Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_747.g21900 Utricularia gibba HOM05D005260 ORTHO05D006390 5.8e-77 290.8 146 100.0
unitig_0.g2819 Utricularia gibba HOM05D005260 ORTHO05D006390 4.8e-23 111.7 83 68.7
SGA_v2.0_scaffold265G46122 Striga asiatica HOM05D005260 ORTHO05D006390 7.2e-19 97.8 84 63.1
MSTRG.6120 Avicennia marina HOM05D005260 ORTHO05D006390 2.7e-18 95.9 75 64.0
Migut.J01331 Erythranthe guttata HOM05D005260 ORTHO05D006390 3.0e-17 92.4 75 64.0
SalBow1G8640 Salvia bowleyana HOM05D005260 ORTHO05D006390 3.3e-16 89.0 75 60.0
SGA_v2.0_scaffold45G17044 Striga asiatica HOM05D005260 ORTHO05D006390 9.1e-14 80.9 75 57.3
Rhsim01G0035700 Rhododendron simsii HOM05D005260 ORTHO05D006390 1.0e-12 77.4 82 52.4
QL02p092738 Quercus lobata HOM05D005260 ORTHO05D006390 1.7e-12 76.6 113 44.2
Actinidia04287 Actinidia chinensis HOM05D005260 ORTHO05D006390 2.9e-12 75.9 102 47.1
Oeu050475.1 Olea europaea HOM05D005260 ORTHO05D006390 2.9e-12 75.9 74 56.8
Rhsim01G0036000 Rhododendron simsii HOM05D005260 ORTHO05D006390 2.9e-12 75.9 77 55.8
Rhsim01G0045600 Rhododendron simsii HOM05D005260 ORTHO05D006390 2.9e-12 75.9 77 55.8
Nitab4.5_0001201g0060 Nicotiana tabacum HOM05D005260 ORTHO05D006390 8.5e-12 74.3 82 52.4
Nitab4.5_0008157g0020 Nicotiana tabacum HOM05D005260 ORTHO05D006390 8.5e-12 74.3 82 52.4
RhsimUnG0040000 Rhododendron simsii HOM05D005260 ORTHO05D006390 8.5e-12 74.3 77 54.5
CAN.G1116.9 Capsicum annuum HOM05D005260 ORTHO05D006390 1.1e-11 73.9 75 57.3
CSS0012073 Camellia sinensis var. sinensis HOM05D005260 ORTHO05D006390 1.5e-11 73.6 81 51.9
Medtr4g131190 Medicago truncatula HOM05D005260 ORTHO05D006390 1.5e-11 73.6 80 52.5
Hma1.2p1_0028F.1_g017400 Hydrangea macrophylla HOM05D005260 ORTHO05D006390 2.5e-11 72.8 78 53.8
Oeu051690.1 Olea europaea HOM05D005260 ORTHO05D006390 2.5e-11 72.8 77 51.9
Dinv42879 Davidia involucrata HOM05D005260 ORTHO05D006390 3.2e-11 72.4 81 51.9
Dinv43221 Davidia involucrata HOM05D005260 ORTHO05D006390 3.2e-11 72.4 81 51.9
TAR383G0874 Trochodendron aralioides HOM05D005260 ORTHO05D006390 4.2e-11 72.0 78 52.6
TAR625G1225 Trochodendron aralioides HOM05D005260 ORTHO05D006390 4.2e-11 72.0 78 52.6
Manes.14G111500 Manihot esculenta HOM05D005260 ORTHO05D006390 5.5e-11 71.6 75 53.3
Haze_19232 Corylus avellana HOM05D005260 ORTHO05D006390 7.2e-11 71.2 107 43.9
Sabra18G0092700 Salix brachista HOM05D005260 ORTHO05D006390 7.2e-11 71.2 82 48.8
Cfa020845 Carpinus fangiana HOM05D005260 ORTHO05D006390 9.4e-11 70.9 107 43.0
