Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_747.g21851 Utricularia gibba HOM05D000974 ORTHO05D007456 8.0e-141 503.8 267 100.0
RcHm_v2.0_Chr1g0380171 Rosa chinensis HOM05D000974 ORTHO05D007456 1.1e-89 334.0 265 66.0
FAN03G2436 Fragaria x ananassa HOM05D000974 ORTHO05D006000 3.2e-89 332.4 265 66.0
FAN10G1776 Fragaria x ananassa HOM05D000974 ORTHO05D007456 3.2e-89 332.4 265 66.0
Migut.F00239 Erythranthe guttata HOM05D000974 ORTHO05D007456 2.7e-88 329.3 259 64.9
FAN10G1818 Fragaria x ananassa HOM05D000974 ORTHO05D006000 2.7e-88 329.3 265 65.7
FAN06G4709 Fragaria x ananassa HOM05D000974 ORTHO05D007456 3.5e-88 328.9 265 65.3
Oeu060978.1 Olea europaea HOM05D000974 ORTHO05D007456 7.8e-88 327.8 265 63.4
FvH4_7g31090 Fragaria vesca HOM05D000974 ORTHO05D007456 1.7e-87 326.6 265 64.9
FAN06G0673 Fragaria x ananassa HOM05D000974 ORTHO05D007456 1.7e-87 326.6 265 64.9
Dinv28331 Davidia involucrata HOM05D000974 ORTHO05D007456 2.3e-87 326.2 256 65.6
Potri.015G021400 Populus trichocarpa HOM05D000974 ORTHO05D007456 3.9e-87 325.5 265 64.5
Cc02_g01830 Coffea canephora HOM05D000974 ORTHO05D007456 8.6e-87 324.3 265 63.8
Ciclev10005489m.g Citrus clementina HOM05D000974 ORTHO05D007456 1.5e-86 323.6 265 63.0
Potri.015G021100 Populus trichocarpa HOM05D000974 ORTHO05D007456 1.9e-86 323.2 265 63.8
Actinidia34202 Actinidia chinensis HOM05D000974 ORTHO05D007456 7.3e-86 321.2 265 63.4
Manes.06G157800 Manihot esculenta HOM05D000974 ORTHO05D007456 7.3e-86 321.2 266 63.5
MD01G1215900 Malus domestica HOM05D000974 ORTHO05D007456 6.8e-84 314.7 265 63.0
Thecc.03G193600 Theobroma cacao HOM05D000974 ORTHO05D007456 1.2e-83 313.9 265 61.1
Potri.012G031000 Populus trichocarpa HOM05D000974 ORTHO05D007456 3.4e-83 312.4 265 61.1
Prupe.2G308000 Prunus persica HOM05D000974 ORTHO05D002201 1.7e-82 310.1 265 62.6
AUR62006147 Chenopodium quinoa HOM05D000974 ORTHO05D007456 2.9e-82 309.3 266 60.5
MD07G1285800 Malus domestica HOM05D000974 ORTHO05D007456 2.9e-82 309.3 265 62.6
TWI39G1278 Tripterygium wilfordii HOM05D000974 ORTHO05D007456 4.9e-82 308.5 265 61.1
COL.COLO4_35640 Corchorus olitorius HOM05D000974 ORTHO05D007456 1.9e-81 306.6 265 59.6
SGA_v2.0_scaffold192G40573 Striga asiatica HOM05D000974 ORTHO05D007456 3.2e-81 305.8 266 62.8
Ca_16682_v3 Cicer arietinum L. HOM05D000974 ORTHO05D007456 3.5e-80 302.4 265 57.7
PGR142G2075 Punica granatum HOM05D000974 ORTHO05D007456 3.5e-80 302.4 265 60.8
Nitab4.5_0002589g0050 Nicotiana tabacum HOM05D000974 ORTHO05D007456 4.6e-80 302.0 265 60.4
DCAR_020306 Daucus carota HOM05D000974 ORTHO05D007456 7.8e-80 301.2 266 60.9
EL10Ac3g05342 Beta vulgaris HOM05D000974 ORTHO05D007456 1.0e-79 300.8 276 59.1
Nitab4.5_0005625g0010 Nicotiana tabacum HOM05D000974 ORTHO05D007456 1.0e-79 300.8 265 61.1
SalBow4G2102 Salvia bowleyana HOM05D000974 ORTHO05D007456 2.3e-79 299.7 266 59.8
