Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_747.g21800 Utricularia gibba HOM05D006889 ORTHO05D008614 3.9e-172 608.2 349 100.0
SalBow3G4178 Salvia bowleyana HOM05D006889 ORTHO05D008614 2.2e-106 389.8 379 67.5
Migut.F00816 Erythranthe guttata HOM05D006889 ORTHO05D008614 2.9e-106 389.4 359 63.2
SGA_v2.0_scaffold62G21307 Striga asiatica HOM05D006889 ORTHO05D008614 2.3e-100 369.8 380 60.3
ECA238G0057 Erigeron canadensis HOM05D006889 ORTHO05D008614 2.1e-96 356.7 366 62.3
Oeu033252.2 Olea europaea HOM05D006889 ORTHO05D008614 5.1e-95 352.1 400 55.2
Solyc04g009830.3 Solanum lycopersicum HOM05D006889 ORTHO05D008614 3.3e-94 349.4 356 61.8
Sopen04g004970 Solanum pennellii HOM05D006889 ORTHO05D008614 3.3e-94 349.4 356 62.9
Atru.chr12.2063 Acer truncatum HOM05D006889 ORTHO05D008614 1.1e-92 344.4 360 63.1
Cc02_g09110 Coffea canephora HOM05D006889 ORTHO05D008614 1.5e-91 340.5 348 58.9
Dinv25463 Davidia involucrata HOM05D006889 ORTHO05D008614 1.5e-91 340.5 362 56.1
Lalb_Chr13g0293181 Lupinus albus HOM05D006889 ORTHO05D008614 3.8e-90 335.9 359 59.6
QL09p026702 Quercus lobata HOM05D006889 ORTHO05D008614 3.2e-89 332.8 352 61.6
GSVIVG01024467001 Vitis vinifera HOM05D006889 ORTHO05D008614 3.2e-89 332.8 353 61.2
PGSC0003DMG400025437 Solanum tuberosum HOM05D006889 ORTHO05D008614 7.1e-89 331.6 375 58.9
Thecc.06G017600 Theobroma cacao HOM05D006889 ORTHO05D008614 1.6e-88 330.5 349 60.7
RcHm_v2.0_Chr1g0383401 Rosa chinensis HOM05D006889 ORTHO05D008614 3.5e-88 329.3 350 59.1
HanXRQChr07g0200571 Helianthus annuus HOM05D006889 ORTHO05D008614 1.3e-87 327.4 375 57.6
Ciclev10012044m.g Citrus clementina HOM05D006889 ORTHO05D008614 5.1e-87 325.5 349 60.5
Nn6g34807 Nelumbo nucifera HOM05D006889 ORTHO05D008614 5.1e-87 325.5 366 60.4
CSS0010313 Camellia sinensis var. sinensis HOM05D006889 ORTHO05D008614 8.6e-87 324.7 336 58.0
Gorai.010G175600 Gossypium raimondii HOM05D006889 ORTHO05D008614 1.5e-86 323.9 357 58.5
Haze_22241 Corylus avellana HOM05D006889 ORTHO05D008614 3.3e-86 322.8 343 64.4
FAN03G0535 Fragaria x ananassa HOM05D006889 ORTHO05D008614 7.3e-86 321.6 349 56.2
Prupe.2G323000 Prunus persica HOM05D006889 ORTHO05D008614 7.3e-86 321.6 350 58.0
Gohir.A06G144633 Gossypium hirsutum HOM05D006889 ORTHO05D008614 1.2e-85 320.9 349 59.3
THA.LOC104805469 Tarenaya hassleriana HOM05D006889 ORTHO05D008614 1.6e-85 320.5 349 60.5
FvH4_7g33430 Fragaria vesca HOM05D006889 ORTHO05D008614 1.4e-84 317.4 349 57.0
Lj4g0013326 Lotus japonicus HOM05D006889 ORTHO05D008614 1.4e-84 317.4 356 57.0
