Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_747.g21862 Utricularia gibba HOM05D002383 ORTHO05D002515 4.6e-48 194.1 91 100.0
unitig_0.g2800 Utricularia gibba HOM05D002383 ORTHO05D002515 9.7e-22 106.7 68 76.5
unitig_37.g12424 Utricularia gibba HOM05D000060 ORTHO05D000082 1.2e-11 73.2 58 69.0
unitig_32.g10671 Utricularia gibba HOM05D002383 ORTHO05D002515 1.4e-09 66.2 80 50.0
PSO478G3770 Papaver somniferum HOM05D002383 ORTHO05D002515 2.7e-08 62.0 60 43.3
CDE07G1210 Ceratophyllum demersum HOM05D002383 ORTHO05D002515 7.9e-08 60.5 73 49.3
Ah.02g130200 Amaranthus hybridus HOM05D002383 ORTHO05D002515 1.8e-07 59.3 65 44.6
RcHm_v2.0_Chr4g0432781 Rosa chinensis HOM05D002383 ORTHO05D002515 2.3e-07 58.9 64 53.1
BraA09t37356Z Brassica rapa HOM05D002383 ORTHO05D002515 3.0e-07 58.5 82 39.0
TWI56G1026 Tripterygium wilfordii HOM05D002383 ORTHO05D002515 3.0e-07 58.5 71 43.7
AL7G49370 Arabidopsis lyrata HOM05D002383 ORTHO05D002515 3.9e-07 58.2 51 54.9
BolC9t55044H Brassica oleracea HOM05D002383 ORTHO05D002515 3.9e-07 58.2 82 36.6
BcaB06g27511 Brassica carinata HOM05D002383 ORTHO05D002515 5.1e-07 57.8 64 50.0
CSS0011711 Camellia sinensis var. sinensis HOM05D002383 ORTHO05D002515 5.1e-07 57.8 54 59.3
Lsat_1_v5_gn_4_183900 Lactuca sativa HOM05D002383 ORTHO05D002515 6.7e-07 57.4 60 50.0
Oeu054622.1 Olea europaea HOM05D002383 ORTHO05D002515 6.7e-07 57.4 69 53.6
HanXRQChr14g0450551 Helianthus annuus HOM05D002383 ORTHO05D002515 8.8e-07 57.0 70 44.3
Lsat_1_v5_gn_0_39801 Lactuca sativa HOM05D002383 ORTHO05D002515 8.8e-07 57.0 48 58.3
Aa31LG2G5040 Aethionema arabicum HOM05D002383 ORTHO05D002515 1.1e-06 56.6 69 49.3
Aqoxy5G03793 Aquilegia oxysepala HOM05D002383 ORTHO05D002515 1.1e-06 56.6 51 56.9
A04p13490 Brassica napus HOM05D002383 ORTHO05D002515 1.1e-06 56.6 64 50.0
A09p17240 Brassica napus HOM05D002383 ORTHO05D002515 1.1e-06 56.6 82 37.8
C04p47260 Brassica napus HOM05D002383 ORTHO05D002515 1.1e-06 56.6 64 50.0
BolC4t26325H Brassica oleracea HOM05D002383 ORTHO05D002515 1.1e-06 56.6 64 50.0
BraA04t17007Z Brassica rapa HOM05D002383 ORTHO05D002515 1.1e-06 56.6 64 50.0
Oeu018138.1 Olea europaea HOM05D002383 ORTHO05D002515 1.1e-06 56.6 68 52.9
Aqoxy2G01151 Aquilegia oxysepala HOM05D002383 ORTHO05D002515 1.5e-06 56.2 65 49.2
SalBow2G2844 Salvia bowleyana HOM05D002383 ORTHO05D002515 1.5e-06 56.2 73 43.8
Aa31LG2G9800 Aethionema arabicum HOM05D002383 ORTHO05D002515 2.0e-06 55.8 62 48.4
Thhalv10028250m.g Eutrema salsugineum HOM05D002383 ORTHO05D002515 2.0e-06 55.8 53 54.7
TAR371G1055 Trochodendron aralioides HOM05D002383 ORTHO05D002515 2.0e-06 55.8 63 47.6
C09p21300 Brassica napus HOM05D002383 ORTHO05D002515 2.6e-06 55.5 82 36.6
CARHR261560 Cardamine hirsuta HOM05D002383 ORTHO05D002515 2.6e-06 55.5 53 54.7
ClCG09G019250 Citrullus lanatus HOM05D002383 ORTHO05D002515 2.6e-06 55.5 66 45.5
