Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g7255 Utricularia gibba HOM05D000141 ORTHO05D004489 4.6e-36 154.1 79 100.0
SalBow5G4210 Salvia bowleyana HOM05D000141 ORTHO05D004489 1.2e-15 86.3 61 72.1
MSTRG.3653 Avicennia marina HOM05D000141 ORTHO05D004489 1.7e-14 82.4 61 70.5
Migut.K01161 Erythranthe guttata HOM05D000141 ORTHO05D004489 2.2e-14 82.0 61 70.5
Oeu004295.1 Olea europaea HOM05D000141 ORTHO05D004489 8.4e-14 80.1 61 67.2
Oeu025038.1 Olea europaea HOM05D000141 ORTHO05D004489 2.7e-12 75.1 57 68.4
PGSC0003DMG400009428 Solanum tuberosum HOM05D000141 ORTHO05D004489 1.8e-11 72.4 62 66.1
CAN.G883.8 Capsicum annuum HOM05D000141 ORTHO05D004489 5.1e-11 70.9 62 64.5
Solyc02g068340.3 Solanum lycopersicum HOM05D000141 ORTHO05D004489 5.1e-11 70.9 62 64.5
Sopen02g017470 Solanum pennellii HOM05D000141 ORTHO05D004489 5.1e-11 70.9 62 64.5
SGA_v2.0_scaffold45G17090 Striga asiatica HOM05D000141 ORTHO05D004489 5.1e-11 70.9 61 62.3
Nitab4.5_0017516g0010 Nicotiana tabacum HOM05D000141 ORTHO05D004489 1.5e-10 69.3 62 62.9
Nitab4.5_0028853g0010 Nicotiana tabacum HOM05D000141 ORTHO05D004489 3.3e-10 68.2 62 61.3
Hma1.2p1_0085F.1_g044180 Hydrangea macrophylla HOM05D000141 ORTHO05D004489 5.6e-10 67.4 57 59.6
SGA_v2.0_scaffold229G43289 Striga asiatica HOM05D000141 ORTHO05D004489 7.4e-10 67.0 57 63.2
GSVIVG01026414001 Vitis vinifera HOM05D000141 ORTHO05D004489 8.1e-09 63.5 65 55.4
Cc07_g12380 Coffea canephora HOM05D000141 ORTHO05D004489 1.4e-08 62.8 65 56.9
Dinv19108 Davidia involucrata HOM05D000141 ORTHO05D004489 1.4e-08 62.8 57 57.9
Dinv28284 Davidia involucrata HOM05D000141 ORTHO05D004489 1.4e-08 62.8 57 57.9
Peaxi162Scf00981g00112 Petunia axillaris HOM05D000141 ORTHO05D004489 1.8e-08 62.4 63 60.3
Lj2C507G14 Lonicera japonica HOM05D000141 ORTHO05D004489 4.0e-08 61.2 53 64.2
CiPaw.08G183100 Carya illinoinensis HOM05D000141 ORTHO05D004489 6.9e-08 60.5 58 55.2
CSS0002075 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D004489 1.2e-07 59.7 56 55.4
DCAR_000973 Daucus carota HOM05D000141 ORTHO05D004489 1.2e-07 59.7 63 58.7
ECA238G3829 Erigeron canadensis HOM05D000141 ORTHO05D004489 1.3e-06 56.2 59 55.9
Ciclev10024719m.g Citrus clementina HOM05D000141 ORTHO05D004489 2.2e-06 55.5 66 48.5
Gohir.D03G000600 Gossypium hirsutum HOM05D000141 ORTHO05D004489 2.2e-06 55.5 59 52.5
Gorai.003G001000 Gossypium raimondii HOM05D000141 ORTHO05D004489 2.2e-06 55.5 59 52.5
HanXRQChr14g0443671 Helianthus annuus HOM05D000141 ORTHO05D004489 2.2e-06 55.5 50 58.0
arahy.Tifrunner.gnm1.ann1.C6YA57 Arachis hypogaea HOM05D000141 ORTHO05D004489 2.9e-06 55.1 62 54.8
TAR381G1317 Trochodendron aralioides HOM05D000141 ORTHO05D004489 2.9e-06 55.1 57 59.6
VMungo1215G2882 Vigna mungo HOM05D000141 ORTHO05D004489 2.9e-06 55.1 66 50.0
Glyma.01G155300 Glycine max HOM05D000141 ORTHO05D004489 4.9e-06 54.3 45 64.4
arahy.Tifrunner.gnm1.ann1.SMPN38 Arachis hypogaea HOM05D000141 ORTHO05D004489 6.4e-06 53.9 62 50.0
Gohir.A02G179100 Gossypium hirsutum HOM05D000141 ORTHO05D004489 8.4e-06 53.5 59 50.8
Phvul.002G120200 Phaseolus vulgaris HOM05D000141 ORTHO05D004489 8.4e-06 53.5 66 50.0


User provided reference genes

Program Settings