vmacro06564 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 2.3e-79 299.7 300 54.7
CANSAT21G0519 Cannabis sativa HOM05D000974 ORTHO05D007456 6.6e-79 298.1 267 58.4
Gohir.D09G178500 Gossypium hirsutum HOM05D000974 ORTHO05D007456 1.1e-78 297.4 265 58.1
TPR.G17305 Trifolium pratense HOM05D000974 ORTHO05D007456 1.5e-78 297.0 265 57.4
CSS0027071 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D007456 1.9e-78 296.6 265 58.9
Rhsim09G0204100 Rhododendron simsii HOM05D000974 ORTHO05D007456 1.9e-78 296.6 265 58.9
ClCG01G000560 Citrullus lanatus HOM05D000974 ORTHO05D007456 3.3e-78 295.8 266 60.2
Gohir.A09G183700 Gossypium hirsutum HOM05D000974 ORTHO05D007456 3.3e-78 295.8 266 57.1
Gorai.006G200500 Gossypium raimondii HOM05D000974 ORTHO05D007456 4.3e-78 295.4 265 57.7
Peaxi162Scf00904g00123 Petunia axillaris HOM05D000974 ORTHO05D007456 1.3e-77 293.9 265 59.6
Sabra12G0020600 Salix brachista HOM05D000974 ORTHO05D007456 2.1e-77 293.1 278 56.1
CsaV3_5G000660 Cucumis sativus L. HOM05D000974 ORTHO05D007456 4.8e-77 292.0 266 59.4
Sed0023834 Sechium edule HOM05D000974 ORTHO05D007456 8.1e-77 291.2 266 59.8
Haze_00118 Corylus avellana HOM05D000974 ORTHO05D007456 1.1e-76 290.8 265 58.1
Glyma.04G238050 Glycine max HOM05D000974 ORTHO05D007456 1.4e-76 290.4 265 57.0
GSVIVG01028702001 Vitis vinifera HOM05D000974 ORTHO05D007456 1.8e-76 290.0 265 57.0
Medtr3g090955 Medicago truncatula HOM05D000974 ORTHO05D007456 6.9e-76 288.1 265 57.0
AUR62019342 Chenopodium quinoa HOM05D000974 ORTHO05D007456 4.4e-75 285.4 266 56.8
vmacro10108 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 5.8e-75 285.0 265 57.7
VMungo1309G2916 Vigna mungo HOM05D000974 ORTHO05D007456 1.3e-74 283.9 265 54.0
Glyma.06G125900 Glycine max HOM05D000974 ORTHO05D007456 4.9e-74 282.0 265 55.1
Rhsim03G0199900 Rhododendron simsii HOM05D000974 ORTHO05D007456 2.4e-73 279.6 265 57.4
Thhalv10005277m.g Eutrema salsugineum HOM05D000974 ORTHO05D007456 1.2e-72 277.3 267 54.7
Phvul.009G137800 Phaseolus vulgaris HOM05D000974 ORTHO05D007456 1.6e-72 276.9 265 53.2
arahy.Tifrunner.gnm1.ann1.D5FDUQ Arachis hypogaea HOM05D000974 ORTHO05D007456 6.0e-72 275.0 266 54.1
arahy.Tifrunner.gnm1.ann1.LG8YER Arachis hypogaea HOM05D000974 ORTHO05D007456 6.0e-72 275.0 266 54.1
C07p43580 Brassica napus HOM05D000974 ORTHO05D007456 1.0e-71 274.2 267 54.7
BolC7t44885H Brassica oleracea HOM05D000974 ORTHO05D007456 1.0e-71 274.2 267 54.7
Lalb_Chr11g0066601 Lupinus albus HOM05D000974 ORTHO05D007456 1.0e-71 274.2 266 54.1
AL6G35490 Arabidopsis lyrata HOM05D000974 ORTHO05D007456 1.3e-71 273.9 267 54.3
A06p34970 Brassica napus HOM05D000974 ORTHO05D007456 1.3e-71 273.9 267 54.7
BraA06t26421Z Brassica rapa HOM05D000974 ORTHO05D007456 1.3e-71 273.9 267 54.7