CDE02G0414 Ceratophyllum demersum HOM05D005260 ORTHO05D006390 9.4e-11 70.9 79 50.6
TWI34G1822 Tripterygium wilfordii HOM05D005260 ORTHO05D006390 1.2e-10 70.5 75 52.0
Eucgr.C02595 Eucalyptus grandis HOM05D005260 ORTHO05D006390 1.6e-10 70.1 75 56.0
Psat4g008640 Pisum sativum HOM05D005260 ORTHO05D006390 1.6e-10 70.1 75 52.0
Prupe.7G260500 Prunus persica HOM05D005260 ORTHO05D006390 1.6e-10 70.1 82 50.0
COL.COLO4_18779 Corchorus olitorius HOM05D005260 ORTHO05D006390 2.1e-10 69.7 84 52.4
FAN19G1826 Fragaria x ananassa HOM05D005260 ORTHO05D006390 2.1e-10 69.7 78 52.6
Potri.018G109800 Populus trichocarpa HOM05D005260 ORTHO05D006390 2.1e-10 69.7 82 47.6
Duzib150G0891 Durio zibethinus HOM05D005260 ORTHO05D006390 2.7e-10 69.3 67 53.7
Gohir.A13G184700 Gossypium hirsutum HOM05D005260 ORTHO05D006390 2.7e-10 69.3 67 53.7
RcHm_v2.0_Chr2g0085941 Rosa chinensis HOM05D005260 ORTHO05D006390 2.7e-10 69.3 76 53.9
Lalb_Chr13g0300941 Lupinus albus HOM05D005260 ORTHO05D006390 3.6e-10 68.9 74 55.4
Phvul.003G157300 Phaseolus vulgaris HOM05D005260 ORTHO05D006390 3.6e-10 68.9 79 45.6
FAN26G1108 Fragaria x ananassa HOM05D005260 ORTHO05D006390 6.1e-10 68.2 75 53.3
Gohir.D13G191100 Gossypium hirsutum HOM05D005260 ORTHO05D006390 6.1e-10 68.2 67 52.2
Gorai.013G217000 Gossypium raimondii HOM05D005260 ORTHO05D006390 6.1e-10 68.2 67 52.2
Peaxi162Scf00347g00088 Petunia axillaris HOM05D005260 ORTHO05D006390 6.1e-10 68.2 75 52.0
TPR.G9269 Trifolium pratense HOM05D005260 ORTHO05D006390 6.1e-10 68.2 75 53.3
Ca_21113_v3 Cicer arietinum L. HOM05D005260 ORTHO05D006390 8.0e-10 67.8 75 53.3
FAN23G1120 Fragaria x ananassa HOM05D005260 ORTHO05D006390 8.0e-10 67.8 75 53.3
Sopen07g001450 Solanum pennellii HOM05D005260 ORTHO05D006390 8.0e-10 67.8 75 53.3
Atru.chr6.1391 Acer truncatum HOM05D005260 ORTHO05D006390 1.0e-09 67.4 78 51.3
Atru.chr7.58 Acer truncatum HOM05D005260 ORTHO05D006390 1.0e-09 67.4 78 51.3
DCAR_020883 Daucus carota HOM05D005260 ORTHO05D006390 1.0e-09 67.4 81 50.6
Sc18g0000130 Simmondsia chinensis HOM05D005260 ORTHO05D006390 1.0e-09 67.4 83 49.4
Solyc07g005340.2 Solanum lycopersicum HOM05D005260 ORTHO05D006390 1.0e-09 67.4 75 53.3
Gorai.006G273400 Gossypium raimondii HOM05D005260 ORTHO05D006390 1.4e-09 67.0 74 48.6
Lsat_1_v5_gn_6_38260 Lactuca sativa HOM05D005260 ORTHO05D006390 1.4e-09 67.0 80 50.0
Thecc.09G033300 Theobroma cacao HOM05D005260 ORTHO05D006390 1.8e-09 66.6 67 53.7
