Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g7167 Utricularia gibba HOM05D003622 ORTHO05D004453 9.5e-267 922.9 463 100.0
unitig_0.g2718 Utricularia gibba HOM05D003622 ORTHO05D004453 7.0e-185 651.0 463 73.2
MSTRG.26437 Avicennia marina HOM05D003622 ORTHO05D004453 2.3e-148 529.6 461 59.4
SalBow1G3694 Salvia bowleyana HOM05D003622 ORTHO05D004453 2.6e-147 526.2 469 59.3
SGA_v2.0_scaffold63G21826 Striga asiatica HOM05D003622 ORTHO05D004453 5.1e-135 485.3 479 55.3
SalBow6G3081 Salvia bowleyana HOM05D003622 ORTHO05D004453 1.3e-133 480.7 470 54.5
Migut.K00423 Erythranthe guttata HOM05D003622 ORTHO05D004453 2.1e-133 479.9 462 56.7
SGA_v2.0_scaffold464G52002 Striga asiatica HOM05D003622 ORTHO05D004453 4.0e-132 475.7 464 55.4
Oeu056946.1 Olea europaea HOM05D003622 ORTHO05D004453 4.3e-126 455.7 463 51.8
CSS0022552 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 2.1e-120 436.8 471 51.6
Actinidia21950 Actinidia chinensis HOM05D003622 ORTHO05D004453 3.0e-119 433.0 470 51.1
Oeu052762.1 Olea europaea HOM05D003622 ORTHO05D004453 5.1e-119 432.2 459 50.8
Dinv36478 Davidia involucrata HOM05D003622 ORTHO05D004453 2.8e-117 426.4 469 50.7
Migut.J01215 Erythranthe guttata HOM05D003622 ORTHO05D004453 6.2e-117 425.2 466 49.4
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 1.1e-116 424.5 461 51.0
Duzib187G1700 Durio zibethinus HOM05D003622 ORTHO05D004453 1.2e-115 421.0 468 50.9
CSS0042071 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 1.0e-114 417.9 461 51.0
Hma1.2p1_0343F.1_g130930 Hydrangea macrophylla HOM05D003622 ORTHO05D004453 1.0e-114 417.9 463 51.0
CSS0014966 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 1.3e-114 417.5 462 51.3
Duzib168G1318 Durio zibethinus HOM05D003622 ORTHO05D004453 1.1e-113 414.5 468 50.4
Atru.chr7.1951 Acer truncatum HOM05D003622 ORTHO05D004453 1.9e-113 413.7 468 48.9
PGSC0003DMG400030907 Solanum tuberosum HOM05D003622 ORTHO05D004453 5.5e-113 412.1 465 51.0
Ciclev10007427m.g Citrus clementina HOM05D003622 ORTHO05D004453 2.7e-112 409.8 471 47.1
Peaxi162Scf00088g01327 Petunia axillaris HOM05D003622 ORTHO05D004453 2.7e-112 409.8 470 49.6
Sopen07g003790 Solanum pennellii HOM05D003622 ORTHO05D004453 3.5e-112 409.5 465 49.9
Thecc.09G132400 Theobroma cacao HOM05D003622 ORTHO05D004453 3.5e-112 409.5 467 50.7
COL.COLO4_35161 Corchorus olitorius HOM05D003622 ORTHO05D004453 7.9e-112 408.3 465 51.0
Nitab4.5_0003393g0070 Nicotiana tabacum HOM05D003622 ORTHO05D004453 7.9e-112 408.3 470 49.8
Rhsim03G0251600 Rhododendron simsii HOM05D003622 ORTHO05D004453 7.9e-112 408.3 462 49.8
Cpa.g.sc46.43 Carica papaya HOM05D003622 ORTHO05D004453 5.1e-111 405.6 467 48.0
TWI32G0590 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 5.1e-111 405.6 467 48.0