BcaNung01212 Brassica carinata HOM05D000974 ORTHO05D007456 1.7e-71 273.5 267 55.1
CARHR189450 Cardamine hirsuta HOM05D000974 ORTHO05D007456 1.7e-71 273.5 267 54.3
PSO135G0499 Papaver somniferum HOM05D000974 ORTHO05D007456 1.7e-71 273.5 268 55.2
AT5G24130 Arabidopsis thaliana HOM05D000974 ORTHO05D007456 3.9e-71 272.3 267 54.3
Cpa.g.sc34.147 Carica papaya HOM05D000974 ORTHO05D007456 3.9e-71 272.3 265 56.2
BcaNung01815 Brassica carinata HOM05D000974 ORTHO05D007456 6.6e-71 271.6 267 53.9
PSO384G1506 Papaver somniferum HOM05D000974 ORTHO05D007456 6.6e-71 271.6 268 54.5
Aa31LG11G3400 Aethionema arabicum HOM05D000974 ORTHO05D007456 1.5e-70 270.4 267 53.2
THA.LOC104821367 Tarenaya hassleriana HOM05D000974 ORTHO05D007456 2.5e-70 269.6 266 54.1
Lsat_1_v5_gn_9_57980 Lactuca sativa HOM05D000974 ORTHO05D007456 2.1e-69 266.5 268 54.5
HanXRQChr14g0462881 Helianthus annuus HOM05D000974 ORTHO05D007456 6.2e-69 265.0 259 52.5
Sp2g23180 Schrenkiella parvula HOM05D000974 ORTHO05D007456 6.2e-69 265.0 268 54.1
ECA232G4254 Erigeron canadensis HOM05D000974 ORTHO05D007456 3.1e-68 262.7 267 53.6
TAR636G3288 Trochodendron aralioides HOM05D000974 ORTHO05D007456 3.1e-68 262.7 265 55.8
Lsat_1_v5_gn_2_134181 Lactuca sativa HOM05D000974 ORTHO05D007456 9.0e-68 261.2 265 51.3
HanXRQChr09g0253031 Helianthus annuus HOM05D000974 ORTHO05D007456 9.9e-67 257.7 254 53.1
Oeu060979.1 Olea europaea HOM05D000974 ORTHO05D007456 9.9e-67 257.7 203 63.1
Carub.0006s2186 Capsella rubella HOM05D000974 ORTHO05D007456 4.9e-66 255.4 266 52.3
Rhsim09G0204200 Rhododendron simsii HOM05D000974 ORTHO05D007456 4.9e-66 255.4 264 54.5
Lj1g0000480 Lotus japonicus HOM05D000974 ORTHO05D007456 6.4e-66 255.0 265 50.9
Potri.015G021300 Populus trichocarpa HOM05D000974 ORTHO05D007456 6.0e-64 248.4 206 62.1
Psat5g079560 Pisum sativum HOM05D000974 ORTHO05D007456 7.9e-64 248.1 265 50.9
Atru.chr1.258 Acer truncatum HOM05D000974 ORTHO05D007456 3.9e-63 245.7 265 53.6
Aqoxy7G00132 Aquilegia oxysepala HOM05D000974 ORTHO05D007456 1.1e-62 244.2 266 51.9
Lj1A1013G39 Lonicera japonica HOM05D000974 ORTHO05D007456 4.3e-62 242.3 265 52.5
SalBow4G1511 Salvia bowleyana HOM05D000974 ORTHO05D007456 2.8e-61 239.6 266 52.3
Cfa016368 Carpinus fangiana HOM05D000974 ORTHO05D007456 1.1e-60 237.7 266 52.3
Lj3A909T48 Lonicera japonica HOM05D000974 ORTHO05D007456 1.5e-59 233.8 259 53.7
Duzib084G1361 Durio zibethinus HOM05D000974 ORTHO05D007456 5.8e-59 231.9 265 51.7
TAR375G0325 Trochodendron aralioides HOM05D000974 ORTHO05D007456 1.3e-58 230.7 267 51.3
DCAR_014533 Daucus carota HOM05D000974 ORTHO05D007456 3.8e-58 229.2 266 52.6
HPP92_005207 Vanilla planifolia HOM05D000974 ORTHO05D007456 5.7e-54 215.3 268 48.1
MBI07_g34227_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 2.1e-53 213.4 266 48.5
Zm00001eb238160 Zea mays HOM05D000974 ORTHO05D007456 6.3e-53 211.8 276 48.2
