Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_747.g21812 Utricularia gibba HOM05D006972 ORTHO05D008519 2.6e-115 418.7 207 100.0
MSTRG.3630 Avicennia marina HOM05D006972 ORTHO05D008519 4.0e-55 218.8 207 58.9
TAR628G0904 Trochodendron aralioides HOM05D006972 ORTHO05D008519 6.8e-55 218.0 207 58.0
Oeu012451.1 Olea europaea HOM05D006972 ORTHO05D008519 3.4e-54 215.7 208 57.2
Actinidia17360 Actinidia chinensis HOM05D006972 ORTHO05D008519 2.8e-53 212.6 207 55.6
SalBow5G0785 Salvia bowleyana HOM05D006972 ORTHO05D008519 3.7e-53 212.2 207 56.5
Cfa007077 Carpinus fangiana HOM05D006972 ORTHO05D008519 4.8e-53 211.8 207 56.5
GSVIVG01026641001 Vitis vinifera HOM05D006972 ORTHO05D008519 8.3e-53 211.1 207 58.0
Haze_03655 Corylus avellana HOM05D006972 ORTHO05D008519 2.4e-52 209.5 199 57.8
QL06p052953 Quercus lobata HOM05D006972 ORTHO05D008519 2.4e-52 209.5 223 54.3
CSS0043244 Camellia sinensis var. sinensis HOM05D006972 ORTHO05D008519 7.0e-52 208.0 207 54.1
Nitab4.5_0000495g0120 Nicotiana tabacum HOM05D006972 ORTHO05D008519 7.0e-52 208.0 204 54.4
CiPaw.08G181600 Carya illinoinensis HOM05D006972 ORTHO05D008519 1.6e-51 206.8 207 55.6
Manes.01G155400 Manihot esculenta HOM05D006972 ORTHO05D008519 1.6e-51 206.8 199 57.3
Rhsim10G0195900 Rhododendron simsii HOM05D006972 ORTHO05D008519 1.6e-51 206.8 206 54.4
vmacro20633 Vaccinium macrocarpon HOM05D006972 ORTHO05D008519 2.0e-51 206.5 206 53.9
Atru.chr3.134 Acer truncatum HOM05D006972 ORTHO05D008519 3.5e-51 205.7 206 56.3
Migut.L00961 Erythranthe guttata HOM05D006972 ORTHO05D008519 4.5e-51 205.3 208 55.8
Nitab4.5_0005297g0020 Nicotiana tabacum HOM05D006972 ORTHO05D008519 5.9e-51 204.9 204 55.9
Prupe.7G182900 Prunus persica HOM05D006972 ORTHO05D008519 5.0e-50 201.8 207 55.1
Cpa.g.sc365.5 Carica papaya HOM05D006972 ORTHO05D008519 6.5e-50 201.4 207 54.1
CANSAT25G3183 Cannabis sativa HOM05D006972 ORTHO05D008519 1.1e-49 200.7 208 55.8
Solyc03g032120.3 Solanum lycopersicum HOM05D006972 ORTHO05D008519 1.9e-49 199.9 204 53.9
RcHm_v2.0_Chr2g0097181 Rosa chinensis HOM05D006972 ORTHO05D008519 3.3e-49 199.1 207 53.6
Ciclev10026547m.g Citrus clementina HOM05D006972 ORTHO05D008519 4.2e-49 198.7 206 52.4
Potri.005G101501 Populus trichocarpa HOM05D006972 ORTHO05D008519 7.2e-49 198.0 197 55.3
Aqoxy5G01011 Aquilegia oxysepala HOM05D006972 ORTHO05D008519 9.5e-49 197.6 208 53.4
Eucgr.I02225 Eucalyptus grandis HOM05D006972 ORTHO05D008519 9.5e-49 197.6 207 54.1
Lalb_Chr16g0380011 Lupinus albus HOM05D006972 ORTHO05D008519 1.2e-48 197.2 207 53.6
TPR.G33865 Trifolium pratense HOM05D006972 ORTHO05D008519 1.6e-48 196.8 211 54.0
ClCG10G000270 Citrullus lanatus HOM05D006972 ORTHO05D008519 3.6e-48 195.7 202 53.0
Cc07_g11850 Coffea canephora HOM05D006972 ORTHO05D008519 3.6e-48 195.7 210 54.3
MELO3C013724.2 Cucumis melo HOM05D006972 ORTHO05D008519 4.7e-48 195.3 204 52.0
Sed0027466 Sechium edule HOM05D006972 ORTHO05D008519 4.7e-48 195.3 204 52.9
Glyma.01G158800 Glycine max HOM05D006972 ORTHO05D008519 1.8e-47 193.4 207 52.7
Duzib147G0479 Durio zibethinus HOM05D006972 ORTHO05D008519 2.3e-47 193.0 206 52.4
