Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_747.g21931 Utricularia gibba HOM05D000029 ORTHO05D006401 2.9e-79 298.5 153 100.0
Oeu005614.1 Olea europaea HOM05D000029 ORTHO05D006401 7.8e-24 114.4 129 51.2
MSTRG.16377 Avicennia marina HOM05D000029 ORTHO05D006401 1.9e-22 109.8 129 51.2
arahy.Tifrunner.gnm1.ann1.6AWZ5A Arachis hypogaea HOM05D000029 ORTHO05D006401 3.3e-22 109.0 130 45.4
ECA238G1788 Erigeron canadensis HOM05D000029 ORTHO05D006401 4.3e-22 108.6 153 45.1
arahy.Tifrunner.gnm1.ann1.RQ5X65 Arachis hypogaea HOM05D000029 ORTHO05D006401 6.2e-21 104.8 130 43.8
HanXRQChr14g0439051 Helianthus annuus HOM05D000029 ORTHO05D006401 1.4e-20 103.6 129 51.9
Rhsim13G0135700 Rhododendron simsii HOM05D000029 ORTHO05D006401 1.8e-20 103.2 130 47.7
Lalb_Chr07g0188161 Lupinus albus HOM05D000029 ORTHO05D006401 4.0e-20 102.1 111 48.6
Lj4g0021260 Lotus japonicus HOM05D000029 ORTHO05D006401 5.2e-20 101.7 114 51.8
Lj1C1151T7 Lonicera japonica HOM05D000029 ORTHO05D006401 8.9e-20 100.9 111 47.7
Manes.03G072200 Manihot esculenta HOM05D000029 ORTHO05D006401 1.2e-19 100.5 108 54.6
vmacro03567 Vaccinium macrocarpon HOM05D000029 ORTHO05D006401 2.6e-19 99.4 118 48.3
VMungo0251G0927 Vigna mungo HOM05D000029 ORTHO05D006401 2.6e-19 99.4 128 44.5
Glyma.05G134800 Glycine max HOM05D000029 ORTHO05D006401 3.4e-19 99.0 130 43.8
Glyma.08G090000 Glycine max HOM05D000029 ORTHO05D006401 3.4e-19 99.0 130 43.8
Psat7g087280 Pisum sativum HOM05D000029 ORTHO05D006401 3.4e-19 99.0 131 41.2
Sed0025628 Sechium edule HOM05D000029 ORTHO05D006401 4.4e-19 98.6 125 47.2
TPR.G30930 Trifolium pratense HOM05D000029 ORTHO05D006401 4.4e-19 98.6 122 46.7
Phvul.002G187300 Phaseolus vulgaris HOM05D000029 ORTHO05D006401 7.5e-19 97.8 130 42.3
Medtr2g437730 Medicago truncatula HOM05D000029 ORTHO05D006401 2.2e-18 96.3 127 45.7
CSS0007663 Camellia sinensis var. sinensis HOM05D000029 ORTHO05D006401 3.7e-18 95.5 139 43.2
CANSAT56G2133 Cannabis sativa HOM05D000029 ORTHO05D006401 3.7e-18 95.5 130 46.2
Solyc05g007230.4 Solanum lycopersicum HOM05D000029 ORTHO05D006401 3.7e-18 95.5 78 65.4
PGSC0003DMG400023057 Solanum tuberosum HOM05D000029 ORTHO05D006401 3.7e-18 95.5 78 65.4
TPR.G27396 Trifolium pratense HOM05D000029 ORTHO05D006401 3.7e-18 95.5 118 42.4
Sopen05g003190 Solanum pennellii HOM05D000029 ORTHO05D006401 4.9e-18 95.1 78 65.4
Glyma.09G048300 Glycine max HOM05D000029 ORTHO05D006401 8.3e-18 94.4 126 45.2
CAN.G2055.3 Capsicum annuum HOM05D000029 ORTHO05D006401 1.1e-17 94.0 85 60.0