CDE08G0956 Ceratophyllum demersum HOM05D006889 ORTHO05D008614 3.1e-84 316.2 345 59.4
FAN10G1689 Fragaria x ananassa HOM05D006889 ORTHO05D008614 3.1e-84 316.2 349 55.9
TAR369G0178 Trochodendron aralioides HOM05D006889 ORTHO05D008614 3.1e-84 316.2 347 57.9
Glyma.05G136000 Glycine max HOM05D006889 ORTHO05D008614 5.2e-84 315.5 350 60.6
vmacro10779 Vaccinium macrocarpon HOM05D006889 ORTHO05D008614 5.2e-84 315.5 348 63.5
Manes.09G119000 Manihot esculenta HOM05D006889 ORTHO05D008614 6.9e-84 315.1 348 59.8
FAN10G2743 Fragaria x ananassa HOM05D006889 ORTHO05D008614 1.2e-83 314.3 349 55.6
PSO384G0326 Papaver somniferum HOM05D006889 ORTHO05D008614 1.2e-83 314.3 360 56.1
Nitab4.5_0002651g0040 Nicotiana tabacum HOM05D006889 ORTHO05D008614 2.6e-83 313.2 345 62.6
Hma1.2p1_0164F.1_g073300 Hydrangea macrophylla HOM05D006889 ORTHO05D008614 1.7e-82 310.5 294 64.6
Eucgr.K00107 Eucalyptus grandis HOM05D006889 ORTHO05D008614 3.8e-82 309.3 360 53.6
MSTRG.4328 Avicennia marina HOM05D006889 ORTHO05D008614 1.4e-81 307.4 349 60.7
Carub.0004s1859 Capsella rubella HOM05D006889 ORTHO05D008614 2.4e-81 306.6 350 53.1
AL4G32960 Arabidopsis lyrata HOM05D006889 ORTHO05D008614 5.4e-81 305.4 342 53.5
AT2G36740 Arabidopsis thaliana HOM05D006889 ORTHO05D008614 5.4e-81 305.4 342 53.5
Cpa.g.sc140.53 Carica papaya HOM05D006889 ORTHO05D008614 5.4e-81 305.4 342 59.1
Potri.001G412800 Populus trichocarpa HOM05D006889 ORTHO05D008614 3.5e-80 302.8 347 59.4
BraA05t19868Z Brassica rapa HOM05D006889 ORTHO05D008614 4.6e-80 302.4 350 54.6
Ca_18207_v3 Cicer arietinum L. HOM05D006889 ORTHO05D008614 4.6e-80 302.4 366 54.4
Phvul.002G186100 Phaseolus vulgaris HOM05D006889 ORTHO05D008614 4.6e-80 302.4 358 55.6
Aqoxy4G02722 Aquilegia oxysepala HOM05D006889 ORTHO05D008614 6.0e-80 302.0 353 56.1
A05p09120 Brassica napus HOM05D006889 ORTHO05D008614 7.8e-80 301.6 350 54.6
C04p11290 Brassica napus HOM05D006889 ORTHO05D008614 7.8e-80 301.6 348 54.9
BolC4t22783H Brassica oleracea HOM05D006889 ORTHO05D008614 7.8e-80 301.6 348 54.9
CAN.G186.71 Capsicum annuum HOM05D006889 ORTHO05D008614 7.8e-80 301.6 330 57.0
BcaC02g11793 Brassica carinata HOM05D006889 ORTHO05D008614 1.0e-79 301.2 348 54.9
BolC4t22767H Brassica oleracea HOM05D006889 ORTHO05D008614 1.0e-79 301.2 348 54.9
Actinidia31405 Actinidia chinensis HOM05D006889 ORTHO05D008614 3.0e-79 299.7 294 65.0
CiPaw.07G182100 Carya illinoinensis HOM05D006889 ORTHO05D008614 3.0e-79 299.7 329 64.1
TWI60G1635 Tripterygium wilfordii HOM05D006889 ORTHO05D008614 1.1e-78 297.7 366 53.3
MBI14_g11688_MAGBIO Magnolia biondii HOM05D006889 ORTHO05D008614 1.5e-78 297.4 357 60.8
