Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g7196 Utricularia gibba HOM05D006914 ORTHO05D008583 6.2e-49 197.2 104 100.0
MSTRG.10711 Avicennia marina HOM05D006914 ORTHO05D008583 1.6e-36 156.0 95 82.1
Migut.K00305 Erythranthe guttata HOM05D006914 ORTHO05D008583 5.1e-35 151.0 89 85.4
Oeu055276.1 Olea europaea HOM05D006914 ORTHO05D008583 5.1e-35 151.0 92 82.6
Oeu021334.1 Olea europaea HOM05D006914 ORTHO05D008583 8.7e-35 150.2 95 78.9
Cc06_g14590 Coffea canephora HOM05D006914 ORTHO05D008583 2.1e-33 145.6 89 82.0
Nitab4.5_0009003g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 8.1e-33 143.7 89 79.8
Sopen05g034470 Solanum pennellii HOM05D006914 ORTHO05D008583 1.4e-32 142.9 89 80.9
Peaxi162Scf00156g01316 Petunia axillaris HOM05D006914 ORTHO05D008583 2.4e-32 142.1 89 79.8
Dinv41349 Davidia involucrata HOM05D006914 ORTHO05D008583 1.2e-31 139.8 89 77.5
FAN23G1758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 1.2e-31 139.8 89 76.4
FAN26G2758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 1.2e-31 139.8 89 76.4
RcHm_v2.0_Chr2g0085261 Rosa chinensis HOM05D006914 ORTHO05D008583 2.6e-31 138.7 89 76.4
Nn8g40004 Nelumbo nucifera HOM05D006914 ORTHO05D008583 4.5e-31 137.9 89 74.2
Nitab4.5_0001448g0020 Nicotiana tabacum HOM05D006914 ORTHO05D008583 4.5e-31 137.9 89 77.5
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 1.0e-30 136.7 89 76.4
GSVIVG01008452001 Vitis vinifera HOM05D006914 ORTHO05D008583 1.0e-30 136.7 89 74.2
CSS0049762 Camellia sinensis var. sinensis HOM05D006914 ORTHO05D008583 1.3e-30 136.3 89 76.4
HanXRQChr03g0066101 Helianthus annuus HOM05D006914 ORTHO05D008583 1.7e-30 136.0 101 68.3
FvH4_1g00640 Fragaria vesca HOM05D006914 ORTHO05D008583 2.2e-30 135.6 89 75.3
Hund04582 Selenicereus undatus HOM05D000185 ORTHO05D000105 2.9e-30 135.2 89 74.2
CANSAT56G0295 Cannabis sativa HOM05D006914 ORTHO05D008583 6.5e-30 134.0 89 75.3
ECA240G0809 Erigeron canadensis HOM05D006914 ORTHO05D008583 6.5e-30 134.0 89 76.4
Gohir.D08G256600 Gossypium hirsutum HOM05D006914 ORTHO05D008583 6.5e-30 134.0 89 74.2
Gorai.004G273700 Gossypium raimondii HOM05D006914 ORTHO05D008583 6.5e-30 134.0 89 74.2
Hma1.2p1_2085F.1_g313670 Hydrangea macrophylla HOM05D006914 ORTHO05D008583 6.5e-30 134.0 89 74.2
Lsat_1_v5_gn_7_49520 Lactuca sativa HOM05D006914 ORTHO05D008583 6.5e-30 134.0 101 67.3
Nitab4.5_0000233g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 6.5e-30 134.0 89 76.4
TPR.G25932 Trifolium pratense HOM05D006914 ORTHO05D008583 1.1e-29 133.3 89 73.0
MD02G1005200 Malus domestica HOM05D006914 ORTHO05D008583 1.4e-29 132.9 92 71.7
Prupe.7G265800 Prunus persica HOM05D006914 ORTHO05D008583 1.9e-29 132.5 89 75.3
PGR102G2895 Punica granatum HOM05D006914 ORTHO05D008583 1.9e-29 132.5 89 71.9
Thecc.09G152600 Theobroma cacao HOM05D006914 ORTHO05D008583 1.9e-29 132.5 89 73.0
TAR383G0505 Trochodendron aralioides HOM05D006914 ORTHO05D008583 2.5e-29 132.1 91 73.6
Actinidia28379 Actinidia chinensis HOM05D006914 ORTHO05D008583 3.2e-29 131.7 89 73.0
Cpa.g.sc46.184 Carica papaya HOM05D006914 ORTHO05D008583 3.2e-29 131.7 89 73.0
CsaV3_2G007660 Cucumis sativus L. HOM05D006914 ORTHO05D008583 3.2e-29 131.7 89 74.2
Potri.006G181400 Populus trichocarpa HOM05D006914 ORTHO05D008583 3.2e-29 131.7 89 74.2
Glyma.04G155300 Glycine max HOM05D006914 ORTHO05D008583 4.2e-29 131.3 89 71.9