Cpa.g.sc30.81 Carica papaya HOM05D000029 ORTHO05D006401 1.1e-17 94.0 112 49.1
Ca_18218_v3 Cicer arietinum L. HOM05D000029 ORTHO05D006401 1.1e-17 94.0 127 40.9
Cc09_g04690 Coffea canephora HOM05D000029 ORTHO05D006401 1.1e-17 94.0 125 46.4
Lsat_1_v5_gn_2_59680 Lactuca sativa HOM05D000029 ORTHO05D006401 1.1e-17 94.0 154 43.5
Medtr4g094790 Medicago truncatula HOM05D000029 ORTHO05D006401 1.1e-17 94.0 115 43.5
Peaxi162Scf00326g00711 Petunia axillaris HOM05D000029 ORTHO05D006401 1.1e-17 94.0 83 62.7
SGA_v2.0_scaffold423G51457 Striga asiatica HOM05D000029 ORTHO05D006401 3.2e-17 92.4 76 61.8
Ca_02401_v3 Cicer arietinum L. HOM05D000029 ORTHO05D006401 4.1e-17 92.0 123 43.9
HanXRQChr04g0118881 Helianthus annuus HOM05D000029 ORTHO05D006401 4.1e-17 92.0 113 47.8
Nitab4.5_0004573g0020 Nicotiana tabacum HOM05D000029 ORTHO05D006401 4.1e-17 92.0 69 69.6
CSS0015123 Camellia sinensis var. sinensis HOM05D000029 ORTHO05D006401 5.4e-17 91.7 129 38.8
CiPaw.09G140000 Carya illinoinensis HOM05D000029 ORTHO05D006401 5.4e-17 91.7 116 48.3
AT4G20140 Arabidopsis thaliana HOM05D000029 ORTHO05D006401 7.1e-17 91.3 128 43.0
ClCG03G004070 Citrullus lanatus HOM05D000029 ORTHO05D006401 9.2e-17 90.9 128 43.0
PGR004G0705 Punica granatum HOM05D000029 ORTHO05D006401 9.2e-17 90.9 137 43.8
Sabra03G0113200 Salix brachista HOM05D000029 ORTHO05D006401 9.2e-17 90.9 108 47.2
MELO3C002389.2 Cucumis melo HOM05D000029 ORTHO05D006401 3.5e-16 89.0 128 42.2
Psat1g151320 Pisum sativum HOM05D000029 ORTHO05D006401 3.5e-16 89.0 129 38.8
Eucgr.D00003 Eucalyptus grandis HOM05D000029 ORTHO05D006401 6.0e-16 88.2 124 44.4
Potri.003G156200 Populus trichocarpa HOM05D000029 ORTHO05D006401 6.0e-16 88.2 108 47.2
arahy.Tifrunner.gnm1.ann1.JNH43Q Arachis hypogaea HOM05D000029 ORTHO05D006401 7.8e-16 87.8 110 45.5
CARHR226970 Cardamine hirsuta HOM05D000029 ORTHO05D006401 7.8e-16 87.8 128 42.2
GSVIVG01010078001 Vitis vinifera HOM05D000029 ORTHO05D006401 7.8e-16 87.8 99 51.5
Ciclev10014061m.g Citrus clementina HOM05D000029 ORTHO05D006401 1.0e-15 87.4 113 45.1
CsaV3_1G009960 Cucumis sativus L. HOM05D000029 ORTHO05D006401 1.0e-15 87.4 101 50.5
Atru.chr10.246 Acer truncatum HOM05D000029 ORTHO05D006401 1.3e-15 87.0 113 44.2
Carub.0007s2099 Capsella rubella HOM05D000029 ORTHO05D006401 1.3e-15 87.0 109 46.8
Haze_05195 Corylus avellana HOM05D000029 ORTHO05D006401 1.3e-15 87.0 113 44.2
Ah.11g039620 Amaranthus hybridus HOM05D000029 ORTHO05D006401 1.7e-15 86.7 118 45.8
