Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_747.g21960 Utricularia gibba HOM05D007000 ORTHO05D009020 0.0e+00 1558.1 812 100.0
MSTRG.18732 Avicennia marina HOM05D007000 ORTHO05D009020 1.0e-268 930.2 786 60.8
Migut.D02336 Erythranthe guttata HOM05D007000 ORTHO05D009020 7.0e-265 917.5 779 62.0
Solyc11g066870.3 Solanum lycopersicum HOM05D007000 ORTHO05D009020 6.2e-261 904.4 772 61.3
Sopen11g026580 Solanum pennellii HOM05D007000 ORTHO05D009020 1.8e-260 902.9 774 61.1
PGSC0003DMG400026534 Solanum tuberosum HOM05D007000 ORTHO05D009020 9.8e-259 897.1 768 61.8
Oeu050179.1 Olea europaea HOM05D007000 ORTHO05D009020 2.5e-254 882.5 782 61.0
CAN.G644.32 Capsicum annuum HOM05D007000 ORTHO05D009020 1.8e-252 876.3 779 58.0
Dinv12525 Davidia involucrata HOM05D007000 ORTHO05D009020 1.5e-251 873.2 744 62.2
CSS0049563 Camellia sinensis var. sinensis HOM05D007000 ORTHO05D009020 2.6e-251 872.5 600 70.7
Nitab4.5_0001453g0060 Nicotiana tabacum HOM05D007000 ORTHO05D009020 7.5e-251 870.9 752 61.2
QL01p013748 Quercus lobata HOM05D007000 ORTHO05D009020 1.7e-250 869.8 726 62.5
Potri.009G149100 Populus trichocarpa HOM05D007000 ORTHO05D009020 1.9e-249 866.3 701 63.8
Gohir.A07G107200 Gossypium hirsutum HOM05D007000 ORTHO05D009020 4.6e-248 861.7 778 60.5
Gorai.001G119400 Gossypium raimondii HOM05D007000 ORTHO05D009020 1.1e-246 857.1 779 59.9
Sed0022610 Sechium edule HOM05D007000 ORTHO05D009020 1.5e-246 856.7 782 58.1
GSVIVG01031401001 Vitis vinifera HOM05D007000 ORTHO05D009020 1.5e-246 856.7 792 58.6
ClCG02G021900 Citrullus lanatus HOM05D007000 ORTHO05D009020 2.8e-245 852.4 702 63.5
MD03G1134600 Malus domestica HOM05D007000 ORTHO05D009020 2.8e-245 852.4 779 58.8
PGR119G0747 Punica granatum HOM05D007000 ORTHO05D009020 2.3e-244 849.4 733 62.5
Sabra09G0117700 Salix brachista HOM05D007000 ORTHO05D009020 8.9e-244 847.4 697 63.0
Gohir.D07G111200 Gossypium hirsutum HOM05D007000 ORTHO05D009020 1.2e-243 847.0 777 59.6
Prupe.6G118900 Prunus persica HOM05D007000 ORTHO05D009020 1.2e-243 847.0 733 61.1
Gorai.001G119500 Gossypium raimondii HOM05D007000 ORTHO05D009020 1.5e-243 846.7 777 59.7
FAN21G0141 Fragaria x ananassa HOM05D007000 ORTHO05D009020 2.0e-243 846.3 730 61.4
Cc01_g09830 Coffea canephora HOM05D007000 ORTHO05D009020 2.6e-243 845.9 776 59.3
RcHm_v2.0_Chr5g0055251 Rosa chinensis HOM05D007000 ORTHO05D009020 2.6e-243 845.9 727 60.4
Nitab4.5_0007303g0050 Nicotiana tabacum HOM05D007000 ORTHO05D009020 3.4e-243 845.5 809 57.0
Eucgr.J00424 Eucalyptus grandis HOM05D007000 ORTHO05D009020 5.8e-243 844.7 682 64.5
Gohir.A07G107100 Gossypium hirsutum HOM05D007000 ORTHO05D009020 6.4e-242 841.3 780 59.1
FvH4_3g29910 Fragaria vesca HOM05D007000 ORTHO05D009020 1.1e-241 840.5 778 57.5
FAN11G3012 Fragaria x ananassa HOM05D007000 ORTHO05D009020 1.1e-241 840.5 778 57.5
CiPaw.14G103700 Carya illinoinensis HOM05D007000 ORTHO05D009020 9.2e-241 837.4 701 61.2
TAR623G0382 Trochodendron aralioides HOM05D007000 ORTHO05D009020 2.7e-240 835.9 784 56.8
Sp6g22700 Schrenkiella parvula HOM05D007000 ORTHO05D009020 4.6e-240 835.1 743 59.8
TWI75G0014 Tripterygium wilfordii HOM05D007000 ORTHO05D009020 6.0e-240 834.7 754 59.8
Nn6g35052 Nelumbo nucifera HOM05D007000 ORTHO05D009020 1.3e-239 833.6 719 60.2
Thhalv10012645m.g Eutrema salsugineum HOM05D007000 ORTHO05D009020 3.9e-239 832.0 771 59.3
