Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_747.g21874 Utricularia gibba HOM05D004019 ORTHO05D005136 1.5e-217 759.2 382 100.0
MSTRG.25887 Avicennia marina HOM05D004019 ORTHO05D005136 3.1e-114 416.0 346 63.9
Migut.A00257 Erythranthe guttata HOM05D004019 ORTHO05D005136 4.4e-108 395.6 346 60.7
Glyma.06G074700 Glycine max HOM05D004019 ORTHO05D005136 4.1e-98 362.5 347 55.3
SGA_v2.0_scaffold280G46835 Striga asiatica HOM05D004019 ORTHO05D005136 1.2e-97 360.9 346 56.9
Dinv14207 Davidia involucrata HOM05D004019 ORTHO05D005136 1.6e-97 360.5 347 55.3
Lalb_Chr11g0064021 Lupinus albus HOM05D004019 ORTHO05D005136 1.6e-97 360.5 348 56.9
Sopen08g021930 Solanum pennellii HOM05D004019 ORTHO05D005136 1.3e-96 357.5 346 54.0
Phvul.009G099400 Phaseolus vulgaris HOM05D004019 ORTHO05D005136 3.8e-96 355.9 344 56.4
CSS0034867 Camellia sinensis var. sinensis HOM05D004019 ORTHO05D005136 8.5e-96 354.8 347 55.0
Ca_15687_v3 Cicer arietinum L. HOM05D004019 ORTHO05D005136 8.5e-96 354.8 347 53.6
Dinv30236 Davidia involucrata HOM05D004019 ORTHO05D005136 1.5e-95 354.0 347 54.5
Cc08_g08140 Coffea canephora HOM05D004019 ORTHO05D005136 1.9e-95 353.6 346 54.6
TWI63G0705 Tripterygium wilfordii HOM05D004019 ORTHO05D005136 1.9e-95 353.6 347 55.3
Rhsim02G0185100 Rhododendron simsii HOM05D004019 ORTHO05D005136 2.5e-95 353.2 347 54.5
MD15G1113500 Malus domestica HOM05D004019 ORTHO05D005136 3.2e-95 352.8 345 54.8
PSO782G0289 Papaver somniferum HOM05D004019 ORTHO05D005136 3.2e-95 352.8 348 54.9
TAR624G1332 Trochodendron aralioides HOM05D004019 ORTHO05D005136 4.2e-95 352.4 347 55.0
arahy.Tifrunner.gnm1.ann1.P4KF2E Arachis hypogaea HOM05D004019 ORTHO05D005136 9.4e-95 351.3 349 53.0
Aqoxy7G01749 Aquilegia oxysepala HOM05D004019 ORTHO05D005136 2.7e-94 349.7 351 53.8
Lsat_1_v5_gn_3_27801 Lactuca sativa HOM05D004019 ORTHO05D005136 1.0e-93 347.8 346 54.3
Psat5g025600 Pisum sativum HOM05D004019 ORTHO05D005136 1.0e-93 347.8 347 52.4
Prupe.1G464500 Prunus persica HOM05D004019 ORTHO05D005136 1.8e-93 347.1 346 54.3
Manes.03G064200 Manihot esculenta HOM05D004019 ORTHO05D005136 2.3e-93 346.7 348 54.6
TPR.G12417 Trifolium pratense HOM05D004019 ORTHO05D005136 2.3e-93 346.7 347 53.3
arahy.Tifrunner.gnm1.ann1.WYF2AC Arachis hypogaea HOM05D004019 ORTHO05D005136 3.0e-93 346.3 349 52.7
Ciclev10007225m.g Citrus clementina HOM05D004019 ORTHO05D005136 4.0e-93 345.9 347 54.2
HanXRQChr17g0539391 Helianthus annuus HOM05D004019 ORTHO05D005136 1.5e-92 344.0 346 54.3
Lj1g0020850 Lotus japonicus HOM05D004019 ORTHO05D005136 2.6e-92 343.2 347 54.5
RcHm_v2.0_Chr6g0312581 Rosa chinensis HOM05D004019 ORTHO05D005136 1.3e-91 340.9 352 53.1
CANSAT25G1365 Cannabis sativa HOM05D004019 ORTHO05D005136 3.7e-91 339.3 347 51.9
ECA246G1280 Erigeron canadensis HOM05D004019 ORTHO05D005136 1.1e-90 337.8 350 52.6