BcaB05g22395 Brassica carinata HOM05D005260 ORTHO05D006390 2.3e-09 66.2 80 50.0
BraA10t43614Z Brassica rapa HOM05D005260 ORTHO05D006390 2.3e-09 66.2 74 54.1
Glyma.17G075400 Glycine max HOM05D005260 ORTHO05D006390 2.3e-09 66.2 76 47.4
PGSC0003DMG400003180 Solanum tuberosum HOM05D005260 ORTHO05D006390 2.3e-09 66.2 75 53.3
GSVIVG01023592001 Vitis vinifera HOM05D005260 ORTHO05D006390 2.3e-09 66.2 83 48.2
A10p16150 Brassica napus HOM05D005260 ORTHO05D006390 3.0e-09 65.9 80 51.2
CiPaw.15G174600 Carya illinoinensis HOM05D005260 ORTHO05D006390 4.0e-09 65.5 60 56.7
FAN28G1391 Fragaria x ananassa HOM05D005260 ORTHO05D006390 4.0e-09 65.5 74 52.7
Glyma.02G202400 Glycine max HOM05D005260 ORTHO05D006390 4.0e-09 65.5 73 49.3
PGR102G1636 Punica granatum HOM05D005260 ORTHO05D006390 4.0e-09 65.5 77 50.6
Cpa.g.sc46.130 Carica papaya HOM05D005260 ORTHO05D006390 5.2e-09 65.1 75 48.0
Duzib168G1964 Durio zibethinus HOM05D005260 ORTHO05D006390 5.2e-09 65.1 67 53.7
Actinidia38337 Actinidia chinensis HOM05D005260 ORTHO05D006390 6.7e-09 64.7 61 54.1
AL8G34120 Arabidopsis lyrata HOM05D005260 ORTHO05D006390 6.7e-09 64.7 80 48.8
AT5G58020 Arabidopsis thaliana HOM05D005260 ORTHO05D006390 6.7e-09 64.7 80 48.8
CiPaw.16G114800 Carya illinoinensis HOM05D005260 ORTHO05D006390 6.7e-09 64.7 80 48.8
Gohir.D07G030400 Gossypium hirsutum HOM05D005260 ORTHO05D006390 8.8e-09 64.3 86 45.3
Gorai.001G031600 Gossypium raimondii HOM05D005260 ORTHO05D006390 8.8e-09 64.3 86 45.3
Thhalv10013961m.g Eutrema salsugineum HOM05D005260 ORTHO05D006390 1.2e-08 63.9 74 51.4
Potri.006G186900 Populus trichocarpa HOM05D005260 ORTHO05D006390 1.2e-08 63.9 75 49.3
BcaC04g19916 Brassica carinata HOM05D005260 ORTHO05D006390 1.5e-08 63.5 80 50.0
C09p49880 Brassica napus HOM05D005260 ORTHO05D006390 1.5e-08 63.5 80 50.0
BolC9t57839H Brassica oleracea HOM05D005260 ORTHO05D006390 1.5e-08 63.5 80 50.0
CARHR271830 Cardamine hirsuta HOM05D005260 ORTHO05D006390 2.6e-08 62.8 74 50.0
MD15G1155100 Malus domestica HOM05D005260 ORTHO05D006390 2.6e-08 62.8 82 42.7
Aa31LG3G13860 Aethionema arabicum HOM05D005260 ORTHO05D006390 3.3e-08 62.4 73 50.7
BraA02t05877Z Brassica rapa HOM05D005260 ORTHO05D006390 3.3e-08 62.4 80 47.5
A02p08050 Brassica napus HOM05D005260 ORTHO05D006390 4.4e-08 62.0 80 46.2
Ciclev10008691m.g Citrus clementina HOM05D005260 ORTHO05D006390 4.4e-08 62.0 75 45.3
Sabra06G0141800 Salix brachista HOM05D005260 ORTHO05D006390 4.4e-08 62.0 79 46.8