TWI73G0968 Tripterygium wilfordii HOM05D006972 ORTHO05D008519 2.3e-47 193.0 206 52.9
FAN19G2622 Fragaria x ananassa HOM05D006972 ORTHO05D008519 3.0e-47 192.6 200 54.5
Ca_24981_v3 Cicer arietinum L. HOM05D006972 ORTHO05D008519 8.9e-47 191.0 211 52.6
Thecc.01G005600 Theobroma cacao HOM05D006972 ORTHO05D008519 8.9e-47 191.0 202 51.0
HanXRQChr14g0442531 Helianthus annuus HOM05D006972 ORTHO05D008519 2.6e-46 189.5 200 53.5
Phvul.002G116601 Phaseolus vulgaris HOM05D006972 ORTHO05D008519 9.8e-46 187.6 207 51.7
Psat2g148200 Pisum sativum HOM05D006972 ORTHO05D008519 2.2e-45 186.4 211 52.1
CsaV3_3G000300 Cucumis sativus L. HOM05D006972 ORTHO05D008519 2.8e-45 186.0 204 50.0
Lsat_1_v5_gn_2_73640 Lactuca sativa HOM05D006972 ORTHO05D008519 2.8e-45 186.0 200 54.5
Nn5g30989 Nelumbo nucifera HOM05D006972 ORTHO05D008519 2.8e-45 186.0 249 45.0
Gohir.A07G171100 Gossypium hirsutum HOM05D006972 ORTHO05D008519 3.7e-45 185.7 200 50.0
MBI05_g14344_MAGBIO Magnolia biondii HOM05D006972 ORTHO05D008519 3.7e-45 185.7 211 52.1
Gorai.001G199000 Gossypium raimondii HOM05D006972 ORTHO05D008519 1.1e-44 184.1 200 50.0
EL10Ac5g11121 Beta vulgaris HOM05D006972 ORTHO05D008519 2.4e-44 183.0 202 50.5
Gohir.D07G177900 Gossypium hirsutum HOM05D006972 ORTHO05D008519 2.4e-44 183.0 200 49.5
ECA238G2655 Erigeron canadensis HOM05D006972 ORTHO05D008519 4.1e-44 182.2 194 53.6
VMungo1215G1992 Vigna mungo HOM05D006972 ORTHO05D008519 4.1e-44 182.2 212 50.5
AL8G45620 Arabidopsis lyrata HOM05D006972 ORTHO05D008519 7.0e-44 181.4 195 50.3
AUR62021571 Chenopodium quinoa HOM05D006972 ORTHO05D008519 7.0e-44 181.4 207 49.3
AUR62008520 Chenopodium quinoa HOM05D006972 ORTHO05D008519 9.2e-44 181.0 203 49.8
Zm00001eb002450 Zea mays HOM05D006972 ORTHO05D008519 1.6e-43 180.3 205 48.3
AT5G66005 Arabidopsis thaliana HOM05D006972 ORTHO05D008519 4.5e-43 178.7 195 48.7
Ah.02g113990 Amaranthus hybridus HOM05D006972 ORTHO05D008519 7.8e-43 177.9 205 45.9
ATR0807G046 Amborella trichopoda HOM05D006972 ORTHO05D008519 1.0e-42 177.6 202 48.0
Hund19696 Selenicereus undatus HOM05D006972 ORTHO05D008519 1.0e-42 177.6 205 47.3
CAN.G354.14 Capsicum annuum HOM05D006972 ORTHO05D008519 2.3e-42 176.4 190 52.1
PSO541G2195 Papaver somniferum HOM05D006972 ORTHO05D008519 8.6e-42 174.5 199 50.8
THA.LOC104826441 Tarenaya hassleriana HOM05D006972 ORTHO05D008519 1.9e-41 173.3 207 45.9
HPP92_026034 Vanilla planifolia HOM05D006972 ORTHO05D008519 4.7e-40 168.7 203 46.8
SGA_v2.0_scaffold132G34519 Striga asiatica HOM05D006972 ORTHO05D008519 1.4e-39 167.2 184 53.8
Lj2g0018473 Lotus japonicus HOM05D006972 ORTHO05D008519 5.2e-39 165.2 188 50.0
CDE04G1133 Ceratophyllum demersum HOM05D006972 ORTHO05D008519 8.9e-39 164.5 191 45.5
Haze_03661 Corylus avellana HOM05D006972 ORTHO05D008519 4.4e-38 162.2 168 55.4
PSO675G3277 Papaver somniferum HOM05D006972 ORTHO05D008519 5.8e-38 161.8 177 50.3
Carub.0008s2851 Capsella rubella HOM05D006972 ORTHO05D008519 7.5e-38 161.4 220 44.1
COL.COLO4_24144 Corchorus olitorius HOM05D006972 ORTHO05D008519 1.2e-35 154.1 177 50.3
