Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g7195 Utricularia gibba HOM05D005247 ORTHO05D006571 7.1e-223 776.9 389 100.0
MSTRG.21809 Avicennia marina HOM05D005247 ORTHO05D006571 2.9e-115 419.5 318 65.1
SGA_v2.0_scaffold89G27537 Striga asiatica HOM05D005247 ORTHO05D006571 1.7e-112 410.2 321 61.1
Migut.N00115 Erythranthe guttata HOM05D005247 ORTHO05D006571 6.6e-112 408.3 351 58.7
SGA_v2.0_scaffold175G39318 Striga asiatica HOM05D005247 ORTHO05D006571 3.9e-104 382.5 322 58.7
Prupe.1G141100 Prunus persica HOM05D005247 ORTHO05D006571 1.3e-102 377.5 320 58.4
Phvul.003G101400 Phaseolus vulgaris HOM05D005247 ORTHO05D006571 9.0e-101 371.3 318 57.2
TAR362G0112 Trochodendron aralioides HOM05D005247 ORTHO05D006571 1.5e-100 370.5 322 55.3
QL06p007567 Quercus lobata HOM05D005247 ORTHO05D006571 2.6e-100 369.8 320 56.2
Actinidia23422 Actinidia chinensis HOM05D005247 ORTHO05D006571 3.4e-100 369.4 324 54.6
CSS0036429 Camellia sinensis var. sinensis HOM05D005247 ORTHO05D006571 5.8e-100 368.6 319 55.5
Rhsim04G0216900 Rhododendron simsii HOM05D005247 ORTHO05D006571 9.9e-100 367.9 324 55.2
VMungo1215G2055 Vigna mungo HOM05D005247 ORTHO05D006571 9.9e-100 367.9 329 56.5
DCAR_024549 Daucus carota HOM05D005247 ORTHO05D006571 1.7e-99 367.1 319 56.4
MD16G1174400 Malus domestica HOM05D005247 ORTHO05D006571 2.9e-99 366.3 319 58.9
Medtr3g069790 Medicago truncatula HOM05D005247 ORTHO05D006571 3.8e-99 365.9 379 49.9
Glyma.17G023300 Glycine max HOM05D005247 ORTHO05D006571 4.9e-99 365.5 320 56.6
Glyma.07G251000 Glycine max HOM05D005247 ORTHO05D006571 8.4e-99 364.8 320 56.6
CAN.G311.32 Capsicum annuum HOM05D005247 ORTHO05D006571 1.4e-98 364.0 320 55.9
Lalb_Chr12g0196461 Lupinus albus HOM05D005247 ORTHO05D006571 1.4e-98 364.0 320 55.6
Solyc07g041930.3 Solanum lycopersicum HOM05D005247 ORTHO05D006571 1.4e-98 364.0 320 55.9
Ca_21545_v3 Cicer arietinum L. HOM05D005247 ORTHO05D006571 1.9e-98 363.6 318 56.3
Hma1.2p1_0078F.1_g040780 Hydrangea macrophylla HOM05D005247 ORTHO05D006571 2.4e-98 363.2 320 54.7
TPR.G29803 Trifolium pratense HOM05D005247 ORTHO05D006571 3.2e-98 362.8 377 49.9
Sopen07g021430 Solanum pennellii HOM05D005247 ORTHO05D006571 4.2e-98 362.5 320 56.2
MD13G1173000 Malus domestica HOM05D005247 ORTHO05D006571 7.1e-98 361.7 317 56.8
Nitab4.5_0000343g0170 Nicotiana tabacum HOM05D005247 ORTHO05D006571 1.6e-97 360.5 320 55.6
Peaxi162Scf00127g00146 Petunia axillaris HOM05D005247 ORTHO05D006571 2.1e-97 360.1 320 55.6
vmacro08197 Vaccinium macrocarpon HOM05D005247 ORTHO05D006571 2.7e-97 359.8 338 53.3
CiPaw.02G086000 Carya illinoinensis HOM05D005247 ORTHO05D006571 7.9e-97 358.2 318 54.1
Nitab4.5_0006478g0050 Nicotiana tabacum HOM05D005247 ORTHO05D006571 7.9e-97 358.2 323 54.5
TPR.G28788 Trifolium pratense HOM05D005247 ORTHO05D006571 1.0e-96 357.8 365 49.6
Cfa015350 Carpinus fangiana HOM05D005247 ORTHO05D006571 3.9e-96 355.9 315 54.9