ECA238G2040 Erigeron canadensis HOM05D005084 ORTHO05D006254 5.0e-50 202.2 214 51.4
QL09p010742 Quercus lobata HOM05D000974 ORTHO05D007456 1.6e-48 197.2 244 47.1
Nn1g01835 Nelumbo nucifera HOM05D000974 ORTHO05D007456 1.8e-44 183.7 266 43.6
AagrBONN_evm.TU.Sc2ySwM_117.3541 Anthoceros agrestis HOM05D000974 ORTHO05D007456 1.5e-43 180.6 269 40.9
CDE10G0850 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 1.0e-39 167.9 267 41.2
SMO347G0394 Selaginella moellendorffii HOM05D000974 ORTHO05D007456 3.0e-39 166.4 272 41.5
Zm00001eb345000 Zea mays HOM05D000974 ORTHO05D007456 1.1e-38 164.5 265 43.8
Os05g0586700 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 7.4e-38 161.8 298 39.9
Os02g0257200 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 2.8e-37 159.8 273 42.9
CiPaw.05G257400 Carya illinoinensis HOM05D000974 ORTHO05D007456 6.3e-37 158.7 131 62.6
Mapoly0123s0011 Marchantia polymorpha HOM05D000974 ORTHO05D007456 4.1e-36 156.0 264 39.0
PGSC0003DMG400009074 Solanum tuberosum HOM05D000974 ORTHO05D007456 2.2e-34 150.2 137 57.7
Sopen03g003300 Solanum pennellii HOM05D000974 ORTHO05D007456 6.5e-34 148.7 137 56.9
Oeu060977.1 Olea europaea HOM05D000974 ORTHO05D007456 1.0e-31 141.4 119 62.2
Pp3c2_19140 Physcomitrium patens HOM05D000974 ORTHO05D007456 1.5e-30 137.5 268 37.3
CiPaw.05G257300 Carya illinoinensis HOM05D000974 ORTHO05D007456 1.6e-27 127.5 101 64.4
MBI07_g45742_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 5.9e-27 125.6 123 56.9
Lalb_Chr08g0240561 Lupinus albus HOM05D000974 ORTHO05D007456 8.5e-26 121.7 124 53.2
Hma1.2p1_1655F.1_g295980 Hydrangea macrophylla HOM05D000974 ORTHO05D007456 1.1e-25 121.3 150 48.7
Actinidia08630 Actinidia chinensis HOM05D000974 ORTHO05D007456 5.5e-25 119.0 112 60.7
Pp3c3_31670 Physcomitrium patens HOM05D000974 ORTHO05D007456 5.2e-23 112.5 158 46.2
Rhsim02G0197500 Rhododendron simsii HOM05D000974 ORTHO05D007456 4.4e-22 109.4 176 38.1
Rhsim04G0082700 Rhododendron simsii HOM05D000974 ORTHO05D007456 2.2e-21 107.1 176 37.5
ATR0589G055 Amborella trichopoda HOM05D000974 ORTHO05D007456 1.4e-20 104.4 120 51.7
FAN01G0307 Fragaria x ananassa HOM05D000974 ORTHO05D007456 5.3e-20 102.4 265 32.1
Lalb_Chr08g0240551 Lupinus albus HOM05D000974 ORTHO05D007456 2.2e-18 97.1 96 46.9
vmacro10109 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 3.2e-17 93.2 153 40.5
TAR629G1462 Trochodendron aralioides HOM05D000974 ORTHO05D007456 1.7e-13 80.9 103 41.7
Atru.chr1.262 Acer truncatum HOM05D000974 ORTHO05D007456 9.1e-12 75.1 62 67.7
Lalb_Chr08g0240541 Lupinus albus HOM05D000974 ORTHO05D007456 4.5e-11 72.8 62 58.1
CDE10G0750 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 6.5e-10 68.9 90 45.6


User provided reference genes

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