Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g7198 Utricularia gibba HOM05D003759 ORTHO05D004149 2.2e-129 465.7 247 100.0
unitig_0.g2686 Utricularia gibba HOM05D003759 ORTHO05D004149 1.8e-54 216.9 267 53.6
SGA_v2.0_scaffold265G46100 Striga asiatica HOM05D003759 ORTHO05D004149 4.0e-30 136.0 297 37.0
Migut.K00316 Erythranthe guttata HOM05D003759 ORTHO05D004149 2.6e-29 133.3 233 42.9
MSTRG.6151 Avicennia marina HOM05D003759 ORTHO05D004149 8.4e-28 128.3 297 36.4
SGA_v2.0_scaffold45G17024 Striga asiatica HOM05D003759 ORTHO05D004149 3.5e-26 122.9 277 36.1
Migut.J01364 Erythranthe guttata HOM05D003759 ORTHO05D004149 3.0e-25 119.8 287 36.9
SalBow1G6739 Salvia bowleyana HOM05D003759 ORTHO05D004149 1.9e-24 117.1 301 35.2
SalBow1G3284 Salvia bowleyana HOM05D003759 ORTHO05D004149 2.8e-23 113.2 301 35.9
Nitab4.5_0002891g0100 Nicotiana tabacum HOM05D003759 ORTHO05D004149 1.1e-22 111.3 300 33.7
Nitab4.5_0008875g0010 Nicotiana tabacum HOM05D003759 ORTHO05D004149 6.9e-22 108.6 299 33.1
Oeu021304.1 Olea europaea HOM05D003759 ORTHO05D004149 1.4e-19 100.9 287 32.4
PGSC0003DMG400007832 Solanum tuberosum HOM05D003759 ORTHO05D004149 1.4e-19 100.9 285 33.0
Solyc12g009970.2 Solanum lycopersicum HOM05D003759 ORTHO05D004149 1.9e-19 100.5 291 30.2
PGR102G0437 Punica granatum HOM05D003759 ORTHO05D004149 4.6e-18 95.9 278 33.5
CAN.G551.47 Capsicum annuum HOM05D003759 ORTHO05D004149 6.0e-18 95.5 278 32.0
Sopen12g004840 Solanum pennellii HOM05D003759 ORTHO05D004149 6.0e-18 95.5 294 30.6
Oeu026461.3 Olea europaea HOM05D003759 ORTHO05D004149 1.8e-17 94.0 313 31.9
Cc06_g14820 Coffea canephora HOM05D003759 ORTHO05D004149 8.7e-17 91.7 324 30.9
HanXRQChr10g0313651 Helianthus annuus HOM05D003759 ORTHO05D004149 8.7e-17 91.7 227 32.2
ECA234G4063 Erigeron canadensis HOM05D003759 ORTHO05D004149 1.5e-16 90.9 237 32.1
HanXRQChr12g0357671 Helianthus annuus HOM05D003759 ORTHO05D004149 1.9e-16 90.5 240 32.9
Lalb_Chr08g0234281 Lupinus albus HOM05D003759 ORTHO05D004149 3.3e-16 89.7 243 33.3
Peaxi162Scf00062g00131 Petunia axillaris HOM05D003759 ORTHO05D004149 5.7e-16 89.0 295 29.8
TPR.G24855 Trifolium pratense HOM05D003759 ORTHO05D004149 7.4e-16 88.6 267 31.8
PGSC0003DMG400011142 Solanum tuberosum HOM05D003759 ORTHO05D004149 1.3e-15 87.8 285 31.2
Lj4g0026574 Lotus japonicus HOM05D003759 ORTHO05D004149 2.8e-15 86.7 277 30.7
CAN.G160.50 Capsicum annuum HOM05D003759 ORTHO05D004149 3.7e-15 86.3 283 31.1
Glyma.17G073100 Glycine max HOM05D003759 ORTHO05D004149 4.8e-15 85.9 262 30.5
Glyma.02G204900 Glycine max HOM05D003759 ORTHO05D004149 1.1e-14 84.7 267 31.1
VMungo1215G0492 Vigna mungo HOM05D003759 ORTHO05D004149 1.1e-14 84.7 265 30.2
Nitab4.5_0005869g0060 Nicotiana tabacum HOM05D003759 ORTHO05D004149 1.8e-14 84.0 284 29.9