Solyc07g007890.3 Solanum lycopersicum HOM05D003622 ORTHO05D004453 6.7e-111 405.2 464 49.6
vmacro07722 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 1.5e-110 404.1 466 49.8
Cfa003424 Carpinus fangiana HOM05D003622 ORTHO05D004453 1.9e-110 403.7 468 47.9
Lj4g0015305 Lotus japonicus HOM05D003622 ORTHO05D004453 1.9e-110 403.7 468 48.5
CAN.G1266.4 Capsicum annuum HOM05D003622 ORTHO05D004453 1.6e-109 400.6 470 49.1
Gorai.004G107500 Gossypium raimondii HOM05D003622 ORTHO05D004453 1.6e-109 400.6 472 47.2
Gohir.A06G053800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 2.1e-109 400.2 467 48.6
Gorai.010G061100 Gossypium raimondii HOM05D003622 ORTHO05D004453 2.1e-109 400.2 467 49.3
Nitab4.5_0002008g0030 Nicotiana tabacum HOM05D003622 ORTHO05D004453 2.1e-109 400.2 470 49.1
GSVIVG01015594001 Vitis vinifera HOM05D003622 ORTHO05D004453 3.7e-109 399.4 463 48.8
TWI34G1661 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 8.2e-109 398.3 467 47.5
RcHm_v2.0_Chr2g0087611 Rosa chinensis HOM05D003622 ORTHO05D004453 1.1e-108 397.9 467 48.0
FAN26G1654 Fragaria x ananassa HOM05D003622 ORTHO05D004453 1.4e-108 397.5 467 47.8
FvH4_1g02580 Fragaria vesca HOM05D003622 ORTHO05D004453 1.8e-108 397.1 467 47.8
Gohir.A08G088500 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.8e-108 397.1 471 47.3
Gorai.013G235300 Gossypium raimondii HOM05D003622 ORTHO05D004453 1.8e-108 397.1 476 48.5
Sabra06G0047800 Salix brachista HOM05D003622 ORTHO05D004453 2.4e-108 396.7 466 47.9
FAN19G0217 Fragaria x ananassa HOM05D003622 ORTHO05D004453 3.1e-108 396.4 467 47.8
Rhsim01G0061400 Rhododendron simsii HOM05D003622 ORTHO05D004453 3.1e-108 396.4 464 49.1
vmacro06154 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 3.1e-108 396.4 464 47.8
CiPaw.03G248700 Carya illinoinensis HOM05D003622 ORTHO05D004453 4.1e-108 396.0 471 47.1
Potri.006G065600 Populus trichocarpa HOM05D003622 ORTHO05D004453 9.0e-108 394.8 468 47.6
VMungo1215G2226 Vigna mungo HOM05D003622 ORTHO05D004453 9.0e-108 394.8 468 48.1
Sabra18G0107100 Salix brachista HOM05D003622 ORTHO05D004453 1.2e-107 394.4 466 48.1
TAR625G0175 Trochodendron aralioides HOM05D003622 ORTHO05D004453 1.2e-107 394.4 467 50.3
CANSAT11G0379 Cannabis sativa HOM05D003622 ORTHO05D004453 1.5e-107 394.0 471 46.7
FAN23G2517 Fragaria x ananassa HOM05D003622 ORTHO05D004453 1.5e-107 394.0 467 47.3
Gohir.D06G052700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 2.0e-107 393.7 467 48.6
Manes.06G047000 Manihot esculenta HOM05D003622 ORTHO05D004453 2.6e-107 393.3 468 47.9
FAN28G0611 Fragaria x ananassa HOM05D003622 ORTHO05D004453 3.4e-107 392.9 467 47.5
Glyma.13G160300 Glycine max HOM05D003622 ORTHO05D004453 5.9e-107 392.1 468 47.4
QL02p089888 Quercus lobata HOM05D003622 ORTHO05D004453 5.9e-107 392.1 468 47.6
