Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_747.g21882 Utricularia gibba HOM05D003764 ORTHO05D004356 2.0e-258 895.2 439 100.0
unitig_699.g19216 Utricularia gibba HOM05D003764 ORTHO05D004356 5.2e-129 465.3 437 56.1
unitig_0.g1266 Utricularia gibba HOM05D003764 ORTHO05D004356 4.4e-128 462.2 438 53.4
unitig_699.g19217 Utricularia gibba HOM05D003764 ORTHO05D004356 9.7e-128 461.1 437 55.1
unitig_747.g21519 Utricularia gibba HOM05D003764 ORTHO05D004356 6.5e-116 421.8 422 51.4
SalBow7G4127 Salvia bowleyana HOM05D003764 ORTHO05D004356 8.0e-114 414.8 452 48.9
MSTRG.1112 Avicennia marina HOM05D003764 ORTHO05D004356 4.8e-111 405.6 427 50.4
Sopen12g031450 Solanum pennellii HOM05D003764 ORTHO05D004356 1.1e-110 404.4 383 50.9
Oeu035836.1 Olea europaea HOM05D003764 ORTHO05D004356 1.8e-110 403.7 449 47.2
Migut.C00949 Erythranthe guttata HOM05D003764 ORTHO05D004356 1.2e-109 401.0 398 49.7
SGA_v2.0_scaffold275G46585 Striga asiatica HOM05D003764 ORTHO05D004356 2.0e-109 400.2 438 48.4
Solyc12g094550.2 Solanum lycopersicum HOM05D003764 ORTHO05D004356 4.5e-109 399.1 383 50.1
MSTRG.25298 Avicennia marina HOM05D003764 ORTHO05D004356 1.0e-108 397.9 445 47.0
PGSC0003DMG400029320 Solanum tuberosum HOM05D003764 ORTHO05D004356 1.7e-108 397.1 433 47.3
Migut.C00953 Erythranthe guttata HOM05D003764 ORTHO05D004356 2.3e-108 396.7 397 49.6
GSVIVG01008681001 Vitis vinifera HOM05D003764 ORTHO05D004356 6.6e-108 395.2 444 46.2
Oeu021826.1 Olea europaea HOM05D003764 ORTHO05D004356 8.6e-108 394.8 435 47.8
TAR628G1614 Trochodendron aralioides HOM05D003764 ORTHO05D004356 1.1e-107 394.4 372 50.3
SGA_v2.0_scaffold108G30849 Striga asiatica HOM05D003764 ORTHO05D004356 2.5e-107 393.3 397 49.4
SGA_v2.0_scaffold108G30854 Striga asiatica HOM05D003764 ORTHO05D004356 3.0e-105 386.3 379 50.1
Glyma.06G018900 Glycine max HOM05D003764 ORTHO05D004356 1.2e-104 384.4 429 45.7
Nitab4.5_0000699g0100 Nicotiana tabacum HOM05D003764 ORTHO05D004356 3.4e-104 382.9 425 46.1
Actinidia17035 Actinidia chinensis HOM05D003764 ORTHO05D004356 4.4e-104 382.5 436 46.6
Actinidia15487 Actinidia chinensis HOM05D003764 ORTHO05D004356 5.7e-104 382.1 421 47.0
AT1G76250 Arabidopsis thaliana HOM05D003764 ORTHO05D004356 7.5e-104 381.7 444 45.9
Sp5g31390 Schrenkiella parvula HOM05D003764 ORTHO05D004356 1.7e-103 380.6 383 48.8
Dinv31931 Davidia involucrata HOM05D003764 ORTHO05D004356 2.2e-103 380.2 452 44.0
Nitab4.5_0003544g0010 Nicotiana tabacum HOM05D003764 ORTHO05D004356 4.9e-103 379.0 428 46.3
Prupe.1G355100 Prunus persica HOM05D003764 ORTHO05D004356 4.9e-103 379.0 382 47.4
vmacro21825 Vaccinium macrocarpon HOM05D003764 ORTHO05D004356 6.3e-103 378.6 447 44.5
CARHR069810 Cardamine hirsuta HOM05D003764 ORTHO05D004356 8.3e-103 378.3 439 45.8
MD08G1003100 Malus domestica HOM05D003764 ORTHO05D004356 1.4e-102 377.5 366 50.0
Haze_22757 Corylus avellana HOM05D003764 ORTHO05D004356 1.8e-102 377.1 384 47.1
Phvul.009G021800 Phaseolus vulgaris HOM05D003764 ORTHO05D004356 1.8e-102 377.1 423 45.6
Lj4A804T73 Lonicera japonica HOM05D003764 ORTHO05D004356 3.2e-102 376.3 442 45.9