arahy.Tifrunner.gnm1.ann1.I1LE43 Arachis hypogaea HOM05D000029 ORTHO05D006401 1.7e-15 86.7 110 44.5
Cfa001156 Carpinus fangiana HOM05D000029 ORTHO05D006401 1.7e-15 86.7 113 44.2
DCAR_001259 Daucus carota HOM05D000029 ORTHO05D006401 1.7e-15 86.7 129 38.0
Potri.001G075000 Populus trichocarpa HOM05D000029 ORTHO05D006401 1.7e-15 86.7 114 44.7
Thecc.02G001700 Theobroma cacao HOM05D000029 ORTHO05D006401 1.7e-15 86.7 129 39.5
C01p14090 Brassica napus HOM05D000029 ORTHO05D006401 3.0e-15 85.9 80 55.0
BolC1t01377H Brassica oleracea HOM05D000029 ORTHO05D006401 3.0e-15 85.9 80 55.0
Nitab4.5_0000217g0100 Nicotiana tabacum HOM05D000029 ORTHO05D006401 3.0e-15 85.9 69 66.7
AL7G33680 Arabidopsis lyrata HOM05D000029 ORTHO05D006401 5.1e-15 85.1 109 46.8
BraA01t01131Z Brassica rapa HOM05D000029 ORTHO05D006401 5.1e-15 85.1 80 53.8
Prupe.4G120100 Prunus persica HOM05D000029 ORTHO05D006401 6.6e-15 84.7 122 43.4
TWI15G0373 Tripterygium wilfordii HOM05D000029 ORTHO05D006401 6.6e-15 84.7 109 43.1
FAN16G0872 Fragaria x ananassa HOM05D000029 ORTHO05D006401 8.6e-15 84.3 124 37.9
FAN25G2567 Fragaria x ananassa HOM05D000029 ORTHO05D006401 8.6e-15 84.3 125 42.4
TWI38G2399 Tripterygium wilfordii HOM05D000029 ORTHO05D006401 8.6e-15 84.3 126 40.5
Duzib132G0337 Durio zibethinus HOM05D000029 ORTHO05D006401 1.1e-14 84.0 129 39.5
Glyma.15G155600 Glycine max HOM05D000029 ORTHO05D006401 1.1e-14 84.0 111 44.1
VMungo1309G2739 Vigna mungo HOM05D000029 ORTHO05D006401 1.1e-14 84.0 111 42.3
FvH4_3g13270 Fragaria vesca HOM05D000029 ORTHO05D006401 1.5e-14 83.6 124 37.9
FAN11G3149 Fragaria x ananassa HOM05D000029 ORTHO05D006401 1.5e-14 83.6 124 37.9
AUR62035397 Chenopodium quinoa HOM05D000029 ORTHO05D006401 2.5e-14 82.8 109 48.6
Lalb_Chr15g0083681 Lupinus albus HOM05D000029 ORTHO05D006401 2.5e-14 82.8 91 52.7
RcHm_v2.0_Chr5g0021741 Rosa chinensis HOM05D000029 ORTHO05D006401 2.5e-14 82.8 124 38.7
A06p47000 Brassica napus HOM05D000029 ORTHO05D006401 3.3e-14 82.4 125 42.4
BraA06t27573Z Brassica rapa HOM05D000029 ORTHO05D006401 3.3e-14 82.4 125 42.4
MBI02_g32631_MAGBIO Magnolia biondii HOM05D000029 ORTHO05D006401 3.3e-14 82.4 107 42.1
Sc24g0002850 Simmondsia chinensis HOM05D000029 ORTHO05D006401 4.3e-14 82.0 112 46.4
A01p11890 Brassica napus HOM05D000029 ORTHO05D006401 5.6e-14 81.6 80 52.5
QL11p010985 Quercus lobata HOM05D000029 ORTHO05D006401 7.3e-14 81.3 113 43.4
Migut.M02029 Erythranthe guttata HOM05D000029 ORTHO05D006401 9.5e-14 80.9 135 43.7
COL.COLO4_25034 Corchorus olitorius HOM05D000029 ORTHO05D006401 1.2e-13 80.5 128 39.1