CsaV3_5G027140 Cucumis sativus L. HOM05D002383 ORTHO05D002515 2.6e-06 55.5 66 45.5
Sabra10G0023100 Salix brachista HOM05D001342 ORTHO05D001286 2.6e-06 55.5 51 52.9
Actinidia05994 Actinidia chinensis HOM05D002383 ORTHO05D002515 3.3e-06 55.1 58 51.7
BcaC04g22271 Brassica carinata HOM05D002383 ORTHO05D002515 3.3e-06 55.1 82 36.6
Cfa007370 Carpinus fangiana HOM05D002383 ORTHO05D002515 3.3e-06 55.1 82 45.1
PGR142G2811 Punica granatum HOM05D002383 ORTHO05D002515 3.3e-06 55.1 71 49.3
Solyc02g086450.1 Solanum lycopersicum HOM05D002383 ORTHO05D002515 3.3e-06 55.1 52 57.7
PGSC0003DMG400012600 Solanum tuberosum HOM05D002383 ORTHO05D002515 3.3e-06 55.1 63 47.6
TAR629G2295 Trochodendron aralioides HOM05D002383 ORTHO05D002515 3.3e-06 55.1 79 43.0
Aa31LG9G1160 Aethionema arabicum HOM05D002383 ORTHO05D002515 4.4e-06 54.7 58 48.3
BolC9t53287H Brassica oleracea HOM05D002383 ORTHO05D002515 4.4e-06 54.7 74 41.9
Hma1.2p1_0223F.1_g094100 Hydrangea macrophylla HOM05D002383 ORTHO05D002515 4.4e-06 54.7 65 47.7
Potri.010G045200 Populus trichocarpa HOM05D002383 ORTHO05D002515 4.4e-06 54.7 54 50.0
MSTRG.570 Avicennia marina HOM05D002383 ORTHO05D002515 5.7e-06 54.3 77 40.3
Cpa.g.sc33.8 Carica papaya HOM05D002383 ORTHO05D002515 5.7e-06 54.3 68 48.5
Manes.15G150600 Manihot esculenta HOM05D002383 ORTHO05D002515 5.7e-06 54.3 49 57.1
SalBow1G3310 Salvia bowleyana HOM05D002383 ORTHO05D002515 5.7e-06 54.3 58 53.4
MSTRG.3147 Avicennia marina HOM05D002383 ORTHO05D002515 7.4e-06 53.9 49 59.2
MELO3C021579.2 Cucumis melo HOM05D002383 ORTHO05D002515 7.4e-06 53.9 66 43.9
Migut.K01394 Erythranthe guttata HOM05D002383 ORTHO05D002515 7.4e-06 53.9 55 56.4
Phvul.004G010700 Phaseolus vulgaris HOM05D002383 ORTHO05D002515 7.4e-06 53.9 57 52.6
Potri.008G187300 Populus trichocarpa HOM05D002383 ORTHO05D002515 7.4e-06 53.9 51 51.0
Potri.017G070000 Populus trichocarpa HOM05D002383 ORTHO05D002515 7.4e-06 53.9 79 43.0
BcaNung05346 Brassica carinata HOM05D002383 ORTHO05D002515 9.7e-06 53.5 74 39.2
BcaNung05347 Brassica carinata HOM05D002383 ORTHO05D002515 9.7e-06 53.5 82 35.4
Carub.0007s3513 Capsella rubella HOM05D002383 ORTHO05D002515 9.7e-06 53.5 52 53.8
Ciclev10017241m.g Citrus clementina HOM05D002383 ORTHO05D002515 9.7e-06 53.5 48 56.2
FvH4_4g25460 Fragaria vesca HOM05D002383 ORTHO05D002515 9.7e-06 53.5 51 54.9
FAN07G2594 Fragaria x ananassa HOM05D002383 ORTHO05D002515 9.7e-06 53.5 51 54.9
FAN12G0172 Fragaria x ananassa HOM05D002383 ORTHO05D002515 9.7e-06 53.5 51 54.9
FAN17G0502 Fragaria x ananassa HOM05D002383 ORTHO05D002515 9.7e-06 53.5 51 54.9
PSO017G4221 Papaver somniferum HOM05D002383 ORTHO05D002515 9.7e-06 53.5 51 43.1
Sopen02g031160 Solanum pennellii HOM05D002383 ORTHO05D002515 9.7e-06 53.5 63 50.8
THA.LOC104805371 Tarenaya hassleriana HOM05D002383 ORTHO05D002515 9.7e-06 53.5 53 54.7


User provided reference genes

Program Settings