Nn6g31748 Nelumbo nucifera HOM05D003764 ORTHO05D004356 3.2e-102 376.3 446 44.4
Rhsim06G0008200 Rhododendron simsii HOM05D003764 ORTHO05D004356 3.2e-102 376.3 372 48.9
VMungo1309G0568 Vigna mungo HOM05D003764 ORTHO05D004356 5.4e-102 375.6 421 45.4
Thhalv10018564m.g Eutrema salsugineum HOM05D003764 ORTHO05D004356 7.0e-102 375.2 377 48.0
Peaxi162Scf00064g01131 Petunia axillaris HOM05D003764 ORTHO05D004356 7.0e-102 375.2 422 46.9
Carub.0002s2314 Capsella rubella HOM05D003764 ORTHO05D004356 1.2e-101 374.4 436 46.1
SGA_v2.0_scaffold275G46588 Striga asiatica HOM05D003764 ORTHO05D004356 1.2e-101 374.4 358 50.8
Aa31LG4G6340 Aethionema arabicum HOM05D003764 ORTHO05D004356 1.6e-101 374.0 380 48.2
BraA07t30497Z Brassica rapa HOM05D003764 ORTHO05D004356 1.6e-101 374.0 427 45.7
FAN27G3424 Fragaria x ananassa HOM05D003764 ORTHO05D004356 2.0e-101 373.6 372 49.5
arahy.Tifrunner.gnm1.ann1.I18LAP Arachis hypogaea HOM05D003764 ORTHO05D004356 2.7e-101 373.2 434 44.9
CANSAT80G1902 Cannabis sativa HOM05D003764 ORTHO05D004356 3.5e-101 372.9 395 47.1
CiPaw.07G139600 Carya illinoinensis HOM05D003764 ORTHO05D004356 7.8e-101 371.7 404 45.8
Glyma.04G018600 Glycine max HOM05D003764 ORTHO05D004356 7.8e-101 371.7 426 44.8
BcaC08g47274 Brassica carinata HOM05D003764 ORTHO05D004356 1.0e-100 371.3 370 49.2
A07p28580 Brassica napus HOM05D003764 ORTHO05D004356 1.0e-100 371.3 424 45.8
C06p50220 Brassica napus HOM05D003764 ORTHO05D004356 1.0e-100 371.3 370 49.2
BolC6t40061H Brassica oleracea HOM05D003764 ORTHO05D004356 1.0e-100 371.3 370 49.2
CANSAT25G3149 Cannabis sativa HOM05D003764 ORTHO05D004356 1.0e-100 371.3 414 44.7
FAN15G2102 Fragaria x ananassa HOM05D003764 ORTHO05D004356 1.0e-100 371.3 372 48.9
BcaC08g47123 Brassica carinata HOM05D003764 ORTHO05D004356 1.3e-100 370.9 370 49.2
arahy.Tifrunner.gnm1.ann1.CSAI9D Arachis hypogaea HOM05D003764 ORTHO05D004356 1.7e-100 370.5 434 44.7
A07p41820 Brassica napus HOM05D003764 ORTHO05D004356 1.7e-100 370.5 384 47.7
FvH4_2g37560 Fragaria vesca HOM05D003764 ORTHO05D004356 1.7e-100 370.5 372 48.9
BcaC08g45536 Brassica carinata HOM05D003764 ORTHO05D004356 2.3e-100 370.2 429 45.2
C06p32120 Brassica napus HOM05D003764 ORTHO05D004356 2.3e-100 370.2 429 45.2
BolC6t38338H Brassica oleracea HOM05D003764 ORTHO05D004356 2.3e-100 370.2 429 45.2
Nn5g30922 Nelumbo nucifera HOM05D003764 ORTHO05D004356 2.3e-100 370.2 372 47.3
BraA07t31712Z Brassica rapa HOM05D003764 ORTHO05D004356 3.9e-100 369.4 384 47.4
Eucgr.F01754 Eucalyptus grandis HOM05D003764 ORTHO05D004356 3.9e-100 369.4 370 48.4
Thecc.08G057700 Theobroma cacao HOM05D003764 ORTHO05D004356 3.9e-100 369.4 400 44.0
AUR62036887 Chenopodium quinoa HOM05D003764 ORTHO05D004356 5.0e-100 369.0 421 45.4
Manes.18G006000 Manihot esculenta HOM05D003764 ORTHO05D004356 5.0e-100 369.0 367 47.7
AUR62043557 Chenopodium quinoa HOM05D003764 ORTHO05D004356 8.6e-100 368.2 421 45.1
Lj1g0016047 Lotus japonicus HOM05D003764 ORTHO05D004356 8.6e-100 368.2 406 44.3
MBI08_g19981_MAGBIO Magnolia biondii HOM05D003764 ORTHO05D004356 1.5e-99 367.5 378 46.8
PGR031G0670 Punica granatum HOM05D003764 ORTHO05D004356 1.5e-99 367.5 408 45.3