Eucgr.C01572 Eucalyptus grandis HOM05D004019 ORTHO05D005136 1.8e-90 337.0 347 53.9
Medtr3g108360 Medicago truncatula HOM05D004019 ORTHO05D005136 1.8e-90 337.0 350 51.7
PSO063G5962 Papaver somniferum HOM05D004019 ORTHO05D005136 2.4e-90 336.7 347 53.3
FvH4_2g30330 Fragaria vesca HOM05D004019 ORTHO05D005136 3.1e-90 336.3 349 52.1
Nn8g39221 Nelumbo nucifera HOM05D004019 ORTHO05D005136 4.1e-90 335.9 349 53.6
PGR031G1071 Punica granatum HOM05D004019 ORTHO05D005136 4.1e-90 335.9 349 52.1
CANSAT56G4370 Cannabis sativa HOM05D004019 ORTHO05D005136 5.4e-90 335.5 347 51.3
FAN20G0521 Fragaria x ananassa HOM05D004019 ORTHO05D005136 1.6e-89 334.0 349 52.4
Potri.006G244900 Populus trichocarpa HOM05D004019 ORTHO05D005136 1.6e-89 334.0 348 53.7
Atru.chr7.2305 Acer truncatum HOM05D004019 ORTHO05D005136 4.5e-89 332.4 347 53.6
Hma1.2p1_0140F.1_g063760 Hydrangea macrophylla HOM05D004019 ORTHO05D005136 2.9e-88 329.7 322 55.6
MBI03_g19627_MAGBIO Magnolia biondii HOM05D004019 ORTHO05D005136 6.6e-88 328.6 356 52.8
GSVIVG01035749001 Vitis vinifera HOM05D004019 ORTHO05D005136 2.5e-87 326.6 321 53.6
Sabra06G0191800 Salix brachista HOM05D004019 ORTHO05D005136 1.2e-86 324.3 348 52.6
Gorai.009G053000 Gossypium raimondii HOM05D004019 ORTHO05D005136 2.1e-86 323.6 346 51.4
Thhalv10000005m.g Eutrema salsugineum HOM05D004019 ORTHO05D005136 8.0e-86 321.6 346 50.6
Sc09g0008920 Simmondsia chinensis HOM05D004019 ORTHO05D005136 8.0e-86 321.6 350 50.3
Gohir.A05G049400 Gossypium hirsutum HOM05D004019 ORTHO05D005136 1.4e-85 320.9 346 50.3
AUR62032391 Chenopodium quinoa HOM05D004019 ORTHO05D005136 1.8e-85 320.5 347 49.3
CiPaw.07G216600 Carya illinoinensis HOM05D004019 ORTHO05D005136 2.3e-85 320.1 347 51.0
FAN24G2881 Fragaria x ananassa HOM05D004019 ORTHO05D005136 2.3e-85 320.1 365 50.1
AUR62024824 Chenopodium quinoa HOM05D004019 ORTHO05D005136 6.8e-85 318.5 347 49.0
COL.COLO4_18737 Corchorus olitorius HOM05D004019 ORTHO05D005136 1.5e-84 317.4 347 50.7
Sp4g05330 Schrenkiella parvula HOM05D004019 ORTHO05D005136 1.5e-84 317.4 346 50.0
ATR1120G055 Amborella trichopoda HOM05D004019 ORTHO05D005136 2.0e-84 317.0 344 50.6
AT2G25730 Arabidopsis thaliana HOM05D004019 ORTHO05D005136 5.7e-84 315.5 346 50.3
vmacro11102 Vaccinium macrocarpon HOM05D004019 ORTHO05D005136 5.7e-84 315.5 416 45.0
EL10Ac2g02527 Beta vulgaris HOM05D004019 ORTHO05D005136 7.5e-84 315.1 347 48.7
CARHR115530 Cardamine hirsuta HOM05D004019 ORTHO05D005136 7.5e-84 315.1 345 50.1
Actinidia13300 Actinidia chinensis HOM05D004019 ORTHO05D005136 1.3e-83 314.3 347 51.3
Sed0026885 Sechium edule HOM05D004019 ORTHO05D005136 1.3e-83 314.3 346 48.8
CsaV3_3G046830 Cucumis sativus L. HOM05D004019 ORTHO05D005136 4.9e-83 312.4 346 48.8
THA.LOC104803772 Tarenaya hassleriana HOM05D004019 ORTHO05D005136 6.4e-83 312.0 344 50.3
Thecc.09G037700 Theobroma cacao HOM05D004019 ORTHO05D005136 4.6e-81 305.8 346 50.3