Psat5g125320 Pisum sativum HOM05D005247 ORTHO05D006571 1.9e-95 353.6 320 54.1
Lj4g0024405 Lotus japonicus HOM05D005247 ORTHO05D006571 3.3e-95 352.8 320 54.1
Nitab4.5_0009436g0020 Nicotiana tabacum HOM05D005247 ORTHO05D006571 3.3e-95 352.8 317 54.3
Ciclev10005079m.g Citrus clementina HOM05D005247 ORTHO05D006571 5.6e-95 352.1 327 53.5
Eucgr.H03774 Eucalyptus grandis HOM05D005247 ORTHO05D006571 9.6e-95 351.3 326 54.0
ECA234G2791 Erigeron canadensis HOM05D005247 ORTHO05D006571 1.3e-94 350.9 317 53.9
Nitab4.5_0001357g0080 Nicotiana tabacum HOM05D005247 ORTHO05D006571 1.3e-94 350.9 319 54.2
Duzib151G0039 Durio zibethinus HOM05D005247 ORTHO05D006571 2.8e-94 349.7 320 53.8
Lsat_1_v5_gn_4_34220 Lactuca sativa HOM05D005247 ORTHO05D006571 6.2e-94 348.6 317 54.3
Thecc.04G278500 Theobroma cacao HOM05D005247 ORTHO05D006571 6.2e-94 348.6 320 53.4
HanXRQChr17g0562111 Helianthus annuus HOM05D005247 ORTHO05D006571 2.4e-93 346.7 320 53.8
AUR62040732 Chenopodium quinoa HOM05D005247 ORTHO05D006571 9.0e-93 344.7 324 52.8
Sc13g0003580 Simmondsia chinensis HOM05D005247 ORTHO05D006571 1.5e-92 344.0 318 51.6
GSVIVG01017794001 Vitis vinifera HOM05D005247 ORTHO05D006571 1.5e-92 344.0 320 55.0
TWI09G0062 Tripterygium wilfordii HOM05D005247 ORTHO05D006571 2.6e-92 343.2 320 52.5
Gohir.A09G233900 Gossypium hirsutum HOM05D005247 ORTHO05D006571 4.5e-92 342.4 317 52.4
Potri.008G205300 Populus trichocarpa HOM05D005247 ORTHO05D006571 7.6e-92 341.7 320 52.2
Gorai.006G257600 Gossypium raimondii HOM05D005247 ORTHO05D006571 1.0e-91 341.3 317 52.7
Cc03_g02260 Coffea canephora HOM05D005247 ORTHO05D006571 1.3e-91 340.9 318 51.9
EL10Ac3g06569 Beta vulgaris HOM05D005247 ORTHO05D006571 3.8e-91 339.3 320 52.8
PGR142G1936 Punica granatum HOM05D005247 ORTHO05D006571 3.8e-91 339.3 321 51.7
AL7G39790 Arabidopsis lyrata HOM05D005247 ORTHO05D006571 4.9e-91 339.0 316 50.3
AUR62043783 Chenopodium quinoa HOM05D005247 ORTHO05D006571 6.5e-91 338.6 317 52.7
Carub.0007s2616 Capsella rubella HOM05D005247 ORTHO05D006571 1.4e-90 337.4 315 49.8
Ah.13g074520 Amaranthus hybridus HOM05D005247 ORTHO05D006571 2.5e-90 336.7 327 49.8
RcHm_v2.0_Chr4g0421281 Rosa chinensis HOM05D005247 ORTHO05D006571 2.5e-90 336.7 310 54.2
THA.LOC104802559 Tarenaya hassleriana HOM05D005247 ORTHO05D006571 2.5e-90 336.7 317 51.4
CANSAT78G0941 Cannabis sativa HOM05D005247 ORTHO05D006571 4.2e-90 335.9 320 52.2
Gohir.D09G234700 Gossypium hirsutum HOM05D005247 ORTHO05D006571 7.1e-90 335.1 317 52.4
Sp7g13890 Schrenkiella parvula HOM05D005247 ORTHO05D006571 2.1e-89 333.6 316 50.6
CARHR290040 Cardamine hirsuta HOM05D005247 ORTHO05D006571 2.7e-89 333.2 316 49.7
Haze_01257 Corylus avellana HOM05D005247 ORTHO05D006571 2.7e-89 333.2 345 49.9
Atru.chr4.2766 Acer truncatum HOM05D005247 ORTHO05D006571 3.5e-89 332.8 317 52.4
Carub.0003s2149 Capsella rubella HOM05D005247 ORTHO05D006571 6.0e-89 332.0 368 45.7
