Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_747.g21912 Utricularia gibba HOM05D008104 ORTHO05D010240 1.5e-30 135.6 69 100.0
Peaxi162Scf00045g01230 Petunia axillaris HOM05D008104 ORTHO05D010240 1.4e-28 129.0 69 94.2
Nitab4.5_0004379g0010 Nicotiana tabacum HOM05D008104 ORTHO05D010240 6.8e-28 126.7 67 94.0
CAN.G1214.6 Capsicum annuum HOM05D008104 ORTHO05D010240 1.2e-27 125.9 69 89.9
Sc07g0008300 Simmondsia chinensis HOM05D008104 ORTHO05D010240 2.0e-27 125.2 69 91.3
Solyc08g074750.2 Solanum lycopersicum HOM05D008104 ORTHO05D010240 4.4e-27 124.0 69 89.9
Sopen08g023350 Solanum pennellii HOM05D008104 ORTHO05D010240 4.4e-27 124.0 69 89.9
Migut.A00503 Erythranthe guttata HOM05D008104 ORTHO05D010240 9.9e-27 122.9 68 89.7
ECA240G1292 Erigeron canadensis HOM05D008104 ORTHO05D010240 1.3e-26 122.5 69 88.4
HanXRQChr13g0411531 Helianthus annuus HOM05D008104 ORTHO05D010240 2.2e-26 121.7 69 89.9
Hund14319 Selenicereus undatus HOM05D008104 ORTHO05D010240 2.9e-26 121.3 69 87.0
arahy.Tifrunner.gnm1.ann1.N8H2I0 Arachis hypogaea HOM05D008104 ORTHO05D010240 3.8e-26 120.9 67 88.1
arahy.Tifrunner.gnm1.ann1.QYL8CN Arachis hypogaea HOM05D008104 ORTHO05D010240 3.8e-26 120.9 67 88.1
Lalb_Chr05g0215341 Lupinus albus HOM05D008104 ORTHO05D010240 4.9e-26 120.6 69 85.5
Ah.12g056100 Amaranthus hybridus HOM05D008104 ORTHO05D010240 6.4e-26 120.2 69 87.0
Phvul.002G125300 Phaseolus vulgaris HOM05D008104 ORTHO05D010240 8.4e-26 119.8 69 85.5
SalBow8G4418 Salvia bowleyana HOM05D008104 ORTHO05D010240 8.4e-26 119.8 67 85.1
Lj2g0017308 Lotus japonicus HOM05D008104 ORTHO05D010240 1.1e-25 119.4 69 85.5
AUR62007436 Chenopodium quinoa HOM05D008104 ORTHO05D010240 2.4e-25 118.2 69 85.5
AUR62027302 Chenopodium quinoa HOM05D008104 ORTHO05D010240 2.4e-25 118.2 69 85.5
Lsat_1_v5_gn_5_60680 Lactuca sativa HOM05D008104 ORTHO05D010240 3.2e-25 117.9 69 84.1
MELO3C016253.2 Cucumis melo HOM05D008104 ORTHO05D010240 4.1e-25 117.5 67 86.6
Glyma.01G150600 Glycine max HOM05D008104 ORTHO05D010240 5.4e-25 117.1 69 82.6
Actinidia29331 Actinidia chinensis HOM05D008104 ORTHO05D010240 7.1e-25 116.7 69 82.6
EL10Ac5g11891 Beta vulgaris HOM05D008104 ORTHO05D010240 7.1e-25 116.7 69 84.1
Aqoxy7G04138 Aquilegia oxysepala HOM05D008104 ORTHO05D010240 9.2e-25 116.3 69 85.5
Dinv09435 Davidia involucrata HOM05D008104 ORTHO05D010240 1.2e-24 115.9 69 82.6
Glyma.09G215500 Glycine max HOM05D008104 ORTHO05D010240 1.2e-24 115.9 69 81.2
CiPaw.12G072700 Carya illinoinensis HOM05D008104 ORTHO05D010240 1.6e-24 115.5 69 84.1
Cc00_g10370 Coffea canephora HOM05D008104 ORTHO05D010240 1.6e-24 115.5 67 85.1
Zm00001eb246730 Zea mays HOM05D008104 ORTHO05D010240 2.1e-24 115.2 67 83.6
MBI04_g30773_MAGBIO Magnolia biondii HOM05D008104 ORTHO05D010240 2.7e-24 114.8 67 83.6
Sed0017262 Sechium edule HOM05D008104 ORTHO05D010240 2.7e-24 114.8 67 83.6
ClCG07G011300 Citrullus lanatus HOM05D008104 ORTHO05D010240 3.5e-24 114.4 67 85.1
Gohir.D08G168000 Gossypium hirsutum HOM05D008104 ORTHO05D010240 3.5e-24 114.4 69 84.1
Gorai.004G175200 Gossypium raimondii HOM05D008104 ORTHO05D010240 3.5e-24 114.4 69 84.1