PSO675G7611 Papaver somniferum HOM05D000029 ORTHO05D006401 1.2e-13 80.5 112 40.2
FAN21G1010 Fragaria x ananassa HOM05D000029 ORTHO05D006401 1.6e-13 80.1 124 36.3
Sp7g18570 Schrenkiella parvula HOM05D000029 ORTHO05D006401 1.6e-13 80.1 125 40.8
Carub.0008s0356 Capsella rubella HOM05D000029 ORTHO05D006401 2.1e-13 79.7 119 40.3
MD05G1243600 Malus domestica HOM05D000029 ORTHO05D006401 2.1e-13 79.7 123 41.5
Aa31LG6G2550 Aethionema arabicum HOM05D000029 ORTHO05D006401 2.8e-13 79.3 81 53.1
BcaC06g34521 Brassica carinata HOM05D000029 ORTHO05D006401 2.8e-13 79.3 122 40.2
C07p27600 Brassica napus HOM05D000029 ORTHO05D006401 2.8e-13 79.3 122 40.2
BolC7t43293H Brassica oleracea HOM05D000029 ORTHO05D006401 2.8e-13 79.3 122 40.2
PSO541G2785 Papaver somniferum HOM05D000029 ORTHO05D006401 2.8e-13 79.3 112 39.3
BcaB07g30502 Brassica carinata HOM05D000029 ORTHO05D006401 3.6e-13 79.0 86 51.2
CDE02G3528 Ceratophyllum demersum HOM05D000029 ORTHO05D006401 3.6e-13 79.0 111 44.1
MD10G1225500 Malus domestica HOM05D000029 ORTHO05D006401 4.7e-13 78.6 120 42.5
Nn7g38414 Nelumbo nucifera HOM05D000029 ORTHO05D006401 6.2e-13 78.2 110 48.2
Aqoxy1G01386 Aquilegia oxysepala HOM05D000029 ORTHO05D006401 1.4e-12 77.0 69 56.5
Lj6g0014243 Lotus japonicus HOM05D000029 ORTHO05D006401 1.4e-12 77.0 119 37.8
Thhalv10027256m.g Eutrema salsugineum HOM05D000029 ORTHO05D006401 1.8e-12 76.6 125 40.0
THA.LOC104811897 Tarenaya hassleriana HOM05D000029 ORTHO05D006401 3.1e-12 75.9 61 63.9
Zm00001eb105400 Zea mays HOM05D000029 ORTHO05D006401 8.9e-12 74.3 113 43.4
AL8G14840 Arabidopsis lyrata HOM05D000029 ORTHO05D006401 1.2e-11 73.9 79 53.2
C02p45290 Brassica napus HOM05D000029 ORTHO05D006401 1.2e-11 73.9 109 41.3
BcaC03g16690 Brassica carinata HOM05D000029 ORTHO05D006401 1.5e-11 73.6 83 50.6
Sp2g09510 Schrenkiella parvula HOM05D000029 ORTHO05D006401 1.5e-11 73.6 126 36.5
AT5G44700 Arabidopsis thaliana HOM05D000029 ORTHO05D006401 2.6e-11 72.8 106 42.5
BcaC06g31594 Brassica carinata HOM05D000029 ORTHO05D006401 2.6e-11 72.8 122 36.1
Dinv17880 Davidia involucrata HOM05D000029 ORTHO05D006401 2.6e-11 72.8 75 50.7
Zm00001eb321900 Zea mays HOM05D000029 ORTHO05D006401 5.8e-11 71.6 68 57.4
CARHR178200 Cardamine hirsuta HOM05D000029 ORTHO05D006401 1.3e-10 70.5 106 39.6
AUR62041884 Chenopodium quinoa HOM05D000029 ORTHO05D006401 1.3e-10 70.5 108 41.7
Gohir.D12G048800 Gossypium hirsutum HOM05D000029 ORTHO05D006401 1.3e-10 70.5 80 47.5