Medtr4g130700 Medicago truncatula HOM05D003759 ORTHO05D004149 2.4e-14 83.6 274 29.2
Oeu028997.1 Olea europaea HOM05D003759 ORTHO05D004149 3.1e-14 83.2 212 35.4
CANSAT11G0712 Cannabis sativa HOM05D003759 ORTHO05D004149 4.1e-14 82.8 279 32.6
BcaB05g22386 Brassica carinata HOM05D003759 ORTHO05D004149 5.3e-14 82.4 234 29.1
C02p13760 Brassica napus HOM05D003759 ORTHO05D004149 5.3e-14 82.4 234 29.1
BolC2t07494H Brassica oleracea HOM05D003759 ORTHO05D004149 5.3e-14 82.4 234 29.1
DCAR_014806 Daucus carota HOM05D003759 ORTHO05D004149 5.3e-14 82.4 285 28.1
MBI15_g18234_MAGBIO Magnolia biondii HOM05D003759 ORTHO05D004149 1.5e-13 80.9 255 31.4
BcaB05g22385 Brassica carinata HOM05D003759 ORTHO05D004149 2.0e-13 80.5 230 30.4
Thhalv10014665m.g Eutrema salsugineum HOM05D003759 ORTHO05D004149 4.5e-13 79.3 254 32.3
Psat4g009880 Pisum sativum HOM05D003759 ORTHO05D004149 5.9e-13 79.0 265 29.4
Phvul.003G155300 Phaseolus vulgaris HOM05D003759 ORTHO05D004149 1.3e-12 77.8 265 30.2
A02p08110 Brassica napus HOM05D003759 ORTHO05D004149 5.0e-12 75.9 232 28.9
BolC3t13911H Brassica oleracea HOM05D003759 ORTHO05D004149 5.0e-12 75.9 231 30.7
BraA02t05884Z Brassica rapa HOM05D003759 ORTHO05D004149 5.0e-12 75.9 232 28.9
Nitab4.5_0001571g0070 Nicotiana tabacum HOM05D003759 ORTHO05D004149 5.0e-12 75.9 289 29.8
A03p12490 Brassica napus HOM05D003759 ORTHO05D004149 6.5e-12 75.5 231 30.3
Dinv43255 Davidia involucrata HOM05D003759 ORTHO05D004149 1.1e-11 74.7 270 29.6
THA.LOC104803918 Tarenaya hassleriana HOM05D003759 ORTHO05D004149 1.1e-11 74.7 242 31.0
A10p15270 Brassica napus HOM05D003759 ORTHO05D004149 1.9e-11 73.9 226 30.5
C03p14700 Brassica napus HOM05D003759 ORTHO05D004149 2.5e-11 73.6 231 30.3
Rhsim03G0257600 Rhododendron simsii HOM05D003759 ORTHO05D004149 2.5e-11 73.6 304 26.0
BraA10t43608Z Brassica rapa HOM05D003759 ORTHO05D004149 4.2e-11 72.8 226 30.1
AT5G57910 Arabidopsis thaliana HOM05D003759 ORTHO05D004149 5.5e-11 72.4 235 31.9
C09p49780 Brassica napus HOM05D003759 ORTHO05D004149 5.5e-11 72.4 233 30.9
Manes.06G035500 Manihot esculenta HOM05D003759 ORTHO05D004149 5.5e-11 72.4 271 28.0
Eucgr.C00252 Eucalyptus grandis HOM05D003759 ORTHO05D004149 9.3e-11 71.6 266 29.7
Phvul.009G204700 Phaseolus vulgaris HOM05D003759 ORTHO05D004149 9.3e-11 71.6 258 29.1
TAR625G0365 Trochodendron aralioides HOM05D003759 ORTHO05D004149 9.3e-11 71.6 238 29.4
HPP92_018342 Vanilla planifolia HOM05D003759 ORTHO05D004149 9.3e-11 71.6 235 28.5
VMungo1309G0866 Vigna mungo HOM05D003759 ORTHO05D004149 1.2e-10 71.2 271 30.3
BcaNung02973 Brassica carinata HOM05D003759 ORTHO05D004149 1.6e-10 70.9 233 32.6
Ca_21134_v3 Cicer arietinum L. HOM05D003759 ORTHO05D004149 2.7e-10 70.1 263 28.5