Gohir.A13G200800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 7.6e-107 391.7 473 47.6
MD02G1023300 Malus domestica HOM05D003622 ORTHO05D004453 7.6e-107 391.7 464 48.3
Manes.14G116100 Manihot esculenta HOM05D003622 ORTHO05D004453 1.0e-106 391.3 469 47.1
arahy.Tifrunner.gnm1.ann1.HD4WN1 Arachis hypogaea HOM05D003622 ORTHO05D004453 1.7e-106 390.6 468 47.6
Glyma.17G111200 Glycine max HOM05D003622 ORTHO05D004453 1.7e-106 390.6 469 47.8
TAR636G0579 Trochodendron aralioides HOM05D003622 ORTHO05D004453 1.7e-106 390.6 470 50.4
Actinidia07317 Actinidia chinensis HOM05D003622 ORTHO05D004453 1.1e-105 387.9 464 48.9
Medtr4g115350 Medicago truncatula HOM05D003622 ORTHO05D004453 1.4e-105 387.5 467 47.5
Potri.018G126100 Populus trichocarpa HOM05D003622 ORTHO05D004453 1.9e-105 387.1 468 47.9
CiPaw.04G174900 Carya illinoinensis HOM05D003622 ORTHO05D004453 2.5e-105 386.7 452 48.2
TWI63G1810 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 2.5e-105 386.7 469 46.9
MBI13_g37002_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 4.2e-105 386.0 476 45.0
Cc06_g08050 Coffea canephora HOM05D003622 ORTHO05D004453 9.3e-105 384.8 442 49.8
arahy.Tifrunner.gnm1.ann1.DJE2D0 Arachis hypogaea HOM05D003622 ORTHO05D004453 1.2e-104 384.4 468 47.4
Phvul.003G169000 Phaseolus vulgaris HOM05D003622 ORTHO05D004453 1.6e-104 384.0 468 47.2
MELO3C010313.2 Cucumis melo HOM05D003622 ORTHO05D004453 3.6e-104 382.9 468 47.0
Gohir.D08G099700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 3.6e-104 382.9 451 47.5
CsaV3_1G026740 Cucumis sativus L. HOM05D003622 ORTHO05D004453 4.6e-104 382.5 468 47.0
Prupe.7G248800 Prunus persica HOM05D003622 ORTHO05D004453 4.6e-104 382.5 467 46.5
MD15G1166400 Malus domestica HOM05D003622 ORTHO05D004453 1.3e-103 380.9 459 46.8
Sed0001481 Sechium edule HOM05D003622 ORTHO05D004453 2.3e-103 380.2 470 46.4
Psat0s188g0040 Pisum sativum HOM05D003622 ORTHO05D004453 3.3e-102 376.3 469 46.7
DCAR_009323 Daucus carota HOM05D003622 ORTHO05D004453 4.3e-102 375.9 466 45.7
Lalb_Chr12g0198231 Lupinus albus HOM05D003622 ORTHO05D004453 4.3e-102 375.9 471 46.7
Sc08g0006260 Simmondsia chinensis HOM05D003622 ORTHO05D004453 9.7e-102 374.8 468 46.8
PSO017G7291 Papaver somniferum HOM05D003622 ORTHO05D004453 1.3e-101 374.4 464 46.6
Ca_06943_v3 Cicer arietinum L. HOM05D003622 ORTHO05D004453 2.2e-101 373.6 466 46.6
Lalb_Chr13g0301561 Lupinus albus HOM05D003622 ORTHO05D004453 8.2e-101 371.7 473 46.1
DCAR_020889 Daucus carota HOM05D003622 ORTHO05D004453 1.1e-100 371.3 465 46.0
ClCG06G011530 Citrullus lanatus HOM05D003622 ORTHO05D004453 1.8e-100 370.5 473 45.0
TPR.G24803 Trifolium pratense HOM05D003622 ORTHO05D004453 9.0e-100 368.2 461 46.0
Lalb_Chr07g0179261 Lupinus albus HOM05D003622 ORTHO05D004453 1.2e-99 367.9 468 44.9