A05p27200 Brassica napus HOM05D005247 ORTHO05D006571 1.3e-88 330.9 323 48.6
Thhalv10025397m.g Eutrema salsugineum HOM05D005247 ORTHO05D006571 1.8e-88 330.5 316 49.4
Nn7g38324 Nelumbo nucifera HOM05D005247 ORTHO05D006571 1.8e-88 330.5 320 49.7
AT4G15640 Arabidopsis thaliana HOM05D005247 ORTHO05D006571 2.3e-88 330.1 316 49.1
BcaC05g28162 Brassica carinata HOM05D005247 ORTHO05D006571 3.9e-88 329.3 317 49.5
C05p41980 Brassica napus HOM05D005247 ORTHO05D006571 3.9e-88 329.3 317 49.5
BolC5t32932H Brassica oleracea HOM05D005247 ORTHO05D006571 3.9e-88 329.3 317 49.5
Manes.15G016200 Manihot esculenta HOM05D005247 ORTHO05D006571 3.9e-88 329.3 320 52.2
BcaB06g26247 Brassica carinata HOM05D005247 ORTHO05D006571 6.7e-88 328.6 317 48.9
BraA05t21609Z Brassica rapa HOM05D005247 ORTHO05D006571 8.7e-88 328.2 317 49.2
Cpa.g.sc16.124 Carica papaya HOM05D005247 ORTHO05D006571 8.7e-88 328.2 314 50.3
FAN07G0437 Fragaria x ananassa HOM05D005247 ORTHO05D006571 1.1e-87 327.8 307 54.1
arahy.Tifrunner.gnm1.ann1.A4UT9N Arachis hypogaea HOM05D005247 ORTHO05D006571 1.5e-87 327.4 378 46.6
Sp3g19500 Schrenkiella parvula HOM05D005247 ORTHO05D006571 1.9e-87 327.0 323 48.0
FvH4_4g17340 Fragaria vesca HOM05D005247 ORTHO05D006571 2.5e-87 326.6 307 54.1
FAN17G1560 Fragaria x ananassa HOM05D005247 ORTHO05D006571 4.3e-87 325.9 315 53.3
Dinv38319 Davidia involucrata HOM05D005247 ORTHO05D006571 7.4e-87 325.1 258 60.5
Aqoxy5G00647 Aquilegia oxysepala HOM05D005247 ORTHO05D006571 9.6e-87 324.7 317 49.2
arahy.Tifrunner.gnm1.ann1.8Y06GW Arachis hypogaea HOM05D005247 ORTHO05D006571 1.3e-86 324.3 319 50.2
Aa31LG9G1800 Aethionema arabicum HOM05D005247 ORTHO05D006571 8.2e-86 321.6 316 48.4
AT3G21465 Arabidopsis thaliana HOM05D005247 ORTHO05D006571 5.3e-85 318.9 323 47.1
AL3G35540 Arabidopsis lyrata HOM05D005247 ORTHO05D006571 1.5e-84 317.4 323 46.7
Zm00001eb330100 Zea mays HOM05D005247 ORTHO05D006571 5.8e-84 315.5 321 49.5
CsaV3_3G014210 Cucumis sativus L. HOM05D005247 ORTHO05D006571 1.0e-83 314.7 316 50.0
PSO541G1846 Papaver somniferum HOM05D005247 ORTHO05D006571 1.7e-83 313.9 321 48.3
Os07g0668200 Oryza sativa ssp. japonica HOM05D005247 ORTHO05D006571 3.8e-83 312.8 327 47.1
PSO675G0879 Papaver somniferum HOM05D005247 ORTHO05D006571 5.0e-83 312.4 317 48.3
FAN12G4219 Fragaria x ananassa HOM05D005247 ORTHO05D006571 8.4e-83 311.6 333 50.2
ClCG05G005860 Citrullus lanatus HOM05D005247 ORTHO05D006571 1.1e-82 311.2 319 49.5
Sed0017520 Sechium edule HOM05D005247 ORTHO05D006571 3.5e-81 306.2 320 48.4
TAR633G1275 Trochodendron aralioides HOM05D005247 ORTHO05D006571 1.9e-79 300.4 258 55.8
Thhalv10021000m.g Eutrema salsugineum HOM05D005247 ORTHO05D006571 2.8e-78 296.6 319 47.0
Dinv44420 Davidia involucrata HOM05D005247 ORTHO05D006571 6.3e-78 295.4 233 60.9
ATR0706G238 Amborella trichopoda HOM05D005247 ORTHO05D006571 2.6e-76 290.0 322 44.4