BolC9t57829H Brassica oleracea HOM05D003759 ORTHO05D004149 3.5e-10 69.7 233 29.2
Sopen07g001800 Solanum pennellii HOM05D003759 ORTHO05D004149 3.5e-10 69.7 302 27.8
THA.LOC104819991 Tarenaya hassleriana HOM05D003759 ORTHO05D004149 3.5e-10 69.7 252 27.4
vmacro06067 Vaccinium macrocarpon HOM05D003759 ORTHO05D004149 3.5e-10 69.7 306 26.5
A03p60150 Brassica napus HOM05D003759 ORTHO05D004149 6.1e-10 68.9 226 27.9
BraA03t15060Z Brassica rapa HOM05D003759 ORTHO05D004149 6.1e-10 68.9 226 27.9
Solyc07g005690.3 Solanum lycopersicum HOM05D003759 ORTHO05D004149 6.1e-10 68.9 292 28.1
HanXRQChr16g0511321 Helianthus annuus HOM05D003759 ORTHO05D004149 7.9e-10 68.6 93 44.1
ClCG02G014430 Citrullus lanatus HOM05D003759 ORTHO05D004149 1.0e-09 68.2 248 29.0
ClCG06G012480 Citrullus lanatus HOM05D003759 ORTHO05D004149 1.0e-09 68.2 271 27.3
Lalb_Chr12g0198751 Lupinus albus HOM05D003759 ORTHO05D004149 1.0e-09 68.2 258 27.5
Lsat_1_v5_gn_5_90100 Lactuca sativa HOM05D003759 ORTHO05D004149 1.3e-09 67.8 211 29.4
Ca_21136_v3 Cicer arietinum L. HOM05D003759 ORTHO05D004149 2.3e-09 67.0 242 28.1
Gohir.D08G273700 Gossypium hirsutum HOM05D003759 ORTHO05D004149 2.3e-09 67.0 245 28.2
Peaxi162Scf00401g00425 Petunia axillaris HOM05D003759 ORTHO05D004149 2.3e-09 67.0 256 29.3
BcaNung00572 Brassica carinata HOM05D003759 ORTHO05D004149 3.0e-09 66.6 231 29.9
Carub.0008s1844 Capsella rubella HOM05D003759 ORTHO05D004149 3.0e-09 66.6 243 31.3
arahy.Tifrunner.gnm1.ann1.WN4J7U Arachis hypogaea HOM05D003759 ORTHO05D004149 3.9e-09 66.2 260 28.8
A01p07630 Brassica napus HOM05D003759 ORTHO05D004149 3.9e-09 66.2 231 28.6
TAR383G0583 Trochodendron aralioides HOM05D003759 ORTHO05D004149 3.9e-09 66.2 238 27.7
GSVIVG01023625001 Vitis vinifera HOM05D003759 ORTHO05D004149 3.9e-09 66.2 234 27.8
arahy.Tifrunner.gnm1.ann1.5MW7KS Arachis hypogaea HOM05D003759 ORTHO05D004149 5.1e-09 65.9 260 28.8
BraA01t00706Z Brassica rapa HOM05D003759 ORTHO05D004149 5.1e-09 65.9 231 28.6
Lalb_Chr13g0300821 Lupinus albus HOM05D003759 ORTHO05D004149 5.1e-09 65.9 263 25.9
Aa31LG3G13740 Aethionema arabicum HOM05D003759 ORTHO05D004149 6.7e-09 65.5 241 29.5
MD15G1151500 Malus domestica HOM05D003759 ORTHO05D004149 6.7e-09 65.5 266 28.9
BcaNung04561 Brassica carinata HOM05D003759 ORTHO05D004149 8.7e-09 65.1 245 26.1
CARHR271690 Cardamine hirsuta HOM05D003759 ORTHO05D004149 1.1e-08 64.7 243 28.8
C07p58060 Brassica napus HOM05D000058 ORTHO05D000077 1.9e-08 63.9 243 29.2
Gorai.004G292200 Gossypium raimondii HOM05D003759 ORTHO05D004149 1.9e-08 63.9 243 27.6
THA.LOC104813538 Tarenaya hassleriana HOM05D003759 ORTHO05D004149 1.9e-08 63.9 239 28.9
PSO384G1085 Papaver somniferum HOM05D003759 ORTHO05D004149 2.5e-08 63.5 260 28.1