ATR0829G147 Amborella trichopoda HOM05D008104 ORTHO05D010240 4.6e-24 114.0 67 85.1
Ca_25079_v3 Cicer arietinum L. HOM05D008104 ORTHO05D010240 4.6e-24 114.0 69 81.2
Hma1.2p1_1000F.1_g246475 Hydrangea macrophylla HOM05D008104 ORTHO05D010240 4.6e-24 114.0 69 81.2
Rhsim07G0174400 Rhododendron simsii HOM05D008104 ORTHO05D010240 4.6e-24 114.0 67 82.1
Gohir.A08G146900 Gossypium hirsutum HOM05D008104 ORTHO05D010240 6.0e-24 113.6 69 84.1
GSVIVG01036937001 Vitis vinifera HOM05D008104 ORTHO05D010240 1.3e-23 112.5 67 82.1
Medtr5g026530 Medicago truncatula HOM05D008104 ORTHO05D010240 1.7e-23 112.1 69 78.3
TPR.G17263 Trifolium pratense HOM05D008104 ORTHO05D010240 1.7e-23 112.1 69 79.7
Psat2g143360 Pisum sativum HOM05D008104 ORTHO05D010240 3.0e-23 111.3 69 79.7
Oeu028123.1 Olea europaea HOM05D008104 ORTHO05D010240 3.9e-23 110.9 72 80.6
HPP92_025511 Vanilla planifolia HOM05D008104 ORTHO05D010240 3.9e-23 110.9 69 82.6
HPP92_025524 Vanilla planifolia HOM05D008104 ORTHO05D010240 3.9e-23 110.9 69 82.6
Potri.001G129500 Populus trichocarpa HOM05D008104 ORTHO05D010240 8.6e-23 109.8 69 81.2
Atru.chr6.2114 Acer truncatum HOM05D008104 ORTHO05D010240 1.1e-22 109.4 69 81.2
Ciclev10003066m.g Citrus clementina HOM05D008104 ORTHO05D010240 2.5e-22 108.2 69 76.8
Manes.17G004800 Manihot esculenta HOM05D008104 ORTHO05D010240 3.3e-22 107.8 67 80.6
Prupe.5G017600 Prunus persica HOM05D008104 ORTHO05D010240 7.3e-22 106.7 69 75.4
CDE12G0204 Ceratophyllum demersum HOM05D008104 ORTHO05D010240 9.6e-22 106.3 67 80.6
SEGI_33559 Sequoiadendron giganteum HOM05D008104 ORTHO05D010240 9.6e-22 106.3 69 75.4
Thecc.03G324100 Theobroma cacao HOM05D008104 ORTHO05D010240 1.2e-21 105.9 69 78.3
RcHm_v2.0_Chr7g0214551 Rosa chinensis HOM05D008104 ORTHO05D010240 8.1e-21 103.2 69 72.5
FAN04G2889 Fragaria x ananassa HOM05D008104 ORTHO05D010240 1.4e-20 102.4 69 72.5
FAN08G1504 Fragaria x ananassa HOM05D008104 ORTHO05D010240 1.4e-20 102.4 69 72.5
SMO340G0105 Selaginella moellendorffii HOM05D008104 ORTHO05D010240 1.5e-19 99.0 67 71.6
Pp3c7_17130 Physcomitrium patens HOM05D008104 ORTHO05D010240 1.7e-18 95.5 64 68.8
Sabra01G0099800 Salix brachista HOM05D008104 ORTHO05D010240 4.6e-16 87.4 111 49.5
vmacro05083 Vaccinium macrocarpon HOM05D008104 ORTHO05D010240 1.3e-15 85.9 102 50.0
Sed0014176 Sechium edule HOM05D008104 ORTHO05D010240 2.3e-15 85.1 66 62.1
FvH4_5g24330 Fragaria vesca HOM05D008104 ORTHO05D010240 7.3e-14 80.1 51 78.4
Nitab4.5_0004477g0040 Nicotiana tabacum HOM05D008104 ORTHO05D010240 1.3e-13 79.3 42 97.6
Os02g0608700 Oryza sativa ssp. japonica HOM05D008104 ORTHO05D010240 3.6e-13 77.8 42 92.9
Nitab4.5_0000183g0120 Nicotiana tabacum HOM05D008104 ORTHO05D010240 4.0e-12 74.3 41 92.7
TWI60G0823 Tripterygium wilfordii HOM05D001576 ORTHO05D010240 1.3e-10 69.3 42 85.7
CDE01G0155 Ceratophyllum demersum HOM05D008104 ORTHO05D010240 6.4e-10 67.0 42 81.0
PGSC0003DMG400030069 Solanum tuberosum HOM05D000691 ORTHO05D000378 7.4e-06 53.5 29 82.8


User provided reference genes

Program Settings