vmacro08194 Vaccinium macrocarpon HOM05D005247 ORTHO05D006571 4.5e-76 289.3 260 57.3
FAN12G3211 Fragaria x ananassa HOM05D005247 ORTHO05D006571 8.5e-75 285.0 334 46.1
Hma1.2p1_3003F.1_g331535 Hydrangea macrophylla HOM05D005247 ORTHO05D006571 1.1e-69 268.1 326 44.8
BcaB04g18303 Brassica carinata HOM05D005247 ORTHO05D006571 2.2e-67 260.4 231 52.8
Eucgr.H03753 Eucalyptus grandis HOM05D005247 ORTHO05D006571 5.0e-67 259.2 253 51.8
MELO3C006614.2 Cucumis melo HOM05D005247 ORTHO05D006571 6.1e-65 252.3 240 50.8
BolC8t48291H Brassica oleracea HOM05D005247 ORTHO05D006571 7.4e-63 245.4 352 39.5
Hund20585 Selenicereus undatus HOM05D005247 ORTHO05D006571 1.8e-61 240.7 207 56.5
Sabra08G0156600 Salix brachista HOM05D005247 ORTHO05D006571 3.5e-60 236.5 207 54.6
Atru.chr4.2761 Acer truncatum HOM05D005247 ORTHO05D006571 1.0e-56 224.9 207 53.1
COL.COLO4_13921 Corchorus olitorius HOM05D005247 ORTHO05D006571 5.2e-56 222.6 292 41.1
Lj6A670T87 Lonicera japonica HOM05D005247 ORTHO05D006571 3.1e-53 213.4 198 53.5
Psat4g226360 Pisum sativum HOM05D005247 ORTHO05D006571 8.5e-51 205.3 368 34.8
RcHm_v2.0_Chr4g0421901 Rosa chinensis HOM05D005247 ORTHO05D006571 1.2e-39 168.3 217 43.3
SHI00299 Sapria himalayana HOM05D005247 ORTHO05D000987 1.7e-38 164.5 274 35.8
BraA08t33173Z Brassica rapa HOM05D005247 ORTHO05D006571 2.9e-35 153.7 137 54.0
Eucgr.C02045 Eucalyptus grandis HOM05D005247 ORTHO05D006571 6.6e-35 152.5 155 52.9
SEGI_33954 Sequoiadendron giganteum HOM05D005247 ORTHO05D000001 1.4e-29 134.8 145 45.5
Mapoly0002s0143 Marchantia polymorpha HOM05D005247 ORTHO05D006571 2.4e-29 134.0 314 25.5
HPP92_013697 Vanilla planifolia HOM05D005247 ORTHO05D006571 3.6e-25 120.2 200 35.0
Psat5g177080 Pisum sativum HOM05D005247 ORTHO05D006571 6.2e-25 119.4 153 42.5
Sabra08G0156700 Salix brachista HOM05D005247 ORTHO05D006571 8.0e-25 119.0 115 50.4
Pp3c14_15200 Physcomitrium patens HOM05D005247 ORTHO05D006571 4.0e-24 116.7 315 24.8
CBR_g30222 Chara braunii HOM05D005247 ORTHO05D006571 8.3e-22 109.0 346 23.4
Psat6g103040 Pisum sativum HOM05D005247 ORTHO05D006571 4.6e-20 103.2 99 52.5
SMO202G0041 Selaginella moellendorffii HOM05D005247 ORTHO05D006571 7.8e-20 102.4 258 27.5
AagrBONN_evm.TU.Sc2ySwM_228.2885 Anthoceros agrestis HOM05D005247 ORTHO05D006571 1.7e-19 101.3 237 28.3
RcHm_v2.0_Chr4g0421891 Rosa chinensis HOM05D005247 ORTHO05D006571 7.3e-18 95.9 84 54.8
BcaC07g37894 Brassica carinata HOM05D005247 ORTHO05D006571 2.8e-17 94.0 143 40.6
Eucgr.F02603 Eucalyptus grandis HOM05D005247 ORTHO05D006571 4.0e-16 90.1 92 48.9
CAN.G640.20 Capsicum annuum HOM05D005247 ORTHO05D006571 3.0e-11 73.9 111 37.8
Eucgr.H03759 Eucalyptus grandis HOM05D005247 ORTHO05D006571 3.6e-09 67.0 91 39.6
Pp3c14_7470 Physcomitrium patens HOM05D005247 ORTHO05D006571 2.3e-08 64.3 129 31.0
CAN.G640.21 Capsicum annuum HOM05D005247 ORTHO05D006571 6.8e-08 62.8 52 53.8


User provided reference genes

Program Settings