Sabra06G0142800 Salix brachista HOM05D005260 ORTHO05D006390 4.4e-08 62.0 79 46.8
SHI04751 Sapria himalayana HOM05D005260 ORTHO05D006390 4.4e-08 62.0 77 46.8
BolC2t07483H Brassica oleracea HOM05D005260 ORTHO05D006390 5.7e-08 61.6 80 47.5
Carub.0008s1857 Capsella rubella HOM05D005260 ORTHO05D006390 7.5e-08 61.2 80 46.2
Cc06_g15200 Coffea canephora HOM05D005260 ORTHO05D006390 9.7e-08 60.8 74 47.3
Sp6g19700 Schrenkiella parvula HOM05D005260 ORTHO05D006390 9.7e-08 60.8 74 47.3
THA.LOC104817826 Tarenaya hassleriana HOM05D005260 ORTHO05D006390 9.7e-08 60.8 66 53.0
C02p13690 Brassica napus HOM05D005260 ORTHO05D006390 1.3e-07 60.5 80 46.2
THA.LOC104817828 Tarenaya hassleriana HOM05D005260 ORTHO05D006390 1.3e-07 60.5 85 44.7
Gohir.D09G249000 Gossypium hirsutum HOM05D005260 ORTHO05D006390 2.2e-07 59.7 63 50.8
ATR0739G050 Amborella trichopoda HOM05D005260 ORTHO05D006390 3.7e-07 58.9 75 48.0
Os06g0183900 Oryza sativa ssp. japonica HOM05D005260 ORTHO05D006390 3.7e-07 58.9 77 44.2
MELO3C010238.2 Cucumis melo HOM05D005260 ORTHO05D006390 4.8e-07 58.5 78 41.0
CsaV3_1G028770 Cucumis sativus L. HOM05D005260 ORTHO05D006390 4.8e-07 58.5 78 41.0
PSO170G6608 Papaver somniferum HOM05D005260 ORTHO05D006390 6.3e-07 58.2 62 53.2
VMungo1215G1942 Vigna mungo HOM05D005260 ORTHO05D006390 6.3e-07 58.2 60 48.3
Lj7P455T24 Lonicera japonica HOM05D005260 ORTHO05D006390 8.2e-07 57.8 48 58.3
ECA233G0390 Erigeron canadensis HOM05D005260 ORTHO05D006390 1.1e-06 57.4 79 45.6
AUR62031434 Chenopodium quinoa HOM05D005260 ORTHO05D006390 1.4e-06 57.0 96 39.6
PSO017G5909 Papaver somniferum HOM05D005260 ORTHO05D006390 1.8e-06 56.6 62 53.2
FvH4_1g01150 Fragaria vesca HOM05D005260 ORTHO05D006390 2.4e-06 56.2 75 46.7
MBI14_g37102_MAGBIO Magnolia biondii HOM05D005260 ORTHO05D006390 2.4e-06 56.2 75 45.3
Sed0012515 Sechium edule HOM05D005260 ORTHO05D006390 2.4e-06 56.2 78 41.0
ClCG06G015480 Citrullus lanatus HOM05D005260 ORTHO05D006390 3.1e-06 55.8 78 42.3
Ah.11g045050 Amaranthus hybridus HOM05D005260 ORTHO05D006390 5.3e-06 55.1 72 44.4
CBR_g44540 Chara braunii HOM05D005260 ORTHO05D006390 7.0e-06 54.7 60 43.3
HanXRQChr13g0397631 Helianthus annuus HOM05D005260 ORTHO05D006390 7.0e-06 54.7 58 51.7
AagrBONN_evm.TU.Sc2ySwM_228.4055 Anthoceros agrestis HOM05D005260 ORTHO05D006390 9.1e-06 54.3 66 40.9
Mapoly0043s0023 Marchantia polymorpha HOM05D005260 ORTHO05D006390 9.1e-06 54.3 81 39.5


User provided reference genes

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