Aa31LG5G21960 Aethionema arabicum HOM05D006889 ORTHO05D008614 3.3e-78 296.2 356 51.7
FAN01G0055 Fragaria x ananassa HOM05D006889 ORTHO05D008614 4.3e-78 295.8 338 53.6
PSO339G0304 Papaver somniferum HOM05D006889 ORTHO05D008614 9.6e-78 294.7 360 54.2
Sabra16G0274900 Salix brachista HOM05D006889 ORTHO05D008614 6.2e-77 292.0 368 55.2
Sabra16G0274600 Salix brachista HOM05D006889 ORTHO05D008614 6.9e-76 288.5 386 54.1
Os08g0192400 Oryza sativa ssp. japonica HOM05D006889 ORTHO05D008614 2.2e-74 283.5 354 54.2
Nitab4.5_0000930g0060 Nicotiana tabacum HOM05D006889 ORTHO05D008614 3.8e-74 282.7 347 60.2
arahy.Tifrunner.gnm1.ann1.T52I9D Arachis hypogaea HOM05D006889 ORTHO05D008614 1.4e-73 280.8 369 55.0
HPP92_000052 Vanilla planifolia HOM05D006889 ORTHO05D008614 7.1e-73 278.5 340 54.7
CsaV3_5G005080 Cucumis sativus L. HOM05D006889 ORTHO05D008614 2.1e-72 276.9 340 57.4
Psat7g087400 Pisum sativum HOM05D006889 ORTHO05D008614 2.7e-72 276.6 369 52.6
Sed0014561 Sechium edule HOM05D006889 ORTHO05D008614 4.6e-72 275.8 348 54.6
BcaB02g09334 Brassica carinata HOM05D006889 ORTHO05D008614 6.0e-72 275.4 359 49.0
arahy.Tifrunner.gnm1.ann1.I4BD9U Arachis hypogaea HOM05D006889 ORTHO05D008614 1.5e-70 270.8 399 51.6
Hund18033 Selenicereus undatus HOM05D006889 ORTHO05D008614 4.8e-69 265.8 370 52.4
ATR0081G022 Amborella trichopoda HOM05D006889 ORTHO05D008614 6.2e-69 265.4 299 59.9
Lsat_1_v5_gn_2_107601 Lactuca sativa HOM05D006889 ORTHO05D008614 1.1e-68 264.6 342 55.3
MD07G1304400 Malus domestica HOM05D006889 ORTHO05D008614 2.6e-67 260.0 350 51.7
Gohir.D06G150400 Gossypium hirsutum HOM05D006889 ORTHO05D008614 1.3e-63 247.7 268 54.9
Sc08g0005450 Simmondsia chinensis HOM05D006889 ORTHO05D008614 7.4e-62 241.9 289 55.7
Peaxi162Scf00135g00913 Petunia axillaris HOM05D006889 ORTHO05D008614 2.1e-61 240.4 308 58.4
Thhalv10016833m.g Eutrema salsugineum HOM05D006889 ORTHO05D008614 2.8e-61 240.0 350 45.1
Sp4g19020 Schrenkiella parvula HOM05D006889 ORTHO05D008614 6.2e-61 238.8 351 45.0
Rhsim01G0067600 Rhododendron simsii HOM05D006889 ORTHO05D008614 8.2e-61 238.4 364 48.6
Rhsim09G0213900 Rhododendron simsii HOM05D006889 ORTHO05D008614 8.2e-61 238.4 368 48.6
Ah.14g084260 Amaranthus hybridus HOM05D006889 ORTHO05D008614 1.8e-60 237.3 341 48.1
EL10Ac8g18884 Beta vulgaris HOM05D006889 ORTHO05D008614 3.1e-60 236.5 394 48.5
Zm00001eb260210 Zea mays HOM05D006889 ORTHO05D008614 5.3e-60 235.7 271 52.8
MD07G1075300 Malus domestica HOM05D006889 ORTHO05D008614 1.5e-59 234.2 366 47.8
