 Solanum lycopersicum HOM05D003524 ORTHO05D003988 1.3e-27 126.3 100 61.0
CAN.G353.11 Capsicum annuum HOM05D003524 ORTHO05D003988 2.3e-27 125.6 100 61.0
ClCG05G016230 Citrullus lanatus HOM05D003524 ORTHO05D003988 3.9e-27 124.8 99 60.6
Eucgr.L02917 Eucalyptus grandis HOM05D003524 ORTHO05D003988 3.9e-27 124.8 94 63.8
Nitab4.5_0002011g0040 Nicotiana tabacum HOM05D003524 ORTHO05D003988 3.9e-27 124.8 97 63.9
Cfa013050 Carpinus fangiana HOM05D003524 ORTHO05D003988 5.1e-27 124.4 97 61.9
CSS0001588 Camellia sinensis var. sinensis HOM05D003524 ORTHO05D003988 1.1e-26 123.2 103 61.2
MELO3C016955.2 Cucumis melo HOM05D003524 ORTHO05D003988 1.5e-26 122.9 100 60.0
DCAR_022861 Daucus carota HOM05D003524 ORTHO05D003988 1.9e-26 122.5 89 66.3
TWI34G0563 Tripterygium wilfordii HOM05D003524 ORTHO05D003988 1.9e-26 122.5 97 59.8
CsaV3_4G036500 Cucumis sativus L. HOM05D003524 ORTHO05D003988 2.5e-26 122.1 100 60.0
CiPaw.07G230500 Carya illinoinensis HOM05D003524 ORTHO05D003988 3.3e-26 121.7 100 60.0
Eucgr.C02607 Eucalyptus grandis HOM05D003524 ORTHO05D003988 3.3e-26 121.7 94 63.8
Sopen08g002750 Solanum pennellii HOM05D003524 ORTHO05D003988 3.3e-26 121.7 91 62.6
BolC1t00701H Brassica oleracea HOM05D003524 ORTHO05D003988 4.3e-26 121.3 100 61.0
Atru.chr7.2561 Acer truncatum HOM05D003524 ORTHO05D003988 5.6e-26 120.9 97 61.9
Gohir.A05G059800 Gossypium hirsutum HOM05D003524 ORTHO05D003988 5.6e-26 120.9 96 61.5
CANSAT25G3000 Cannabis sativa HOM05D003524 ORTHO05D003988 7.3e-26 120.6 97 60.8
Cc08_g07120 Coffea canephora HOM05D003524 ORTHO05D003988 7.3e-26 120.6 98 59.2
Thhalv10026655m.g Eutrema salsugineum HOM05D003524 ORTHO05D003988 7.3e-26 120.6 94 61.7
PGSC0003DMG400026298 Solanum tuberosum HOM05D003524 ORTHO05D003988 9.5e-26 120.2 91 62.6
A01p06450 Brassica napus HOM05D003524 ORTHO05D003988 1.2e-25 119.8 94 61.7
C01p07090 Brassica napus HOM05D003524 ORTHO05D003988 1.2e-25 119.8 94 61.7
BraA01t00606Z Brassica rapa HOM05D003524 ORTHO05D003988 1.2e-25 119.8 94 61.7
Gohir.D05G062000 Gossypium hirsutum HOM05D003524 ORTHO05D003988 1.6e-25 119.4 97 60.8
Gorai.009G063100 Gossypium raimondii HOM05D003524 ORTHO05D003988 1.6e-25 119.4 97 60.8
Peaxi162Scf00045g02028 Petunia axillaris HOM05D003524 ORTHO05D003988 1.6e-25 119.4 97 59.8
PGR044G0872 Punica granatum HOM05D003524 ORTHO05D003988 1.6e-25 119.4 97 59.8
HanXRQChr09g0274741 Helianthus annuus HOM05D003524 ORTHO05D003988 2.1e-25 119.0 98 58.2
RcHm_v2.0_Chr6g0299391 Rosa chinensis HOM05D003524 ORTHO05D003988 2.1e-25 119.0 95 60.0