Atru.chr7.325 Acer truncatum HOM05D006914 ORTHO05D008583 5.5e-29 131.0 89 70.8
COL.COLO4_23940 Corchorus olitorius HOM05D006914 ORTHO05D008583 5.5e-29 131.0 89 74.2
Lalb_Chr11g0072501 Lupinus albus HOM05D006914 ORTHO05D008583 5.5e-29 131.0 89 75.3
MD15G1149500 Malus domestica HOM05D006914 ORTHO05D008583 5.5e-29 131.0 89 73.0
MELO3C004120.2 Cucumis melo HOM05D006914 ORTHO05D008583 7.1e-29 130.6 89 73.0
Ah.13g066550 Amaranthus hybridus HOM05D006914 ORTHO05D008583 9.3e-29 130.2 89 70.8
Ciclev10009995m.g Citrus clementina HOM05D006914 ORTHO05D008583 9.3e-29 130.2 89 70.8
QL02p093962 Quercus lobata HOM05D006914 ORTHO05D008583 9.3e-29 130.2 89 73.0
TWI34G0278 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 9.3e-29 130.2 89 75.3
Actinidia23563 Actinidia chinensis HOM05D006914 ORTHO05D008583 1.6e-28 129.4 89 71.9
AT5G57860 Arabidopsis thaliana HOM05D006914 ORTHO05D008583 1.6e-28 129.4 89 73.0
Duzib150G1072 Durio zibethinus HOM05D006914 ORTHO05D008583 1.6e-28 129.4 89 71.9
Duzib187G0910 Durio zibethinus HOM05D006914 ORTHO05D008583 1.6e-28 129.4 89 71.9
Ca_02367_v3 Cicer arietinum L. HOM05D006914 ORTHO05D008583 2.7e-28 128.6 89 70.8
Aqoxy5G02159 Aquilegia oxysepala HOM05D006914 ORTHO05D008583 4.6e-28 127.9 89 70.8
CARHR271600 Cardamine hirsuta HOM05D006914 ORTHO05D008583 4.6e-28 127.9 89 71.9
AUR62015440 Chenopodium quinoa HOM05D006914 ORTHO05D008583 4.6e-28 127.9 89 69.7
Lj6g0027463 Lotus japonicus HOM05D006914 ORTHO05D008583 4.6e-28 127.9 95 66.3
CiPaw.15G165400 Carya illinoinensis HOM05D006914 ORTHO05D008583 6.0e-28 127.5 89 73.0
ClCG02G014340 Citrullus lanatus HOM05D006914 ORTHO05D008583 6.0e-28 127.5 89 70.8
Psat1g017920 Pisum sativum HOM05D006914 ORTHO05D008583 6.0e-28 127.5 94 68.1
Sp6g19550 Schrenkiella parvula HOM05D006914 ORTHO05D008583 6.0e-28 127.5 89 71.9
TWI63G1652 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 6.0e-28 127.5 89 73.0
AL8G33910 Arabidopsis lyrata HOM05D006914 ORTHO05D008583 1.0e-27 126.7 89 71.9
Carub.0008s1839 Capsella rubella HOM05D006914 ORTHO05D008583 1.0e-27 126.7 89 70.8
AUR62002229 Chenopodium quinoa HOM05D006914 ORTHO05D008583 1.0e-27 126.7 89 69.7
Manes.14G142700 Manihot esculenta HOM05D006914 ORTHO05D008583 1.3e-27 126.3 89 67.4
VMungo0720G1978 Vigna mungo HOM05D006914 ORTHO05D008583 1.3e-27 126.3 89 69.7
EL10Ac3g05865 Beta vulgaris HOM05D006914 ORTHO05D008583 1.8e-27 125.9 89 67.4
Glyma.06G225000 Glycine max HOM05D006914 ORTHO05D008583 1.8e-27 125.9 89 69.7
Medtr2g046160 Medicago truncatula HOM05D006914 ORTHO05D008583 1.8e-27 125.9 89 68.5
Thhalv10015128m.g Eutrema salsugineum HOM05D006914 ORTHO05D008583 2.3e-27 125.6 89 70.8
Phvul.007G242700 Phaseolus vulgaris HOM05D006914 ORTHO05D008583 2.3e-27 125.6 89 68.5
Sed0012601 Sechium edule HOM05D006914 ORTHO05D008583 2.3e-27 125.6 89 71.9
Cfa020795 Carpinus fangiana HOM05D006914 ORTHO05D008583 3.0e-27 125.2 89 67.4
SGA_v2.0_scaffold222G42803 Striga asiatica HOM05D006914 ORTHO05D008583 3.9e-27 124.8 74 83.8
C02p13800 Brassica napus HOM05D006914 ORTHO05D008583 8.7e-27 123.6 89 69.7
BolC2t07499H Brassica oleracea HOM05D006914 ORTHO05D008583 8.7e-27 123.6 89 69.7
PSO111G0010 Papaver somniferum HOM05D006914 ORTHO05D008583 1.1e-26 123.2 95 64.2
Zm00001eb329210 Zea mays HOM05D006914 ORTHO05D008583 1.9e-26 122.5 94 66.0