MELO3C005447.2 Cucumis melo HOM05D006889 ORTHO05D008614 2.5e-57 226.9 256 63.7
CARHR131100 Cardamine hirsuta HOM05D006889 ORTHO05D008614 1.6e-56 224.2 355 44.5
PGR142G0052 Punica granatum HOM05D006889 ORTHO05D008614 2.1e-56 223.8 367 46.0
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 4.8e-53 212.6 322 44.1
Pp3c14_17650 Physcomitrium patens HOM05D006889 ORTHO05D008614 2.6e-51 206.8 299 51.8
TPR.G11931 Trifolium pratense HOM05D006889 ORTHO05D008614 4.6e-48 196.1 356 47.2
AUR62028393 Chenopodium quinoa HOM05D006889 ORTHO05D008614 2.3e-47 193.7 397 43.6
AUR62039766 Chenopodium quinoa HOM05D006889 ORTHO05D008614 2.5e-46 190.3 235 62.1
SMO165G0047 Selaginella moellendorffii HOM05D006889 ORTHO05D008614 4.1e-44 183.0 327 40.4
SEGI_10499 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 2.5e-41 173.7 264 50.0
COL.COLO4_31129 Corchorus olitorius HOM05D000112 ORTHO05D000564 5.1e-39 166.0 305 44.6
DCAR_030020 Daucus carota HOM05D006889 ORTHO05D008614 1.3e-37 161.4 262 41.6
Mapoly0001s0482 Marchantia polymorpha HOM05D006889 ORTHO05D008614 5.3e-36 156.0 224 44.6
Gohir.D08G083500 Gossypium hirsutum HOM05D006889 ORTHO05D008614 3.8e-34 149.8 169 53.3
TPR.G8913 Trifolium pratense HOM05D006889 ORTHO05D008614 1.4e-31 141.4 117 70.1
Gorai.004G087700 Gossypium raimondii HOM05D006889 ORTHO05D008614 3.0e-31 140.2 192 47.4
CBR_g38961 Chara braunii HOM05D006889 ORTHO05D008614 2.2e-29 134.0 341 39.6
SEGI_12666 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 4.5e-27 126.3 157 48.4
ClCG01G004860 Citrullus lanatus HOM05D006889 ORTHO05D008614 1.4e-23 114.8 186 54.3
TPR.G34755 Trifolium pratense HOM05D006889 ORTHO05D008614 2.7e-16 90.5 55 87.3
SHI02511 Sapria himalayana HOM05D006889 ORTHO05D008614 6.8e-15 85.9 59 79.7
Cre17.g728200 Chlamydomonas reinhardtii HOM05D006889 ORTHO05D008614 7.0e-12 75.9 299 31.1
MCO15G439 Micromonas commoda HOM05D006889 ORTHO05D008614 1.2e-11 75.1 311 32.5
Gohir.D02G011800 Gossypium hirsutum HOM05D004753 ORTHO05D005920 8.6e-10 68.9 172 37.8
Gorai.005G015000 Gossypium raimondii HOM05D004753 ORTHO05D005920 1.1e-09 68.6 169 37.3
PRCOL_00000609 Prasinoderma coloniale HOM05D006889 ORTHO05D008614 5.5e-09 66.2 130 35.4
SHI02510 Sapria himalayana HOM05D006889 ORTHO05D008614 3.6e-08 63.5 38 73.7
SHI02512 Sapria himalayana HOM05D006889 ORTHO05D008614 3.6e-08 63.5 83 47.0
Gohir.D04G081932 Gossypium hirsutum HOM05D004753 ORTHO05D005920 4.7e-08 63.2 67 53.7
FAN28G2910 Fragaria x ananassa HOM05D006889 ORTHO05D008614 1.8e-07 61.2 135 38.5


User provided reference genes

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