Aa31LG2G18400 Aethionema arabicum HOM05D003524 ORTHO05D003988 2.8e-25 118.6 99 59.6
Sp7g29640 Schrenkiella parvula HOM05D003524 ORTHO05D003988 2.8e-25 118.6 94 60.6
THA.LOC104803862 Tarenaya hassleriana HOM05D003524 ORTHO05D003988 3.6e-25 118.2 104 56.7
BcaB03g12722 Brassica carinata HOM05D003524 ORTHO05D003988 4.7e-25 117.9 94 59.6
BcaC01g01055 Brassica carinata HOM05D003524 ORTHO05D003988 4.7e-25 117.9 94 60.6
A08p18430 Brassica napus HOM05D003524 ORTHO05D003988 4.7e-25 117.9 94 60.6
C03p87500 Brassica napus HOM05D003524 ORTHO05D003988 4.7e-25 117.9 94 60.6
BolC3t21069H Brassica oleracea HOM05D003524 ORTHO05D003988 4.7e-25 117.9 94 60.6
Lsat_1_v5_gn_4_88160 Lactuca sativa HOM05D003361 ORTHO05D003988 6.2e-25 117.5 102 57.8
AT4G31830 Arabidopsis thaliana HOM05D003524 ORTHO05D003988 1.1e-24 116.7 97 58.8
CARHR239750 Cardamine hirsuta HOM05D003524 ORTHO05D003988 1.1e-24 116.7 94 60.6
BcaC09g51975 Brassica carinata HOM05D003524 ORTHO05D003988 1.4e-24 116.3 94 60.6
Carub.0007s0872 Capsella rubella HOM05D003524 ORTHO05D003988 1.4e-24 116.3 97 59.8
ECA232G2703 Erigeron canadensis HOM05D003524 ORTHO05D003988 1.4e-24 116.3 101 55.4
MD08G1056200 Malus domestica HOM05D003524 ORTHO05D003988 1.4e-24 116.3 97 60.8
MD15G1040800 Malus domestica HOM05D003524 ORTHO05D003988 1.4e-24 116.3 97 60.8
Lalb_Chr14g0361751 Lupinus albus HOM05D003524 ORTHO05D003988 1.8e-24 115.9 97 57.7
PSO339G2253 Papaver somniferum HOM05D003524 ORTHO05D003988 1.8e-24 115.9 102 53.9
AL7G20150 Arabidopsis lyrata HOM05D003524 ORTHO05D003988 2.4e-24 115.5 97 57.7
Actinidia22287 Actinidia chinensis HOM05D000091 ORTHO05D003988 3.1e-24 115.2 96 58.3
Medtr1g014110 Medicago truncatula HOM05D003524 ORTHO05D003988 3.1e-24 115.2 105 56.2
TAR383G0003 Trochodendron aralioides HOM05D003524 ORTHO05D003988 3.1e-24 115.2 100 56.0
Nn8g39910 Nelumbo nucifera HOM05D003524 ORTHO05D003988 4.0e-24 114.8 97 57.7
QL02p018819 Quercus lobata HOM05D003524 ORTHO05D003988 4.0e-24 114.8 96 58.3
Aqoxy7G03391 Aquilegia oxysepala HOM05D003524 ORTHO05D003988 6.8e-24 114.0 98 55.1
COL.COLO4_18953 Corchorus olitorius HOM05D003524 ORTHO05D003988 6.8e-24 114.0 97 58.8
FAN27G2394 Fragaria x ananassa HOM05D003524 ORTHO05D003988 8.9e-24 113.6 96 57.3
Cc08_g07080 Coffea canephora HOM05D003524 ORTHO05D003988 1.2e-23 113.2 97 57.7
Cc08_g07090 Coffea canephora HOM05D003524 ORTHO05D003988 1.2e-23 113.2 97 57.7
Lj5g0009668 Lotus japonicus HOM05D003524 ORTHO05D003988 1.2e-23 113.2 104 56.7