PSO170G2238 Papaver somniferum HOM05D003622 ORTHO05D004453 1.2e-99 367.9 464 45.3
Hund09284 Selenicereus undatus HOM05D003622 ORTHO05D004453 1.2e-99 367.9 468 46.6
Sed0008371 Sechium edule HOM05D003622 ORTHO05D004453 3.8e-98 362.8 457 45.1
Ah.09g224810 Amaranthus hybridus HOM05D003622 ORTHO05D004453 2.5e-97 360.1 465 45.4
Aqoxy7G03634 Aquilegia oxysepala HOM05D003622 ORTHO05D004453 7.2e-97 358.6 466 44.8
Lj7C432T7 Lonicera japonica HOM05D003622 ORTHO05D004453 2.1e-96 357.1 464 45.9
Eucgr.C01387 Eucalyptus grandis HOM05D003622 ORTHO05D004453 1.0e-95 354.8 468 44.9
Lalb_Chr11g0072261 Lupinus albus HOM05D003622 ORTHO05D004453 1.4e-95 354.4 468 45.3
EL10Ac8g18721 Beta vulgaris HOM05D003622 ORTHO05D004453 2.3e-95 353.6 466 43.1
AUR62011177 Chenopodium quinoa HOM05D003622 ORTHO05D004453 2.2e-93 347.1 463 44.1
ECA234G4065 Erigeron canadensis HOM05D003622 ORTHO05D004453 3.7e-93 346.3 459 44.4
Aa31LG9G18070 Aethionema arabicum HOM05D003622 ORTHO05D004453 1.1e-92 344.7 455 43.5
Hund26549 Selenicereus undatus HOM05D003622 ORTHO05D004453 1.1e-92 344.7 473 43.8
HanXRQChr10g0315861 Helianthus annuus HOM05D003622 ORTHO05D004453 3.1e-92 343.2 468 43.6
AUR62013307 Chenopodium quinoa HOM05D003622 ORTHO05D004453 6.9e-92 342.0 463 43.0
Thhalv10003437m.g Eutrema salsugineum HOM05D003622 ORTHO05D004453 9.1e-92 341.7 440 44.8
PGR102G2297 Punica granatum HOM05D003622 ORTHO05D004453 2.6e-91 340.1 470 40.9
CARHR217470 Cardamine hirsuta HOM05D003622 ORTHO05D004453 3.4e-91 339.7 446 43.3
HanXRQChr12g0356631 Helianthus annuus HOM05D003622 ORTHO05D004453 1.3e-90 337.8 469 42.6
THA.LOC104808966 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 2.2e-90 337.0 467 41.5
A04p09700 Brassica napus HOM05D003622 ORTHO05D004453 5.0e-90 335.9 446 43.3
C04p43220 Brassica napus HOM05D003622 ORTHO05D004453 1.6e-88 330.9 446 42.8
BcaB06g26937 Brassica carinata HOM05D003622 ORTHO05D004453 3.6e-88 329.7 446 43.3
ATR0800G088 Amborella trichopoda HOM05D003622 ORTHO05D004453 6.1e-88 328.9 476 42.2
Gohir.D13G206400 Gossypium hirsutum HOM05D003622 ORTHO05D004453 3.0e-87 326.6 418 46.9
Duzib150G0473 Durio zibethinus HOM05D003622 ORTHO05D004453 5.2e-87 325.9 403 48.4
BcaB02g08053 Brassica carinata HOM05D003622 ORTHO05D004453 1.5e-86 324.3 439 44.4
Sp7g06890 Schrenkiella parvula HOM05D003622 ORTHO05D004453 1.5e-86 324.3 440 42.5
CDE03G0113 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 2.0e-86 323.9 456 41.7
CDE06G0586 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 1.1e-84 318.2 458 40.8
Carub.0007s3125 Capsella rubella HOM05D003622 ORTHO05D004453 1.8e-84 317.4 446 41.3
AL7G44290 Arabidopsis lyrata HOM05D003622 ORTHO05D004453 2.4e-84 317.0 447 42.7
Zm00001eb308130 Zea mays HOM05D003622 ORTHO05D004453 4.1e-84 316.2 449 41.0