Actinidia38317 Actinidia chinensis HOM05D003759 ORTHO05D004149 3.3e-08 63.2 79 48.1
BcaC09g51852 Brassica carinata HOM05D003759 ORTHO05D004149 3.3e-08 63.2 233 28.8
Hma1.2p1_0222F.1_g093656 Hydrangea macrophylla HOM05D003759 ORTHO05D004149 3.3e-08 63.2 96 42.7
Hma1.2p1_2680F.1_g326800 Hydrangea macrophylla HOM05D003759 ORTHO05D004149 3.3e-08 63.2 96 42.7
PSO339G1361 Papaver somniferum HOM05D003759 ORTHO05D004149 3.3e-08 63.2 264 28.4
C01p08320 Brassica napus HOM05D003759 ORTHO05D004149 4.3e-08 62.8 233 28.3
BolC7t46265H Brassica oleracea HOM05D003759 ORTHO05D004149 4.3e-08 62.8 231 29.4
Aqoxy7G03381 Aquilegia oxysepala HOM05D003759 ORTHO05D004149 5.7e-08 62.4 259 26.3
Sp7g28510 Schrenkiella parvula HOM05D003759 ORTHO05D004149 5.7e-08 62.4 235 28.5
Actinidia38668 Actinidia chinensis HOM05D003759 ORTHO05D004149 7.4e-08 62.0 78 44.9
Cpa.g.sc46.168 Carica papaya HOM05D003759 ORTHO05D004149 7.4e-08 62.0 248 29.0
CsaV3_1G029030 Cucumis sativus L. HOM05D003759 ORTHO05D004149 7.4e-08 62.0 271 27.3
MELO3C010213.2 Cucumis melo HOM05D003759 ORTHO05D004149 9.7e-08 61.6 269 27.9
Prupe.7G264400 Prunus persica HOM05D003759 ORTHO05D004149 9.7e-08 61.6 269 28.3
BraA03t10564Z Brassica rapa HOM05D003759 ORTHO05D004149 1.3e-07 61.2 231 27.3
Dinv41366 Davidia involucrata HOM05D003759 ORTHO05D004149 1.6e-07 60.8 62 50.0
HanXRQChr03g0065561 Helianthus annuus HOM05D003759 ORTHO05D004149 1.6e-07 60.8 256 27.3
Dinv42845 Davidia involucrata HOM05D003759 ORTHO05D004149 3.7e-07 59.7 79 44.3
DCAR_021655 Daucus carota HOM05D002201 ORTHO05D007560 6.3e-07 58.9 70 51.4
Lj6g0003054 Lotus japonicus HOM05D003759 ORTHO05D004149 8.2e-07 58.5 267 27.3
HanXRQChr09g0244591 Helianthus annuus HOM05D003759 ORTHO05D004149 1.1e-06 58.2 239 28.5
FAN28G1366 Fragaria x ananassa HOM05D003759 ORTHO05D004149 1.4e-06 57.8 266 24.8
Lsat_1_v5_gn_7_50020 Lactuca sativa HOM05D003759 ORTHO05D004149 1.8e-06 57.4 259 25.9
Rhsim01G0028200 Rhododendron simsii HOM05D003759 ORTHO05D004149 1.8e-06 57.4 58 53.4
AL7G21510 Arabidopsis lyrata HOM05D003759 ORTHO05D004149 4.1e-06 56.2 266 27.1
AL8G33980 Arabidopsis lyrata HOM05D003759 ORTHO05D004149 5.3e-06 55.8 210 30.0
MD02G1006500 Malus domestica HOM05D003759 ORTHO05D004149 5.3e-06 55.8 272 26.5
Os08g0270800 Oryza sativa ssp. japonica HOM05D037779 ORTHO05D004149 5.3e-06 55.8 248 27.0
Actinidia24379 Actinidia chinensis HOM05D003759 ORTHO05D004149 6.9e-06 55.5 73 45.2
CiPaw.15G166900 Carya illinoinensis HOM05D003759 ORTHO05D004149 6.9e-06 55.5 250 26.0
Sabra06G0139200 Salix brachista HOM05D003759 ORTHO05D004149 6.9e-06 55.5 258 26.0
vmacro16796 Vaccinium macrocarpon HOM05D003759 ORTHO05D004149 9.0e-06 55.1 59 50.8


User provided reference genes

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