Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g7237 Utricularia gibba HOM05D007341 ORTHO05D009075 7.5e-80 300.4 149 100.0
Migut.K00075 Erythranthe guttata HOM05D007341 ORTHO05D009075 1.5e-51 206.5 157 68.8
MSTRG.26115 Avicennia marina HOM05D007341 ORTHO05D009075 9.5e-51 203.8 154 68.8
SGA_v2.0_scaffold94G28462 Striga asiatica HOM05D007341 ORTHO05D009075 7.0e-46 187.6 151 64.9
Cc06_g16890 Coffea canephora HOM05D007341 ORTHO05D009075 3.7e-39 165.2 143 62.2
Haze_16246 Corylus avellana HOM05D007341 ORTHO05D009075 6.4e-39 164.5 149 61.1
Sopen10g035850 Solanum pennellii HOM05D007341 ORTHO05D009075 8.3e-39 164.1 141 58.2
CiPaw.01G092200 Carya illinoinensis HOM05D007341 ORTHO05D009075 1.1e-38 163.7 125 72.0
Thecc.06G049400 Theobroma cacao HOM05D007341 ORTHO05D009075 1.1e-38 163.7 145 62.1
Solyc10g086470.2 Solanum lycopersicum HOM05D007341 ORTHO05D009075 1.4e-38 163.3 141 58.2
Nitab4.5_0000349g0220 Nicotiana tabacum HOM05D007341 ORTHO05D009075 1.9e-38 162.9 114 70.2
Gorai.009G121500 Gossypium raimondii HOM05D007341 ORTHO05D009075 2.4e-38 162.5 125 69.6
Duzib235G0177 Durio zibethinus HOM05D007341 ORTHO05D009075 4.1e-38 161.8 125 67.2
Gohir.A05G116700 Gossypium hirsutum HOM05D007341 ORTHO05D009075 4.1e-38 161.8 125 69.6
Gohir.D05G117600 Gossypium hirsutum HOM05D007341 ORTHO05D009075 4.1e-38 161.8 125 68.8
GSVIVG01029444001 Vitis vinifera HOM05D007341 ORTHO05D009075 4.1e-38 161.8 97 81.4
Sabra07G0002700 Salix brachista HOM05D007341 ORTHO05D009075 5.4e-38 161.4 126 68.3
TWI12G0959 Tripterygium wilfordii HOM05D007341 ORTHO05D009075 5.4e-38 161.4 121 70.2
Dinv20313 Davidia involucrata HOM05D007341 ORTHO05D009075 7.1e-38 161.0 129 65.9
Sed0003722 Sechium edule HOM05D007341 ORTHO05D009075 7.1e-38 161.0 96 79.2
MELO3C019561.2 Cucumis melo HOM05D007341 ORTHO05D009075 9.2e-38 160.6 101 76.2
CsaV3_3G018050 Cucumis sativus L. HOM05D007341 ORTHO05D009075 9.2e-38 160.6 96 79.2
Ciclev10029418m.g Citrus clementina HOM05D007341 ORTHO05D009075 1.2e-37 160.2 103 75.7
DCAR_027600 Daucus carota HOM05D007341 ORTHO05D009075 1.2e-37 160.2 125 64.8
QL05p085130 Quercus lobata HOM05D007341 ORTHO05D009075 1.6e-37 159.8 130 64.6
Hma1.2p1_0422F.1_g150100 Hydrangea macrophylla HOM05D007341 ORTHO05D009075 2.1e-37 159.5 123 64.2
PGSC0003DMG400019203 Solanum tuberosum HOM05D007341 ORTHO05D009075 2.1e-37 159.5 139 60.4
Cfa002160 Carpinus fangiana HOM05D007341 ORTHO05D009075 3.5e-37 158.7 140 62.9
THA.LOC104808109 Tarenaya hassleriana HOM05D007341 ORTHO05D009075 6.0e-37 157.9 129 64.3
CSS0015626 Camellia sinensis var. sinensis HOM05D007341 ORTHO05D009075 7.8e-37 157.5 124 64.5
Prupe.3G028000 Prunus persica HOM05D007341 ORTHO05D009075 7.8e-37 157.5 147 60.5
Eucgr.F04060 Eucalyptus grandis HOM05D007341 ORTHO05D009075 1.7e-36 156.4 120 68.3
PGR102G3137 Punica granatum HOM05D007341 ORTHO05D009075 2.3e-36 156.0 126 67.5
RcHm_v2.0_Chr2g0148351 Rosa chinensis HOM05D007341 ORTHO05D009075 1.9e-35 152.9 97 75.3
ECA240G2002 Erigeron canadensis HOM05D007341 ORTHO05D009075 2.5e-35 152.5 144 61.1