Gohir.A12G050400 Gossypium hirsutum HOM05D000029 ORTHO05D006401 2.2e-10 69.7 83 45.8
Thhalv10000741m.g Eutrema salsugineum HOM05D000029 ORTHO05D006401 2.9e-10 69.3 127 31.5
Gorai.008G051700 Gossypium raimondii HOM05D000029 ORTHO05D006401 6.4e-10 68.2 47 66.0
EL10Ac9g22976 Beta vulgaris HOM05D000029 ORTHO05D006401 8.4e-10 67.8 60 55.0
Hund17804 Selenicereus undatus HOM05D000029 ORTHO05D006401 8.4e-10 67.8 126 37.3
Os07g0498400 Oryza sativa ssp. japonica HOM05D000029 ORTHO05D006401 3.2e-09 65.9 114 40.4
BolC2t10558H Brassica oleracea HOM05D000029 ORTHO05D006401 1.6e-08 63.5 55 54.5
A02p28540 Brassica napus HOM05D000029 ORTHO05D006401 3.5e-08 62.4 47 59.6
BraA02t07891Z Brassica rapa HOM05D000029 ORTHO05D006401 3.5e-08 62.4 47 59.6
Phvul.009G244600 Phaseolus vulgaris HOM05D000029 ORTHO05D006401 3.5e-08 62.4 45 57.8
Lj1g0010174 Lotus japonicus HOM05D000029 ORTHO05D006401 6.0e-08 61.6 72 45.8
TWI56G1352 Tripterygium wilfordii HOM05D000132 ORTHO05D000058 1.0e-07 60.8 121 34.7
Aa31LG9G8460 Aethionema arabicum HOM05D000029 ORTHO05D006401 1.7e-07 60.1 61 49.2
HPP92_010216 Vanilla planifolia HOM05D000029 ORTHO05D006401 2.3e-07 59.7 108 36.1
AUR62001376 Chenopodium quinoa HOM05D000094 ORTHO05D000455 3.0e-07 59.3 72 41.7
AUR62025592 Chenopodium quinoa HOM05D000094 ORTHO05D000455 3.0e-07 59.3 72 41.7
AUR62044635 Chenopodium quinoa HOM05D000094 ORTHO05D000455 3.0e-07 59.3 72 41.7
SEGI_16911 Sequoiadendron giganteum HOM05D000029 ORTHO05D006401 3.0e-07 59.3 130 39.2
TWI14G1192 Tripterygium wilfordii HOM05D000132 ORTHO05D000058 5.1e-07 58.5 123 35.8
Migut.D00902 Erythranthe guttata HOM05D000094 ORTHO05D000455 6.6e-07 58.2 109 33.0
Oeu025710.2 Olea europaea HOM05D000029 ORTHO05D002162 6.6e-07 58.2 109 32.1
CARHR114260 Cardamine hirsuta HOM05D000041 ORTHO05D000061 8.6e-07 57.8 120 35.0
Phvul.008G080000 Phaseolus vulgaris HOM05D000166 ORTHO05D001348 1.1e-06 57.4 103 35.0
SEGI_17722 Sequoiadendron giganteum HOM05D000029 ORTHO05D006401 1.1e-06 57.4 131 37.4
Ah.15g094760 Amaranthus hybridus HOM05D001506 ORTHO05D000455 1.5e-06 57.0 71 39.4
ATR0763G165 Amborella trichopoda HOM05D000029 ORTHO05D006401 1.5e-06 57.0 100 35.0
Psat4g208120 Pisum sativum HOM05D000094 ORTHO05D001056 1.5e-06 57.0 120 33.3
EL10Ac7g18234 Beta vulgaris HOM05D000094 ORTHO05D000455 1.9e-06 56.6 69 40.6
MBI02_g03074_MAGBIO Magnolia biondii HOM05D000029 ORTHO05D002162 1.9e-06 56.6 134 31.3
Gohir.A07G079475 Gossypium hirsutum HOM05D000041 ORTHO05D000061 3.3e-06 55.8 143 32.9
Gohir.A09G202000 Gossypium hirsutum HOM05D000029 ORTHO05D002162 3.3e-06 55.8 124 31.5