CARHR190940 Cardamine hirsuta HOM05D007000 ORTHO05D009020 5.1e-239 831.6 773 58.9
AL6G33670 Arabidopsis lyrata HOM05D007000 ORTHO05D009020 1.1e-238 830.5 742 58.4
BraA10t43904Z Brassica rapa HOM05D007000 ORTHO05D009020 1.9e-238 829.7 750 60.0
Sc12g0004140 Simmondsia chinensis HOM05D007000 ORTHO05D009020 1.6e-237 826.6 668 63.3
CANSAT54G2429 Cannabis sativa HOM05D007000 ORTHO05D009020 2.1e-237 826.2 699 62.1
A10p18280 Brassica napus HOM05D007000 ORTHO05D009020 2.8e-237 825.9 759 59.0
Duzib150G0107 Durio zibethinus HOM05D007000 ORTHO05D009020 4.7e-237 825.1 742 61.1
Carub.0006s2036 Capsella rubella HOM05D007000 ORTHO05D009020 6.2e-237 824.7 696 62.2
Aa31LG1G12980 Aethionema arabicum HOM05D007000 ORTHO05D009020 1.8e-236 823.2 708 62.0
AT5G22640 Arabidopsis thaliana HOM05D007000 ORTHO05D009020 1.8e-236 823.2 746 59.0
BolC9t58265H Brassica oleracea HOM05D007000 ORTHO05D009020 2.4e-236 822.8 758 59.2
C09p53930 Brassica napus HOM05D007000 ORTHO05D009020 6.8e-236 821.2 539 69.6
FAN16G1383 Fragaria x ananassa HOM05D007000 ORTHO05D009020 2.9e-234 815.8 799 56.8
BcaB08g36412 Brassica carinata HOM05D007000 ORTHO05D009020 2.4e-233 812.8 690 62.8
Manes.04G009000 Manihot esculenta HOM05D007000 ORTHO05D009020 1.6e-232 810.1 720 59.4
DCAR_012163 Daucus carota HOM05D007000 ORTHO05D009020 3.3e-230 802.4 769 54.5
AUR62038302 Chenopodium quinoa HOM05D007000 ORTHO05D009020 9.6e-230 800.8 772 54.9
Ciclev10027793m.g Citrus clementina HOM05D007000 ORTHO05D009020 6.2e-229 798.1 745 56.6
AUR62023939 Chenopodium quinoa HOM05D007000 ORTHO05D009020 8.1e-229 797.7 546 67.0
CsaV3_6G014720 Cucumis sativus L. HOM05D007000 ORTHO05D009020 2.0e-227 793.1 778 56.7
SGA_v2.0_scaffold193G40708 Striga asiatica HOM05D007000 ORTHO05D009020 3.4e-227 792.3 786 57.6
COL.COLO4_19295 Corchorus olitorius HOM05D007000 ORTHO05D009020 5.8e-227 791.6 668 62.6
CDE02G4201 Ceratophyllum demersum HOM05D007000 ORTHO05D009020 2.9e-226 789.3 759 55.6
MELO3C021453.2 Cucumis melo HOM05D007000 ORTHO05D009020 1.4e-225 786.9 718 56.5
Aqoxy1G00944 Aquilegia oxysepala HOM05D007000 ORTHO05D009020 1.2e-224 783.9 794 53.8
PSO339G5428 Papaver somniferum HOM05D007000 ORTHO05D009020 1.7e-223 780.0 709 57.1
PSO063G0097 Papaver somniferum HOM05D007000 ORTHO05D009020 3.3e-222 775.8 655 61.2
Lj1A221T47 Lonicera japonica HOM05D007000 ORTHO05D009020 1.3e-221 773.9 774 55.7
Lj3g0010220 Lotus japonicus HOM05D007000 ORTHO05D009020 3.6e-221 772.3 687 60.1
EL10Ac9g21077 Beta vulgaris HOM05D007000 ORTHO05D009020 2.4e-220 769.6 760 55.9
ATR0820G103 Amborella trichopoda HOM05D007000 ORTHO05D009020 9.0e-220 767.7 746 55.0
Lalb_Chr24g0395131 Lupinus albus HOM05D007000 ORTHO05D009020 1.5e-219 766.9 698 57.0
ECA238G2375 Erigeron canadensis HOM05D007000 ORTHO05D009020 2.2e-218 763.1 792 53.7
HanXRQChr14g0451961 Helianthus annuus HOM05D007000 ORTHO05D009020 1.1e-217 760.8 783 51.2
Lsat_1_v5_gn_2_96400 Lactuca sativa HOM05D007000 ORTHO05D009020 2.4e-217 759.6 522 66.3
Hund00783 Selenicereus undatus HOM05D007000 ORTHO05D009020 4.8e-213 745.3 734 54.4
Ah.01g004600 Amaranthus hybridus HOM05D007000 ORTHO05D009020 4.0e-212 742.3 716 56.0
Glyma.12G181600 Glycine max HOM05D007000 ORTHO05D009020 5.3e-212 741.9 737 54.4
Glyma.13G319300 Glycine max HOM05D007000 ORTHO05D009020 1.2e-211 740.7 752 54.4