HanXRQChr03g0072101 Helianthus annuus HOM05D007341 ORTHO05D009075 2.5e-35 152.5 98 76.5
FvH4_6g36350 Fragaria vesca HOM05D007341 ORTHO05D009075 5.6e-35 151.4 125 64.8
FAN02G2832 Fragaria x ananassa HOM05D007341 ORTHO05D009075 5.6e-35 151.4 125 64.8
Potri.007G003600 Populus trichocarpa HOM05D007341 ORTHO05D009075 5.6e-35 151.4 126 65.1
MD09G1169800 Malus domestica HOM05D007341 ORTHO05D009075 7.3e-35 151.0 104 71.2
Lsat_1_v5_gn_9_114620 Lactuca sativa HOM05D007341 ORTHO05D009075 1.2e-34 150.2 154 57.1
Medtr6g004140 Medicago truncatula HOM05D007341 ORTHO05D009075 1.2e-34 150.2 143 55.9
FAN09G2851 Fragaria x ananassa HOM05D007341 ORTHO05D009075 3.6e-34 148.7 138 58.0
TAR636G1203 Trochodendron aralioides HOM05D007341 ORTHO05D009075 6.2e-34 147.9 116 67.2
CANSAT01G1666 Cannabis sativa HOM05D007341 ORTHO05D009075 1.1e-33 147.1 97 72.2
SalBow1G8719 Salvia bowleyana HOM05D007341 ORTHO05D009075 4.0e-33 145.2 142 56.3
AUR62001305 Chenopodium quinoa HOM05D007341 ORTHO05D009075 6.8e-33 144.4 119 60.5
Glyma.15G000400 Glycine max HOM05D007341 ORTHO05D009075 6.8e-33 144.4 139 57.6
AUR62025687 Chenopodium quinoa HOM05D007341 ORTHO05D009075 8.9e-33 144.1 119 59.7
HPP92_026441 Vanilla planifolia HOM05D007341 ORTHO05D009075 2.6e-32 142.5 110 64.5
BcaC08g45393 Brassica carinata HOM05D007341 ORTHO05D009075 4.4e-32 141.7 145 55.9
C06p30240 Brassica napus HOM05D007341 ORTHO05D009075 4.4e-32 141.7 145 55.9
BolC6t38187H Brassica oleracea HOM05D007341 ORTHO05D009075 4.4e-32 141.7 145 55.9
Phvul.005G082000 Phaseolus vulgaris HOM05D007341 ORTHO05D009075 5.8e-32 141.4 139 56.8
LjContig00482g0010930 Lotus japonicus HOM05D007341 ORTHO05D009075 9.9e-32 140.6 131 60.3
EL10Ac7g18105 Beta vulgaris HOM05D007341 ORTHO05D009075 2.2e-31 139.4 118 57.6
CARHR072660 Cardamine hirsuta HOM05D007341 ORTHO05D009075 2.2e-31 139.4 145 55.9
Actinidia38822 Actinidia chinensis HOM05D007341 ORTHO05D009075 2.9e-31 139.0 132 59.8
A07p27380 Brassica napus HOM05D007341 ORTHO05D009075 3.8e-31 138.7 145 55.2
BraA07t30379Z Brassica rapa HOM05D007341 ORTHO05D009075 3.8e-31 138.7 145 55.2
Pp3c15_22740 Physcomitrium patens HOM05D007341 ORTHO05D009075 4.9e-31 138.3 137 53.3
SalBow1G7986 Salvia bowleyana HOM05D007341 ORTHO05D009075 4.9e-31 138.3 119 60.5
Carub.0002s2586 Capsella rubella HOM05D007341 ORTHO05D009075 6.4e-31 137.9 143 52.4
Thhalv10019269m.g Eutrema salsugineum HOM05D007341 ORTHO05D009075 6.4e-31 137.9 147 53.1
Hund18551 Selenicereus undatus HOM05D007341 ORTHO05D009075 6.4e-31 137.9 119 59.7
Sp5g34040 Schrenkiella parvula HOM05D007341 ORTHO05D009075 8.4e-31 137.5 150 54.0
AT1G78995 Arabidopsis thaliana HOM05D007341 ORTHO05D009075 1.1e-30 137.1 143 55.2
Mapoly0061s0126 Marchantia polymorpha HOM05D007341 ORTHO05D009075 1.1e-30 137.1 114 57.9
Aqoxy7G02561 Aquilegia oxysepala HOM05D007341 ORTHO05D009075 1.4e-30 136.7 144 54.9
BcaB02g07190 Brassica carinata HOM05D007341 ORTHO05D009075 3.2e-30 135.6 145 54.5
Zm00001eb227230 Zea mays HOM05D007341 ORTHO05D009075 3.2e-30 135.6 124 59.7