arahy.Tifrunner.gnm1.ann1.B19VPR Arachis hypogaea HOM05D006972 ORTHO05D008519 1.6e-35 153.7 179 50.3
arahy.Tifrunner.gnm1.ann1.K20VQB Arachis hypogaea HOM05D006972 ORTHO05D008519 1.6e-35 153.7 179 50.3
FAN23G2574 Fragaria x ananassa HOM05D006972 ORTHO05D008519 3.5e-35 152.5 245 42.0
Medtr5g024200 Medicago truncatula HOM05D006972 ORTHO05D008519 4.6e-35 152.1 178 52.8
FvH4_1g10330 Fragaria vesca HOM05D006972 ORTHO05D008519 3.9e-34 149.1 168 51.8
Sc03g0003950 Simmondsia chinensis HOM05D006972 ORTHO05D008519 2.1e-32 143.3 169 50.9
Peaxi162Scf00122g02416 Petunia axillaris HOM05D006972 ORTHO05D008519 2.0e-30 136.7 89 74.2
CANSAT35G0485 Cannabis sativa HOM05D006972 ORTHO05D008519 4.4e-30 135.6 95 72.6
MD15G1231300 Malus domestica HOM05D006972 ORTHO05D008519 5.4e-28 128.6 92 65.2
Os03g0130750 Oryza sativa ssp. japonica HOM05D006972 ORTHO05D008519 7.0e-28 128.3 92 65.2
RcHm_v2.0_Chr2g0090391 Rosa chinensis HOM05D006972 ORTHO05D008519 5.1e-26 122.1 152 46.7
RcHm_v2.0_Chr1g0346531 Rosa chinensis HOM05D006972 ORTHO05D008519 1.9e-25 120.2 152 46.7
Mapoly0114s0024 Marchantia polymorpha HOM05D006972 ORTHO05D008519 1.8e-23 113.6 219 36.5
Actinidia22899 Actinidia chinensis HOM05D006972 ORTHO05D008519 2.3e-23 113.2 76 71.1
Sopen03g005970 Solanum pennellii HOM05D006972 ORTHO05D008519 1.1e-17 94.4 54 74.1
FAN26G0227 Fragaria x ananassa HOM05D006972 ORTHO05D008519 9.5e-17 91.3 168 39.9
MD15G1231400 Malus domestica HOM05D006972 ORTHO05D008519 3.6e-16 89.4 54 75.9
FAN28G2862 Fragaria x ananassa HOM05D006972 ORTHO05D008519 2.6e-14 83.2 52 76.9
RcHm_v2.0_Chr5g0015201 Rosa chinensis HOM05D006972 ORTHO05D008519 9.9e-14 81.3 52 73.1
SMO352G0055 Selaginella moellendorffii HOM05D006972 ORTHO05D008519 1.7e-13 80.5 151 37.1
Cre16.g682050 Chlamydomonas reinhardtii HOM05D006972 ORTHO05D008519 6.4e-13 78.6 199 32.7
arahy.Tifrunner.gnm1.ann1.J6JT3S Arachis hypogaea HOM05D006972 ORTHO05D008519 9.2e-12 74.7 54 63.0
RcHm_v2.0_Chr5g0047551 Rosa chinensis HOM05D006972 ORTHO05D008519 1.6e-11 73.9 52 67.3
Glyma.11G085800 Glycine max HOM05D006972 ORTHO05D008519 1.0e-10 71.2 92 43.5
Pp3c7_7150 Physcomitrium patens HOM05D006972 ORTHO05D008519 1.0e-10 71.2 201 29.9
Mapoly0023s0154 Marchantia polymorpha HOM05D006972 ORTHO05D008519 3.3e-09 66.2 203 28.1
Pp3c11_19180 Physcomitrium patens HOM05D006972 ORTHO05D008519 4.3e-09 65.9 201 27.9
MCO16G109 Micromonas commoda HOM05D006972 ORTHO05D008519 7.3e-09 65.1 191 29.8
MD02G1111700 Malus domestica HOM05D006972 ORTHO05D008519 1.1e-07 61.2 40 67.5
SMO147G0393 Selaginella moellendorffii HOM05D006972 ORTHO05D008519 3.1e-07 59.7 143 25.9
arahy.Tifrunner.gnm1.ann1.9GY3HT Arachis hypogaea HOM05D006972 ORTHO05D008519 5.3e-07 58.9 53 56.6
Lsat_1_v5_gn_1_125281 Lactuca sativa HOM05D006972 ORTHO05D008519 1.5e-06 57.4 34 82.4
RcHm_v2.0_Chr5g0015211 Rosa chinensis HOM05D006972 ORTHO05D008519 3.4e-06 56.2 33 75.8
Lsat_1_v5_gn_5_10160 Lactuca sativa HOM05D006972 ORTHO05D008519 9.9e-06 54.7 34 76.5


User provided reference genes

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