Rhsim02G0212800 Rhododendron simsii HOM05D003524 ORTHO05D003988 1.5e-23 112.8 95 57.9
Lj1g0009607 Lotus japonicus HOM05D003524 ORTHO05D003988 2.0e-23 112.5 106 54.7
Manes.03G008400 Manihot esculenta HOM05D003524 ORTHO05D003988 2.6e-23 112.1 97 57.7
TPR.G38873 Trifolium pratense HOM05D003524 ORTHO05D003988 2.6e-23 112.1 100 58.0
Lj5g0020130 Lotus japonicus HOM05D003524 ORTHO05D003988 4.4e-23 111.3 106 57.5
Ca_13066_v3 Cicer arietinum L. HOM05D003524 ORTHO05D003988 7.6e-23 110.5 100 56.0
Potri.018G018300 Populus trichocarpa HOM05D003524 ORTHO05D003988 7.6e-23 110.5 99 60.6
GSVIVG01035971001 Vitis vinifera HOM05D003524 ORTHO05D003988 7.6e-23 110.5 96 57.3
BcaNung03115 Brassica carinata HOM05D003524 ORTHO05D003988 1.7e-22 109.4 94 59.6
FAN20G2483 Fragaria x ananassa HOM05D003524 ORTHO05D003988 8.4e-22 107.1 96 54.2
Cpa.g.sc127.42 Carica papaya HOM05D003524 ORTHO05D003988 1.1e-21 106.7 94 53.2
Prupe.1G394000 Prunus persica HOM05D003524 ORTHO05D003988 1.1e-21 106.7 97 56.7
BraA08t33803Z Brassica rapa HOM05D003524 ORTHO05D003988 4.2e-21 104.8 86 58.1
Manes.16G130000 Manihot esculenta HOM05D003524 ORTHO05D003988 6.0e-20 100.9 89 53.9
arahy.Tifrunner.gnm1.ann1.PTAL7S Arachis hypogaea HOM05D003524 ORTHO05D003988 1.0e-19 100.1 97 51.5
arahy.Tifrunner.gnm1.ann1.ZW8IXI Arachis hypogaea HOM05D003524 ORTHO05D003988 1.0e-19 100.1 97 51.5
BcaC01g01054 Brassica carinata HOM05D003524 ORTHO05D003988 1.3e-19 99.8 80 60.0
Psat6g025880 Pisum sativum HOM05D003524 ORTHO05D003988 1.7e-19 99.4 100 50.0
Sed0019715 Sechium edule HOM05D003524 ORTHO05D003988 1.4e-16 89.7 99 49.5
Os09g0127700 Oryza sativa ssp. japonica HOM05D003524 ORTHO05D003988 2.4e-16 89.0 97 51.5
EL10Ac2g02500 Beta vulgaris HOM05D003524 ORTHO05D003988 3.1e-16 88.6 105 47.6
Duzib168G0976 Durio zibethinus HOM05D003524 ORTHO05D003988 3.1e-16 88.6 84 56.0
FAN15G0945 Fragaria x ananassa HOM05D003524 ORTHO05D003988 3.4e-15 85.1 72 55.6
Zm00001eb095580 Zea mays HOM05D003524 ORTHO05D003988 4.4e-15 84.7 97 49.5
AUR62024806 Chenopodium quinoa HOM05D003524 ORTHO05D003988 7.6e-15 84.0 94 48.9
Ah.12g060790 Amaranthus hybridus HOM05D003524 ORTHO05D003988 9.9e-15 83.6 104 44.2
Haze_19201 Corylus avellana HOM05D003524 ORTHO05D003988 1.3e-14 83.2 83 51.8
TAR625G1231 Trochodendron aralioides HOM05D003524 ORTHO05D003988 1.7e-14 82.8 97 49.5
Glyma.17G223300 Glycine max HOM05D003524 ORTHO05D003988 6.4e-14 80.9 100 43.0
Phvul.001G041500 Phaseolus vulgaris HOM05D003524 ORTHO05D003988 1.1e-13 80.1 87 48.3