CDE05G1356 Ceratophyllum demersum HOM05D007341 ORTHO05D009075 2.7e-29 132.5 125 58.4
Lalb_Chr24g0392671 Lupinus albus HOM05D007341 ORTHO05D009075 3.5e-29 132.1 128 56.2
AL2G39450 Arabidopsis lyrata HOM05D007341 ORTHO05D009075 1.3e-28 130.2 146 52.7
PSO170G4447 Papaver somniferum HOM05D007341 ORTHO05D009075 1.3e-28 130.2 124 57.3
ATR0626G096 Amborella trichopoda HOM05D007341 ORTHO05D009075 1.7e-28 129.8 116 62.1
SMO232G0085 Selaginella moellendorffii HOM05D007341 ORTHO05D009075 2.3e-28 129.4 129 53.5
PSO063G2737 Papaver somniferum HOM05D007341 ORTHO05D009075 1.9e-27 126.3 124 54.8
Nitab4.5_0001911g0010 Nicotiana tabacum HOM05D007341 ORTHO05D009075 4.3e-27 125.2 131 55.7
Os06g0704200 Oryza sativa ssp. japonica HOM05D007341 ORTHO05D009075 5.6e-27 124.8 120 57.5
Oeu004021.1 Olea europaea HOM05D007341 ORTHO05D009075 1.2e-26 123.6 108 62.0
ClCG05G010440 Citrullus lanatus HOM05D007341 ORTHO05D009075 1.4e-25 120.2 82 73.2
Cpa.g.sc4293.1 Carica papaya HOM05D007341 ORTHO05D009075 5.2e-25 118.2 77 75.3
Sc16g0003760 Simmondsia chinensis HOM05D007341 ORTHO05D009075 9.0e-25 117.5 114 57.0
Nn8g41280 Nelumbo nucifera HOM05D007341 ORTHO05D009075 5.8e-24 114.8 111 58.6
VMungo1080G1509 Vigna mungo HOM05D007341 ORTHO05D009075 5.8e-24 114.8 105 59.0
FAN14G2925 Fragaria x ananassa HOM05D007341 ORTHO05D009075 6.4e-23 111.3 125 55.2
FAN14G4935 Fragaria x ananassa HOM05D007341 ORTHO05D009075 6.4e-23 111.3 125 55.2
DCAR_011722 Daucus carota HOM05D007341 ORTHO05D009075 1.4e-22 110.2 135 49.6
Sabra14G0002900 Salix brachista HOM05D007341 ORTHO05D009075 5.1e-20 101.7 79 62.0
C02p36120 Brassica napus HOM05D007341 ORTHO05D009075 1.9e-19 99.8 66 71.2
Cre01.g000800 Chlamydomonas reinhardtii HOM05D007341 ORTHO05D009075 1.9e-19 99.8 111 44.1
Manes.06G177800 Manihot esculenta HOM05D007341 ORTHO05D009075 8.1e-18 94.4 111 49.5
Peaxi162Scf00330g00029 Petunia axillaris HOM05D007341 ORTHO05D009075 4.0e-17 92.0 109 50.5
Rhsim08G0252300 Rhododendron simsii HOM05D000912 ORTHO05D009075 3.4e-16 89.0 93 55.9
vmacro18722 Vaccinium macrocarpon HOM05D007341 ORTHO05D009075 3.4e-16 89.0 98 54.1
Lj9A544T49 Lonicera japonica HOM05D007341 ORTHO05D009075 4.5e-16 88.6 68 67.6
MCO04G269 Micromonas commoda HOM05D007341 ORTHO05D009075 7.6e-16 87.8 119 42.0
Os02g0138100 Oryza sativa ssp. japonica HOM05D007341 ORTHO05D009075 4.9e-15 85.1 83 51.8
Aa31LG4G1990 Aethionema arabicum HOM05D007341 ORTHO05D009075 6.0e-13 78.2 102 50.0
Ah.08g218010 Amaranthus hybridus HOM05D007341 ORTHO05D009075 7.9e-13 77.8 114 44.7
PRCOL_00000561 Prasinoderma coloniale HOM05D007341 ORTHO05D009075 2.3e-12 76.3 94 40.4
Psat6g000680 Pisum sativum HOM05D007341 ORTHO05D009075 5.1e-12 75.1 119 44.5
AagrBONN_evm.TU.Sc2ySwM_368.1307 Anthoceros agrestis HOM05D007341 ORTHO05D009075 2.8e-10 69.3 100 44.0
MBI13_g34919_MAGBIO Magnolia biondii HOM05D007341 ORTHO05D009075 2.4e-09 66.2 81 53.1
Zm00001eb231900 Zea mays HOM05D007341 ORTHO05D009075 1.5e-08 63.5 117 35.9


User provided reference genes

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