MD13G1009400 Malus domestica HOM05D000094 ORTHO05D000455 3.3e-06 55.8 105 32.4
Medtr7g015310 Medicago truncatula HOM05D000041 ORTHO05D000061 3.3e-06 55.8 108 33.3
Cc03_g07160 Coffea canephora HOM05D000029 ORTHO05D002162 4.3e-06 55.5 108 28.7
Dinv00834 Davidia involucrata HOM05D000132 ORTHO05D000058 4.3e-06 55.5 128 29.7
Dinv14320 Davidia involucrata HOM05D000132 ORTHO05D000058 4.3e-06 55.5 128 32.0
Manes.15G049300 Manihot esculenta HOM05D000029 ORTHO05D002162 4.3e-06 55.5 112 31.2
PGR042G2501 Punica granatum HOM05D000029 ORTHO05D002162 4.3e-06 55.5 133 30.8
TWI14G0236 Tripterygium wilfordii HOM05D000132 ORTHO05D000058 4.3e-06 55.5 131 32.1
TWI14G1370 Tripterygium wilfordii HOM05D000132 ORTHO05D000058 4.3e-06 55.5 131 32.1
TWI56G0767 Tripterygium wilfordii HOM05D000132 ORTHO05D000058 4.3e-06 55.5 129 31.0
TAR633G2282 Trochodendron aralioides HOM05D000094 ORTHO05D001056 4.3e-06 55.5 123 31.7
Gorai.006G219400 Gossypium raimondii HOM05D000029 ORTHO05D002162 5.6e-06 55.1 124 30.6
Lalb_Chr02g0149301 Lupinus albus HOM05D000029 ORTHO05D002162 5.6e-06 55.1 99 34.3
Phvul.010G035800 Phaseolus vulgaris HOM05D000094 ORTHO05D001056 5.6e-06 55.1 124 32.3
Prupe.1G343200 Prunus persica HOM05D000094 ORTHO05D000455 5.6e-06 55.1 105 35.2
TAR624G0480 Trochodendron aralioides HOM05D000029 ORTHO05D006401 5.6e-06 55.1 40 67.5
Ca_27159_v3 Cicer arietinum L. HOM05D000029 ORTHO05D002162 7.3e-06 54.7 109 30.3
Eucgr.A01352 Eucalyptus grandis HOM05D000132 ORTHO05D000058 7.3e-06 54.7 70 38.6
Lalb_Chr18g0044811 Lupinus albus HOM05D000094 ORTHO05D000455 7.3e-06 54.7 54 44.4
Prupe.1G057600 Prunus persica HOM05D000029 ORTHO05D002162 7.3e-06 54.7 134 28.4
CSS0001808 Camellia sinensis var. sinensis HOM05D000029 ORTHO05D002162 9.6e-06 54.3 108 30.6
Gohir.D09G196000 Gossypium hirsutum HOM05D000029 ORTHO05D002162 9.6e-06 54.3 124 30.6
Lsat_1_v5_gn_5_176421 Lactuca sativa HOM05D000094 ORTHO05D001056 9.6e-06 54.3 125 32.0
Lj1g0013037 Lotus japonicus HOM05D000094 ORTHO05D000455 9.6e-06 54.3 114 34.2
Medtr8g010180 Medicago truncatula HOM05D000094 ORTHO05D001056 9.6e-06 54.3 120 33.3
Nitab4.5_0001691g0040 Nicotiana tabacum HOM05D000872 ORTHO05D000455 9.6e-06 54.3 128 30.5
Nitab4.5_0002885g0040 Nicotiana tabacum HOM05D000872 ORTHO05D000455 9.6e-06 54.3 128 30.5
TWI56G0287 Tripterygium wilfordii HOM05D000132 ORTHO05D000058 9.6e-06 54.3 123 32.5


User provided reference genes

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