BolC3t13912H Brassica oleracea HOM05D006914 ORTHO05D008583 2.5e-26 122.1 89 68.5
Os03g0364000 Oryza sativa ssp. japonica HOM05D006914 ORTHO05D008583 3.3e-26 121.7 95 66.3
Sed0026010 Sechium edule HOM05D006914 ORTHO05D008583 4.3e-26 121.3 89 69.7
HPP92_020604 Vanilla planifolia HOM05D006914 ORTHO05D008583 4.3e-26 121.3 89 67.4
ATR0763G197 Amborella trichopoda HOM05D006914 ORTHO05D008583 9.6e-26 120.2 96 60.4
A02p08150 Brassica napus HOM05D006914 ORTHO05D008583 9.6e-26 120.2 89 68.5
A03p12500 Brassica napus HOM05D006914 ORTHO05D008583 1.3e-25 119.8 89 66.3
BraA03t10565Z Brassica rapa HOM05D006914 ORTHO05D008583 1.3e-25 119.8 89 66.3
Aa31LG3G13700 Aethionema arabicum HOM05D006914 ORTHO05D008583 2.1e-25 119.0 89 66.3
C09p49750 Brassica napus HOM05D006914 ORTHO05D008583 2.8e-25 118.6 89 67.4
PGSC0003DMG400023462 Solanum tuberosum HOM05D006914 ORTHO05D008583 3.7e-25 118.2 74 79.7
CAN.G694.81 Capsicum annuum HOM05D006914 ORTHO05D008583 1.1e-24 116.7 74 78.4
CDE05G0490 Ceratophyllum demersum HOM05D006914 ORTHO05D008583 1.1e-24 116.7 92 64.1
TAR626G0439 Trochodendron aralioides HOM05D006914 ORTHO05D008583 2.0e-23 112.5 74 75.7
Rhsim03G0258700 Rhododendron simsii HOM05D000079 ORTHO05D000211 5.8e-23 110.9 91 67.0
Pp3c19_17380 Physcomitrium patens HOM05D006914 ORTHO05D008583 1.0e-22 110.2 90 64.4
vmacro06059 Vaccinium macrocarpon HOM05D000079 ORTHO05D000211 1.7e-22 109.4 74 71.6
Eucgr.C02509 Eucalyptus grandis HOM05D006914 ORTHO05D008583 2.2e-22 109.0 74 71.6
BcaB05g22379 Brassica carinata HOM05D006914 ORTHO05D008583 1.1e-21 106.7 89 64.0
PSO782G4630 Papaver somniferum HOM05D006914 ORTHO05D008583 4.2e-21 104.8 95 54.7
BraA02t05889Z Brassica rapa HOM05D006914 ORTHO05D008583 5.5e-21 104.4 79 67.1
Haze_19153 Corylus avellana HOM05D006914 ORTHO05D008583 2.1e-20 102.4 74 66.2
arahy.Tifrunner.gnm1.ann1.S2MTQV Arachis hypogaea HOM05D006914 ORTHO05D008583 2.7e-20 102.1 74 64.9
arahy.Tifrunner.gnm1.ann1.6E7PQ4 Arachis hypogaea HOM05D006914 ORTHO05D008583 4.6e-20 101.3 74 64.9
CBR_g51779 Chara braunii HOM05D006914 ORTHO05D008583 4.6e-20 101.3 91 59.3
AagrBONN_evm.TU.Sc2ySwM_362.2477 Anthoceros agrestis HOM05D006914 ORTHO05D008583 5.1e-19 97.8 91 63.7
Mapoly0004s0198 Marchantia polymorpha HOM05D006914 ORTHO05D008583 8.7e-19 97.1 83 59.0
SMO304G0019 Selaginella moellendorffii HOM05D006914 ORTHO05D008583 1.1e-18 96.7 73 64.4
Pp3c17_5060 Physcomitrium patens HOM05D006914 ORTHO05D008583 4.1e-16 88.2 104 52.9
Gohir.A08G236100 Gossypium hirsutum HOM05D006914 ORTHO05D008583 6.9e-16 87.4 62 67.7
Cre12.g554750 Chlamydomonas reinhardtii HOM05D006914 ORTHO05D008583 2.9e-14 82.0 84 51.2
Sc13g0007320 Simmondsia chinensis HOM05D006914 ORTHO05D008583 6.5e-14 80.9 62 66.1
AagrBONN_evm.TU.Sc2ySwM_228.3148 Anthoceros agrestis HOM05D006914 ORTHO05D008583 5.5e-13 77.8 77 49.4
SHI02838 Sapria himalayana HOM05D006914 ORTHO05D008583 2.7e-12 75.5 91 44.0
Haze_19154 Corylus avellana HOM05D002983 ORTHO05D003451 8.8e-11 70.5 62 58.1
BcaC04g19922 Brassica carinata HOM05D006914 ORTHO05D008583 2.5e-10 68.9 51 66.7
PRCOL_00002080 Prasinoderma coloniale HOM05D006914 ORTHO05D008583 3.3e-10 68.6 94 47.9
Aa31LG1G14450 Aethionema arabicum HOM05D006914 ORTHO05D008583 7.4e-10 67.4 73 49.3
MCO12G243 Micromonas commoda HOM05D006914 ORTHO05D008583 2.6e-07 58.9 113 36.3


User provided reference genes

Program Settings