Aa31LG5G9950 Aethionema arabicum HOM05D004019 ORTHO05D005136 5.9e-81 305.4 346 50.0
Carub.0004s0550 Capsella rubella HOM05D004019 ORTHO05D005136 7.8e-81 305.1 346 49.1
AL4G17350 Arabidopsis lyrata HOM05D004019 ORTHO05D005136 1.3e-80 304.3 346 48.8
Ah.12g060350 Amaranthus hybridus HOM05D004019 ORTHO05D005136 2.3e-80 303.5 351 49.0
DCAR_006255 Daucus carota HOM05D004019 ORTHO05D005136 6.6e-80 302.0 327 52.9
HPP92_006442 Vanilla planifolia HOM05D004019 ORTHO05D005136 5.2e-77 292.4 347 47.3
A03p27040 Brassica napus HOM05D004019 ORTHO05D005136 9.8e-76 288.1 345 47.5
BraA03t11915Z Brassica rapa HOM05D004019 ORTHO05D005136 9.8e-76 288.1 345 47.5
C03p32450 Brassica napus HOM05D004019 ORTHO05D005136 1.3e-75 287.7 345 47.2
BolC3t15586H Brassica oleracea HOM05D004019 ORTHO05D005136 1.3e-75 287.7 345 47.2
Cpa.g.sc205.19 Carica papaya HOM05D004019 ORTHO05D005136 7.0e-74 282.0 330 50.0
Zm00001eb161040 Zea mays HOM05D004019 ORTHO05D005136 1.0e-72 278.1 346 45.1
CDE10G0881 Ceratophyllum demersum HOM05D004019 ORTHO05D005136 4.3e-71 272.7 349 48.1
SHI11647 Sapria himalayana HOM05D004019 ORTHO05D005136 6.4e-67 258.8 315 47.3
Haze_21656 Corylus avellana HOM05D004019 ORTHO05D005136 2.5e-63 246.9 429 39.6
SEGI_01785 Sequoiadendron giganteum HOM05D004019 ORTHO05D005136 2.7e-57 226.9 337 43.3
Solyc08g068040.3 Solanum lycopersicum HOM05D004019 ORTHO05D005136 4.6e-57 226.1 188 61.2
Peaxi162Scf00105g00812 Petunia axillaris HOM05D004019 ORTHO05D005136 6.0e-57 225.7 187 60.4
SalBow4G2655 Salvia bowleyana HOM05D004019 ORTHO05D005136 5.1e-56 222.6 188 63.8
Nitab4.5_0000250g0110 Nicotiana tabacum HOM05D004019 ORTHO05D005136 1.9e-55 220.7 366 39.3
QL12p030952 Quercus lobata HOM05D004019 ORTHO05D005136 4.0e-53 213.0 191 57.6
MELO3C003655.2 Cucumis melo HOM05D004019 ORTHO05D005136 1.7e-51 207.6 250 46.0
ClCG05G017320 Citrullus lanatus HOM05D004019 ORTHO05D005136 5.4e-50 202.6 188 55.9
Mapoly0049s0060 Marchantia polymorpha HOM05D004019 ORTHO05D005136 3.9e-48 196.4 365 33.7
Pp3c19_2530 Physcomitrium patens HOM05D004019 ORTHO05D005136 1.6e-41 174.5 365 33.2
CBR_g31401 Chara braunii HOM05D004019 ORTHO05D005136 9.6e-31 138.7 391 31.2
SMO172G0089 Selaginella moellendorffii HOM05D004019 ORTHO05D005136 6.2e-30 136.0 328 31.4
Lj8C607G10 Lonicera japonica HOM05D004019 ORTHO05D005136 4.0e-29 133.3 156 48.7
QL12p030977 Quercus lobata HOM05D004019 ORTHO05D005136 5.3e-29 132.9 159 47.8
Solyc08g068030.1 Solanum lycopersicum HOM05D004019 ORTHO05D005136 4.3e-23 113.2 143 44.1
AagrBONN_evm.TU.Sc2ySwM_340.130 Anthoceros agrestis HOM05D004019 ORTHO05D005136 2.8e-22 110.5 344 27.6
Nitab4.5_0002393g0030 Nicotiana tabacum HOM05D004019 ORTHO05D005136 5.0e-19 99.8 121 47.9
Prupe.5G099400 Prunus persica HOM05D004019 ORTHO05D005136 6.1e-17 92.8 72 61.1


User provided reference genes

Program Settings