Cfa020822 Carpinus fangiana HOM05D003524 ORTHO05D003988 7.1e-13 77.4 83 48.2
Sc08g0005190 Simmondsia chinensis HOM05D003524 ORTHO05D003988 7.1e-13 77.4 77 50.6
Sc08g0005200 Simmondsia chinensis HOM05D003524 ORTHO05D003988 7.1e-13 77.4 77 50.6
CiPaw.03G202100 Carya illinoinensis HOM05D003524 ORTHO05D003988 2.1e-12 75.9 85 49.4
SHI21076 Sapria himalayana HOM05D003524 ORTHO05D003988 4.6e-12 74.7 78 47.4
Glyma.14G101900 Glycine max HOM05D003524 ORTHO05D003988 6.0e-12 74.3 86 43.0
Rhsim03G0257300 Rhododendron simsii HOM05D000122 ORTHO05D000139 7.8e-12 73.9 70 57.1
vmacro06076 Vaccinium macrocarpon HOM05D003524 ORTHO05D003988 1.3e-11 73.2 89 48.3
MSTRG.6141 Avicennia marina HOM05D003524 ORTHO05D003988 1.7e-11 72.8 105 42.9
AUR62029823 Chenopodium quinoa HOM05D003524 ORTHO05D003988 6.6e-11 70.9 63 54.0
Migut.K00320 Erythranthe guttata HOM05D003524 ORTHO05D003988 6.6e-11 70.9 106 43.4
ClCG06G012430 Citrullus lanatus HOM05D003524 ORTHO05D003988 1.1e-10 70.1 75 49.3
QL02p093340 Quercus lobata HOM05D003524 ORTHO05D003988 1.1e-10 70.1 68 52.9
Lalb_Chr08g0234291 Lupinus albus HOM05D003524 ORTHO05D003988 2.5e-10 68.9 76 47.4
Nitab4.5_0002011g0090 Nicotiana tabacum HOM05D003524 ORTHO05D003988 3.3e-10 68.6 60 46.7
Lalb_Chr11g0072661 Lupinus albus HOM05D003524 ORTHO05D003988 5.6e-10 67.8 67 50.7
Nitab4.5_0002947g0020 Nicotiana tabacum HOM05D003524 ORTHO05D003988 1.3e-09 66.6 47 66.0
MELO3C010217.2 Cucumis melo HOM05D003524 ORTHO05D003988 1.6e-09 66.2 81 42.0
Sopen07g001680 Solanum pennellii HOM05D003524 ORTHO05D003988 1.6e-09 66.2 70 50.0
PGSC0003DMG401011138 Solanum tuberosum HOM05D003524 ORTHO05D003988 2.1e-09 65.9 61 54.1
Nitab4.5_0003563g0040 Nicotiana tabacum HOM05D003524 ORTHO05D003988 3.6e-09 65.1 62 43.5
Psat0s2403g0200 Pisum sativum HOM05D003524 ORTHO05D003988 3.6e-09 65.1 61 54.1
arahy.Tifrunner.gnm1.ann1.YXTM1W Arachis hypogaea HOM05D003524 ORTHO05D003988 4.8e-09 64.7 61 55.7
ECA240G1327 Erigeron canadensis HOM05D003524 ORTHO05D003988 4.8e-09 64.7 62 56.5
arahy.Tifrunner.gnm1.ann1.36ASSY Arachis hypogaea HOM05D003524 ORTHO05D003988 6.2e-09 64.3 101 38.6
Phvul.003G155700 Phaseolus vulgaris HOM05D003524 ORTHO05D003988 6.2e-09 64.3 61 55.7
Prupe.7G263500 Prunus persica HOM05D003524 ORTHO05D003988 6.2e-09 64.3 86 46.5
Sed0002480 Sechium edule HOM05D003524 ORTHO05D003988 6.2e-09 64.3 85 44.7
AagrBONN_evm.TU.Sc2ySwM_368.420 Anthoceros agrestis HOM05D003524 ORTHO05D003988 8.1e-09 63.9 46 65.2