Lsat_1_v5_gn_5_91841 Lactuca sativa HOM05D003622 ORTHO05D004453 3.5e-83 313.2 466 42.7
Carub.0001s0938 Capsella rubella HOM05D003622 ORTHO05D004453 6.5e-82 308.9 440 41.1
AT5G35430 Arabidopsis thaliana HOM05D003622 ORTHO05D004453 1.5e-81 307.8 446 42.2
Zm00001eb095440 Zea mays HOM05D003622 ORTHO05D004453 1.9e-81 307.4 455 41.1
Os09g0123100 Oryza sativa ssp. japonica HOM05D003622 ORTHO05D004453 1.7e-77 294.3 465 38.9
THA.LOC104826553 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 8.2e-77 292.0 446 41.7
CSS0037660 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 7.7e-75 285.4 415 42.4
SHI22466 Sapria himalayana HOM05D003622 ORTHO05D004453 5.7e-70 269.2 471 38.2
BcaC02g09475 Brassica carinata HOM05D003622 ORTHO05D004453 5.0e-66 256.1 378 40.7
Oeu055962.1 Olea europaea HOM05D003622 ORTHO05D004453 1.2e-64 251.5 307 49.2
Mapoly0024s0101 Marchantia polymorpha HOM05D003622 ORTHO05D004453 2.6e-62 243.8 481 35.8
Nn2g12120 Nelumbo nucifera HOM05D003622 ORTHO05D004453 9.2e-60 235.3 292 45.2
SEGI_29075 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 2.3e-58 230.7 492 34.1
SMO351G0297 Selaginella moellendorffii HOM05D003622 ORTHO05D004453 1.1e-52 211.8 452 33.6
Pp3c9_20660 Physcomitrium patens HOM05D003622 ORTHO05D004453 3.2e-52 210.3 462 31.4
Pp3c15_17690 Physcomitrium patens HOM05D003622 ORTHO05D004453 5.4e-52 209.5 462 32.5
BcaC02g09474 Brassica carinata HOM05D003622 ORTHO05D004453 8.0e-48 195.7 448 32.6
BolC4t25899H Brassica oleracea HOM05D003622 ORTHO05D004453 4.6e-43 179.9 183 50.8
BraA04t16629Z Brassica rapa HOM05D003622 ORTHO05D004453 1.1e-41 175.3 190 48.9
CBR_g27935 Chara braunii HOM05D000019 ORTHO05D000048 4.3e-41 173.3 581 26.9
HPP92_000465 Vanilla planifolia HOM05D003622 ORTHO05D004453 7.5e-38 162.5 196 43.4
Oeu052177.3 Olea europaea HOM05D003622 ORTHO05D004453 1.4e-36 158.3 340 35.9
MBI13_g36807_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 7.1e-36 156.0 120 60.8
AagrBONN_evm.TU.Sc2ySwM_344.2256 Anthoceros agrestis HOM05D003622 ORTHO05D004453 8.6e-34 149.1 302 36.1
Actinidia38718 Actinidia chinensis HOM05D003622 ORTHO05D004453 1.8e-31 141.4 156 47.4
HPP92_000473 Vanilla planifolia HOM05D003622 ORTHO05D004453 4.4e-30 136.7 244 37.3
TAR383G0647 Trochodendron aralioides HOM05D003622 ORTHO05D004453 9.9e-30 135.6 197 42.1
SEGI_04910 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 1.6e-11 75.1 99 44.4
MBI13_g02370_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 1.4e-07 62.0 87 36.8
SEGI_39442 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 5.3e-07 60.1 206 25.7
MBI13_g36809_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D240810 9.9e-06 55.8 40 60.0


User provided reference genes

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