Solyc04g082280.3 Solanum lycopersicum HOM05D003764 ORTHO05D004356 1.5e-99 367.5 371 48.0
TPR.G38113 Trifolium pratense HOM05D003764 ORTHO05D004356 1.9e-99 367.1 431 44.1
Medtr3g115180 Medicago truncatula HOM05D003764 ORTHO05D004356 2.5e-99 366.7 420 44.3
Sopen04g035900 Solanum pennellii HOM05D003764 ORTHO05D004356 4.3e-99 365.9 371 47.7
PGSC0003DMG400009974 Solanum tuberosum HOM05D003764 ORTHO05D004356 4.3e-99 365.9 371 47.4
Gohir.A01G106600 Gossypium hirsutum HOM05D003764 ORTHO05D004356 5.6e-99 365.5 418 44.5
RcHm_v2.0_Chr6g0304171 Rosa chinensis HOM05D003764 ORTHO05D004356 5.6e-99 365.5 372 48.4
Nitab4.5_0000588g0130 Nicotiana tabacum HOM05D003764 ORTHO05D004356 7.3e-99 365.2 375 47.2
Sc02g0009060 Simmondsia chinensis HOM05D003764 ORTHO05D004356 7.3e-99 365.2 415 45.3
Gorai.002G118500 Gossypium raimondii HOM05D003764 ORTHO05D004356 9.5e-99 364.8 434 43.5
Manes.05G135000 Manihot esculenta HOM05D003764 ORTHO05D004356 9.5e-99 364.8 438 44.3
Hund01762 Selenicereus undatus HOM05D003764 ORTHO05D004356 9.5e-99 364.8 434 43.8
TWI56G0154 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 9.5e-99 364.8 413 45.3
QL02p013934 Quercus lobata HOM05D003764 ORTHO05D004356 1.2e-98 364.4 378 45.5
BcaB02g07057 Brassica carinata HOM05D003764 ORTHO05D004356 2.1e-98 363.6 427 45.2
Duzib116G0421 Durio zibethinus HOM05D003764 ORTHO05D004356 2.8e-98 363.2 428 43.7
Cc10_g00740 Coffea canephora HOM05D003764 ORTHO05D004356 4.7e-98 362.5 426 46.5
ClCG11G018640 Citrullus lanatus HOM05D003764 ORTHO05D004356 8.0e-98 361.7 369 48.0
Gohir.D01G093100 Gossypium hirsutum HOM05D003764 ORTHO05D004356 1.4e-97 360.9 434 43.3
EL10Ac1g01980 Beta vulgaris HOM05D003764 ORTHO05D004356 3.1e-97 359.8 421 43.9
Gorai.009G188300 Gossypium raimondii HOM05D003764 ORTHO05D004356 3.1e-97 359.8 423 43.7
Aqoxy6G01751 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 4.0e-97 359.4 440 43.6
Sed0020753 Sechium edule HOM05D003764 ORTHO05D004356 6.8e-97 358.6 406 45.8
Ca_15440_v3 Cicer arietinum L. HOM05D003764 ORTHO05D004356 8.9e-97 358.2 431 42.9
Ciclev10001182m.g Citrus clementina HOM05D003764 ORTHO05D004356 8.9e-97 358.2 369 48.0
Lalb_Chr11g0061681 Lupinus albus HOM05D003764 ORTHO05D004356 8.9e-97 358.2 426 43.4
Gohir.A05G180000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 1.2e-96 357.8 423 43.5
Psat0s5633g0040 Pisum sativum HOM05D003764 ORTHO05D004356 1.2e-96 357.8 414 43.7
COL.COLO4_03998 Corchorus olitorius HOM05D003764 ORTHO05D004356 1.5e-96 357.5 370 46.5
Peaxi162Scf00104g00322 Petunia axillaris HOM05D003764 ORTHO05D004356 2.6e-96 356.7 425 44.2
Potri.002G011400 Populus trichocarpa HOM05D003764 ORTHO05D004356 5.8e-96 355.5 370 46.5
MELO3C017015.2 Cucumis melo HOM05D003764 ORTHO05D004356 7.5e-96 355.1 390 44.1
CsaV3_4G037170 Cucumis sativus L. HOM05D003764 ORTHO05D004356 7.5e-96 355.1 410 43.2
Ah.00g000380 Amaranthus hybridus HOM05D003764 ORTHO05D004356 3.7e-95 352.8 375 46.4
Gohir.D05G183000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 4.9e-95 352.4 423 43.5
Eucgr.F03548 Eucalyptus grandis HOM05D003764 ORTHO05D004356 6.4e-95 352.1 428 43.7