Ca_21130_v3 Cicer arietinum L. HOM05D003524 ORTHO05D003988 8.1e-09 63.9 61 52.5
Ca_28168_v3 Cicer arietinum L. HOM05D003524 ORTHO05D003988 8.1e-09 63.9 61 52.5
Medtr4g130810 Medicago truncatula HOM05D003524 ORTHO05D003988 8.1e-09 63.9 61 52.5
MBI15_g18244_MAGBIO Magnolia biondii HOM05D003524 ORTHO05D003988 1.1e-08 63.5 87 40.2
Sabra06G0139800 Salix brachista HOM05D003524 ORTHO05D003988 1.1e-08 63.5 59 55.9
EL10Ac4g10348 Beta vulgaris HOM05D003524 ORTHO05D003988 1.4e-08 63.2 66 51.5
CSS0041430 Camellia sinensis var. sinensis HOM05D003524 ORTHO05D003988 1.4e-08 63.2 70 50.0
Ciclev10010389m.g Citrus clementina HOM05D003524 ORTHO05D003988 1.4e-08 63.2 61 55.7
SalBow1G7165 Salvia bowleyana HOM05D003524 ORTHO05D003988 1.8e-08 62.8 61 52.5
Cpa.g.sc46.161 Carica papaya HOM05D000332 ORTHO05D000268 2.4e-08 62.4 61 54.1
COL.COLO4_18813 Corchorus olitorius HOM05D003524 ORTHO05D003988 2.4e-08 62.4 60 58.3
TPR.G24858 Trifolium pratense HOM05D003524 ORTHO05D003988 2.4e-08 62.4 61 50.8
Atru.chr7.178 Acer truncatum HOM05D003524 ORTHO05D003988 4.0e-08 61.6 61 52.5
Lsat_1_v5_gn_7_49941 Lactuca sativa HOM05D003524 ORTHO05D003988 4.0e-08 61.6 64 53.1
Oeu021302.1 Olea europaea HOM05D003524 ORTHO05D003988 4.0e-08 61.6 77 46.8
Glyma.02G204400 Glycine max HOM05D003524 ORTHO05D003988 5.3e-08 61.2 70 47.1
Cpa.g.sc136.44 Carica papaya HOM05D003524 ORTHO05D003988 6.9e-08 60.8 61 52.5
Cc06_g14890 Coffea canephora HOM05D003524 ORTHO05D003988 6.9e-08 60.8 59 50.8
MD15G1144300 Malus domestica HOM05D003524 ORTHO05D003988 6.9e-08 60.8 70 45.7
Potri.006G183800 Populus trichocarpa HOM05D003524 ORTHO05D003988 6.9e-08 60.8 61 50.8
FAN23G1251 Fragaria x ananassa HOM05D003524 ORTHO05D003988 1.2e-07 60.1 86 43.0
FAN26G0389 Fragaria x ananassa HOM05D003524 ORTHO05D003988 1.2e-07 60.1 86 43.0
Prupe.1G394100 Prunus persica HOM05D003524 ORTHO05D003988 1.2e-07 60.1 89 38.2
Hma1.2p1_0028F.1_g017600 Hydrangea macrophylla HOM05D003524 ORTHO05D003988 1.5e-07 59.7 64 45.3
FAN28G2066 Fragaria x ananassa HOM05D003524 ORTHO05D003988 2.6e-07 58.9 86 41.9
BcaB01g02731 Brassica carinata HOM05D003524 ORTHO05D003988 4.5e-07 58.2 62 53.2
Gohir.D05G054800 Gossypium hirsutum HOM05D003524 ORTHO05D003988 4.5e-07 58.2 59 55.9
BcaC01g04654 Brassica carinata HOM05D003524 ORTHO05D003988 5.8e-07 57.8 62 53.2
C03p35250 Brassica napus HOM05D003524 ORTHO05D003988 5.8e-07 57.8 62 53.2
BolC3t15837H Brassica oleracea HOM05D003524 ORTHO05D003988 5.8e-07 57.8 62 53.2