Phvul.005G127300 Phaseolus vulgaris HOM05D007000 ORTHO05D009020 1.0e-210 737.6 711 57.1
VMungo1080G1560 Vigna mungo HOM05D007000 ORTHO05D009020 8.7e-207 724.5 704 55.0
arahy.Tifrunner.gnm1.ann1.0Z9K9L Arachis hypogaea HOM05D007000 ORTHO05D009020 2.5e-206 723.0 591 61.1
arahy.Tifrunner.gnm1.ann1.K5NCJW Arachis hypogaea HOM05D007000 ORTHO05D009020 1.3e-205 720.7 609 59.6
Ca_01679_v3 Cicer arietinum L. HOM05D007000 ORTHO05D009020 3.2e-201 706.1 705 55.0
Medtr2g084835 Medicago truncatula HOM05D007000 ORTHO05D009020 9.3e-201 704.5 657 54.6
FAN16G0383 Fragaria x ananassa HOM05D007000 ORTHO05D009020 7.9e-200 701.4 863 49.7
TPR.G32364 Trifolium pratense HOM05D007000 ORTHO05D009020 2.3e-191 673.3 763 49.8
Psat5g254800 Pisum sativum HOM05D007000 ORTHO05D009020 2.1e-184 650.2 668 52.5
Thecc.09G291900 Theobroma cacao HOM05D007000 ORTHO05D009020 5.5e-169 599.0 522 63.0
Peaxi162Scf00789g00534 Petunia axillaris HOM05D007000 ORTHO05D009020 3.5e-163 579.7 557 55.7
HPP92_011511 Vanilla planifolia HOM05D007000 ORTHO05D009020 8.3e-149 531.9 330 70.9
Pp3c14_2260 Physcomitrium patens HOM05D007000 ORTHO05D009020 2.4e-148 530.4 493 53.3
Actinidia37100 Actinidia chinensis HOM05D007000 ORTHO05D009020 6.6e-146 522.3 821 41.5
Haze_23451 Corylus avellana HOM05D007000 ORTHO05D009020 1.1e-145 521.5 403 61.8
Mapoly0021s0145 Marchantia polymorpha HOM05D007000 ORTHO05D009020 4.4e-142 509.6 562 46.6
SEGI_23936 Sequoiadendron giganteum HOM05D007000 ORTHO05D009020 1.0e-130 471.9 495 48.3
Gohir.D07G111100 Gossypium hirsutum HOM05D007000 ORTHO05D009020 1.9e-129 467.6 577 50.4
HPP92_011563 Vanilla planifolia HOM05D007000 ORTHO05D009020 1.1e-121 441.8 262 73.3
Atru.chr3.3385 Acer truncatum HOM05D007000 ORTHO05D009020 4.9e-117 426.4 475 52.2
ScUNg0001440 Simmondsia chinensis HOM05D007000 ORTHO05D009020 5.1e-114 416.4 395 58.7
AagrBONN_evm.TU.Sc2ySwM_344.1665 Anthoceros agrestis HOM05D007000 ORTHO05D009020 6.2e-104 382.9 346 51.7
HPP92_011520 Vanilla planifolia HOM05D007000 ORTHO05D009020 1.9e-97 361.3 419 47.0
Atru.chr3.3384 Acer truncatum HOM05D007000 ORTHO05D009020 2.6e-86 324.3 188 76.1
Peaxi162Scf00789g00535 Petunia axillaris HOM05D007000 ORTHO05D009020 2.3e-82 311.2 196 73.5
Cpa.g.sc47.64 Carica papaya HOM05D007000 ORTHO05D009020 5.3e-79 300.1 333 48.3
Oeu050178.1 Olea europaea HOM05D007000 ORTHO05D009020 7.9e-75 286.2 415 48.0
MD11G1157100 Malus domestica HOM05D007000 ORTHO05D009020 6.3e-72 276.6 513 42.9
BcaC04g19594 Brassica carinata HOM05D007000 ORTHO05D009020 1.0e-66 259.2 182 66.5
Cpa.g.sc47.63 Carica papaya HOM05D007000 ORTHO05D009020 6.1e-35 153.7 265 49.4
CBR_g22485 Chara braunii HOM05D000019 ORTHO05D000048 5.4e-31 140.6 392 29.8
TWI75G1888 Tripterygium wilfordii HOM05D007893 ORTHO05D010042 1.0e-29 136.3 117 59.0
Actinidia35447 Actinidia chinensis HOM05D007000 ORTHO05D009020 4.3e-28 131.0 78 71.8
HPP92_011562 Vanilla planifolia HOM05D007000 ORTHO05D009020 7.5e-17 93.6 109 43.1
SEGI_03022 Sequoiadendron giganteum HOM05D007000 ORTHO05D009020 6.4e-16 90.5 72 50.0
Aqoxy5G03114 Aquilegia oxysepala HOM05D003707 ORTHO05D004309 1.2e-14 86.3 76 53.9
Actinidia27040 Actinidia chinensis HOM05D007000 ORTHO05D030830 1.7e-08 65.9 231 33.3


User provided reference genes

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