Sabra02G0008800 Salix brachista HOM05D003764 ORTHO05D004356 8.3e-95 351.7 385 46.0
PSO210G7283 Papaver somniferum HOM05D003764 ORTHO05D004356 1.4e-94 350.9 372 47.0
CSS0020809 Camellia sinensis var. sinensis HOM05D003764 ORTHO05D004356 1.9e-94 350.5 330 51.2
Potri.005G249600 Populus trichocarpa HOM05D003764 ORTHO05D004356 1.9e-94 350.5 370 46.2
Sabra05G0193100 Salix brachista HOM05D003764 ORTHO05D004356 1.9e-94 350.5 370 46.5
PSO170G5992 Papaver somniferum HOM05D003764 ORTHO05D004356 2.4e-94 350.1 373 46.9
Peaxi162Scf00064g01016 Petunia axillaris HOM05D003764 ORTHO05D004356 4.1e-94 349.4 370 49.7
CDE06G1096 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 5.4e-94 349.0 368 44.8
HanXRQChr15g0491851 Helianthus annuus HOM05D003764 ORTHO05D004356 2.0e-93 347.1 407 44.7
HanXRQChr14g0428241 Helianthus annuus HOM05D003764 ORTHO05D004356 2.7e-93 346.7 419 44.2
PSO017G4841 Papaver somniferum HOM05D003764 ORTHO05D004356 7.8e-93 345.1 366 47.5
SHI08003 Sapria himalayana HOM05D003764 ORTHO05D004356 1.0e-92 344.7 426 42.3
Duzib093G1245 Durio zibethinus HOM05D003764 ORTHO05D004356 8.6e-92 341.7 424 42.7
Lalb_Chr23g0265831 Lupinus albus HOM05D003764 ORTHO05D004356 9.5e-91 338.2 365 43.6
PSO017G3905 Papaver somniferum HOM05D003764 ORTHO05D004356 6.2e-90 335.5 385 44.4
Lsat_1_v5_gn_2_6240 Lactuca sativa HOM05D003764 ORTHO05D004356 5.2e-89 332.4 428 43.2
PSO170G4333 Papaver somniferum HOM05D003764 ORTHO05D004356 6.8e-89 332.0 449 40.1
ATR0106G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 3.4e-88 329.7 390 42.6
PSO170G1328 Papaver somniferum HOM05D003764 ORTHO05D004356 5.8e-88 328.9 365 45.2
PSO170G2421 Papaver somniferum HOM05D003764 ORTHO05D004356 1.7e-87 327.4 368 46.2
PSO104G0104 Papaver somniferum HOM05D003764 ORTHO05D004356 2.2e-87 327.0 365 44.9
PSO017G1302 Papaver somniferum HOM05D003764 ORTHO05D004356 6.4e-87 325.5 436 42.9
HPP92_022192 Vanilla planifolia HOM05D003764 ORTHO05D004356 8.3e-87 325.1 366 45.1
THA.LOC104813245 Tarenaya hassleriana HOM05D003764 ORTHO05D004356 2.4e-86 323.6 384 44.3
PSO170G6284 Papaver somniferum HOM05D003764 ORTHO05D004356 7.1e-86 322.0 430 41.6
PSO017G1063 Papaver somniferum HOM05D003764 ORTHO05D004356 2.1e-85 320.5 365 44.4
HPP92_022186 Vanilla planifolia HOM05D003764 ORTHO05D004356 2.1e-85 320.5 366 44.5
PSO017G1698 Papaver somniferum HOM05D003764 ORTHO05D004356 2.7e-85 320.1 423 41.6
HPP92_026195 Vanilla planifolia HOM05D003764 ORTHO05D004356 4.6e-85 319.3 371 42.6
PSO170G3515 Papaver somniferum HOM05D003764 ORTHO05D004356 6.0e-85 318.9 437 41.9
PSO017G3919 Papaver somniferum HOM05D003764 ORTHO05D004356 1.7e-84 317.4 385 44.4
Cfa014062 Carpinus fangiana HOM05D003764 ORTHO05D004356 6.8e-81 305.4 384 42.2
unitig_52.g17754 Utricularia gibba HOM05D003764 ORTHO05D004356 6.8e-81 305.4 240 60.4
Sabra02G0008700 Salix brachista HOM05D003764 ORTHO05D004356 2.9e-79 300.1 380 42.1
DCAR_013910 Daucus carota HOM05D003764 ORTHO05D004356 5.4e-78 295.8 385 42.1
SEGI_06086 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 2.1e-77 293.9 415 39.5
HPP92_026182 Vanilla planifolia HOM05D003764 ORTHO05D004356 2.7e-77 293.5 317 44.8