Dinv42850 Davidia involucrata HOM05D003524 ORTHO05D003988 5.8e-07 57.8 80 41.2
Dinv43250 Davidia involucrata HOM05D003524 ORTHO05D003988 5.8e-07 57.8 80 41.2
Potri.018G106300 Populus trichocarpa HOM05D003524 ORTHO05D003988 7.6e-07 57.4 61 49.2
Eucgr.C00343 Eucalyptus grandis HOM05D003524 ORTHO05D003988 9.9e-07 57.0 62 51.6
BcaB01g01557 Brassica carinata HOM05D003524 ORTHO05D003988 1.3e-06 56.6 62 53.2
AL6G44970 Arabidopsis lyrata HOM05D003524 ORTHO05D003988 1.7e-06 56.2 45 64.4
A09p28280 Brassica napus HOM05D003524 ORTHO05D003988 2.2e-06 55.8 62 51.6
BraA09t38397Z Brassica rapa HOM05D003524 ORTHO05D003988 2.2e-06 55.8 62 51.6
Nitab4.5_0006523g0040 Nicotiana tabacum HOM05D003524 ORTHO05D003988 2.2e-06 55.8 61 49.2
Thecc.09G029400 Theobroma cacao HOM05D003524 ORTHO05D003988 2.2e-06 55.8 59 50.8
BcaC04g21087 Brassica carinata HOM05D003524 ORTHO05D003988 2.9e-06 55.5 62 51.6
A03p29240 Brassica napus HOM05D003524 ORTHO05D003988 2.9e-06 55.5 62 51.6
C09p35850 Brassica napus HOM05D003524 ORTHO05D003988 2.9e-06 55.5 62 51.6
BolC9t56418H Brassica oleracea HOM05D003524 ORTHO05D003988 2.9e-06 55.5 62 51.6
BraA03t12119Z Brassica rapa HOM05D003524 ORTHO05D003988 2.9e-06 55.5 62 51.6
BcaC03g16382 Brassica carinata HOM05D003524 ORTHO05D003988 3.8e-06 55.1 62 51.6
A02p26460 Brassica napus HOM05D003524 ORTHO05D003988 3.8e-06 55.1 62 51.6
C02p42080 Brassica napus HOM05D003524 ORTHO05D003988 3.8e-06 55.1 62 51.6
BolC2t10246H Brassica oleracea HOM05D003524 ORTHO05D003988 3.8e-06 55.1 62 51.6
BraA02t07649Z Brassica rapa HOM05D003524 ORTHO05D003988 3.8e-06 55.1 62 51.6
Thhalv10029345m.g Eutrema salsugineum HOM05D003524 ORTHO05D003988 3.8e-06 55.1 62 51.6
Gohir.A05G053200 Gossypium hirsutum HOM05D003524 ORTHO05D003988 3.8e-06 55.1 46 58.7
Mapoly0006s0148 Marchantia polymorpha HOM05D003524 ORTHO05D003988 3.8e-06 55.1 67 49.3
Sp6g06610 Schrenkiella parvula HOM05D003524 ORTHO05D003988 3.8e-06 55.1 62 51.6
SGA_v2.0_scaffold12G06006 Striga asiatica HOM05D003524 ORTHO05D003988 3.8e-06 55.1 79 43.0
BcaB05g23874 Brassica carinata HOM05D003524 ORTHO05D003988 4.9e-06 54.7 62 51.6
Gorai.009G056500 Gossypium raimondii HOM05D003524 ORTHO05D003988 4.9e-06 54.7 46 60.9
CARHR255710 Cardamine hirsuta HOM05D003524 ORTHO05D003988 6.4e-06 54.3 62 50.0
Carub.0006s2963 Capsella rubella HOM05D003524 ORTHO05D003988 8.4e-06 53.9 62 50.0
CAN.G353.10 Capsicum annuum HOM05D003524 ORTHO05D003988 8.4e-06 53.9 60 53.3


User provided reference genes

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