SEGI_23487 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 2.1e-74 283.9 421 38.5
SMO141G0079 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 3.1e-73 280.0 380 41.1
MD15G1002800 Malus domestica HOM05D003764 ORTHO05D004356 1.2e-72 278.1 249 51.4
Cpa.g.sc26.208 Carica papaya HOM05D003764 ORTHO05D004356 2.0e-72 277.3 315 43.2
CDE07G0072 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 1.1e-70 271.6 321 42.1
TWI12G0241 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 3.5e-69 266.5 252 48.8
Pp3c14_15070 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.7e-68 264.2 371 38.3
Mapoly0006s0188 Marchantia polymorpha HOM05D003764 ORTHO05D004356 3.9e-68 263.1 380 38.2
Mapoly0049s0068 Marchantia polymorpha HOM05D003764 ORTHO05D004356 5.1e-68 262.7 364 39.8
AagrBONN_evm.TU.Sc2ySwM_228.3221 Anthoceros agrestis HOM05D003764 ORTHO05D004356 2.8e-66 256.9 384 36.5
A09p51670 Brassica napus HOM05D003764 ORTHO05D004356 2.2e-63 247.3 240 48.8
SMO147G0236 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.4e-62 244.6 366 38.5
Pp3c1_32600 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.3e-60 238.0 372 37.6
SMO364G0266 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.7e-60 237.7 374 35.8
Atru.chr13.152 Acer truncatum HOM05D003764 ORTHO05D004356 8.7e-60 235.3 244 50.0
SMO367G1018 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 8.7e-60 235.3 369 36.0
Sabra02G0009000 Salix brachista HOM05D003764 ORTHO05D004356 4.3e-59 233.0 245 45.7
HanXRQChr14g0428221 Helianthus annuus HOM05D003764 ORTHO05D004356 1.6e-58 231.1 237 47.3
Zm00001eb209300 Zea mays HOM05D003764 ORTHO05D004356 6.2e-58 229.2 444 33.6
Pp3c2_5370 Physcomitrium patens HOM05D003764 ORTHO05D004356 9.0e-57 225.3 403 34.2
AagrBONN_evm.TU.Sc2ySwM_368.3397 Anthoceros agrestis HOM05D003764 ORTHO05D004356 6.4e-55 219.2 331 36.6
ECA238G1445 Erigeron canadensis HOM05D003764 ORTHO05D004356 1.9e-54 217.6 237 44.7
Pp3c17_7390 Physcomitrium patens HOM05D003764 ORTHO05D004356 3.2e-54 216.9 379 36.1
CBR_g3019 Chara braunii HOM05D003764 ORTHO05D004356 1.2e-53 214.9 406 33.3
Pp3c17_5840 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.4e-46 191.4 390 30.5
Aqoxy6G01618 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 4.3e-27 126.7 151 45.0
DCAR_010127 Daucus carota HOM05D003764 ORTHO05D004356 5.0e-23 113.2 180 36.1
ATR0756G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 4.1e-17 93.6 106 41.5
Os02g0119600 Oryza sativa ssp. japonica HOM05D003764 ORTHO05D004356 1.0e-12 79.0 79 39.2
SMO170G0013 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 5.2e-12 76.6 124 33.9
ATR0276G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 8.8e-12 75.9 93 38.7
ATR0138G019 Amborella trichopoda HOM05D003764 ORTHO05D004356 1.1e-09 68.9 80 41.2
Cfa013034 Carpinus fangiana HOM05D003764 ORTHO05D004356 3.1e-09 67.4 80 32.5
Potri.012G136700 Populus trichocarpa HOM05D003764 ORTHO05D004356 1.3e-07 62.0 79 46.8
ATR0555G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 2.5e-06 57.8 67 37.3


User provided reference genes

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