Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_747.g21780 Utricularia gibba HOM05D000063 ORTHO05D004572 3.5e-92 341.7 178 100.0
unitig_0.g1754 Utricularia gibba HOM05D000063 ORTHO05D004572 1.3e-46 190.3 159 66.0
Oeu022603.1 Olea europaea HOM05D000063 ORTHO05D004572 3.7e-25 119.0 191 45.0
unitig_52.g17738 Utricularia gibba HOM05D000063 ORTHO05D004572 2.0e-23 113.2 156 46.2
MSTRG.77 Avicennia marina HOM05D000063 ORTHO05D004572 2.9e-22 109.4 184 41.3
SGA_v2.0_scaffold44G16744 Striga asiatica HOM05D000063 ORTHO05D004572 2.5e-21 106.3 179 38.5
MSTRG.8472 Avicennia marina HOM05D000063 ORTHO05D004572 7.9e-20 101.3 188 40.4
Migut.F01094 Erythranthe guttata HOM05D000063 ORTHO05D004572 7.9e-20 101.3 179 41.9
Migut.F00310 Erythranthe guttata HOM05D000063 ORTHO05D004572 3.9e-19 99.0 198 38.4
MSTRG.27093 Avicennia marina HOM05D000063 ORTHO05D004572 2.4e-16 89.7 183 37.7
MSTRG.8719 Avicennia marina HOM05D000063 ORTHO05D004572 6.9e-16 88.2 183 35.0
Hma1.2p1_0327F.1_g126280 Hydrangea macrophylla HOM05D000063 ORTHO05D004572 2.6e-15 86.3 169 39.1
TAR375G0844 Trochodendron aralioides HOM05D000063 ORTHO05D004572 1.7e-14 83.6 161 37.3
Actinidia20865 Actinidia chinensis HOM05D000063 ORTHO05D004572 2.2e-14 83.2 187 39.0
PGR042G1919 Punica granatum HOM05D000063 ORTHO05D004572 5.0e-14 82.0 141 40.4
Actinidia34146 Actinidia chinensis HOM05D000063 ORTHO05D004572 8.5e-14 81.3 199 39.2
Dinv35238 Davidia involucrata HOM05D000063 ORTHO05D004572 1.4e-13 80.5 190 38.9
CAN.G527.5 Capsicum annuum HOM05D000063 ORTHO05D004572 3.2e-13 79.3 171 38.6
Dinv28398 Davidia involucrata HOM05D000063 ORTHO05D004572 5.5e-13 78.6 199 35.2
SGA_v2.0_scaffold60G21095 Striga asiatica HOM05D000063 ORTHO05D004572 5.5e-13 78.6 167 34.7
CSS0037839 Camellia sinensis var. sinensis HOM05D000063 ORTHO05D004572 6.1e-12 75.1 147 37.4
Hma1.2p1_0227F.1_g096110 Hydrangea macrophylla HOM05D000063 ORTHO05D004572 1.8e-11 73.6 196 37.8
Rhsim03G0189900 Rhododendron simsii HOM05D000063 ORTHO05D004572 8.8e-11 71.2 202 36.1
Sopen06g011970 Solanum pennellii HOM05D000063 ORTHO05D004572 5.7e-10 68.6 171 36.3
Solyc06g036170.1 Solanum lycopersicum HOM05D000063 ORTHO05D004572 9.7e-10 67.8 171 36.3
DCAR_009383 Daucus carota HOM05D000063 ORTHO05D004572 1.7e-09 67.0 158 37.3
Lsat_1_v5_gn_8_6721 Lactuca sativa HOM05D000063 ORTHO05D004572 1.7e-09 67.0 189 30.7
Peaxi162Scf00444g00001 Petunia axillaris HOM05D000063 ORTHO05D004572 1.7e-09 67.0 201 31.8
TAR629G3249 Trochodendron aralioides HOM05D000063 ORTHO05D004572 1.7e-09 67.0 161 36.0
Peaxi162Scf00848g00031 Petunia axillaris HOM05D000063 ORTHO05D004572 2.8e-09 66.2 141 39.0
Sopen03g004020 Solanum pennellii HOM05D000063 ORTHO05D004572 3.7e-09 65.9 200 32.5
PGSC0003DMG400029921 Solanum tuberosum HOM05D000063 ORTHO05D004572 3.7e-09 65.9 179 34.6
Glyma.10G232000 Glycine max HOM05D000063 ORTHO05D004572 6.3e-09 65.1 164 34.8
Solyc03g025170.1 Solanum lycopersicum HOM05D000063 ORTHO05D004572 6.3e-09 65.1 202 32.2
Thecc.03G182300 Theobroma cacao HOM05D000063 ORTHO05D004572 6.3e-09 65.1 169 36.1
Haze_00031 Corylus avellana HOM05D000063 ORTHO05D004572 1.1e-08 64.3 217 32.3
vmacro06640 Vaccinium macrocarpon HOM05D000063 ORTHO05D004572 1.1e-08 64.3 202 32.7
Lj5g0025817 Lotus japonicus HOM05D000063 ORTHO05D004572 1.4e-08 63.9 184 32.6
Glyma.09G133600 Glycine max HOM05D000063 ORTHO05D004572 2.4e-08 63.2 181 30.9
VMungo0720G2240 Vigna mungo HOM05D000063 ORTHO05D004572 3.1e-08 62.8 144 36.1
Cfa016277 Carpinus fangiana HOM05D000063 ORTHO05D004572 5.3e-08 62.0 214 31.3
COL.COLO4_28017 Corchorus olitorius HOM05D000063 ORTHO05D004572 5.3e-08 62.0 168 35.7
CANSAT21G2483 Cannabis sativa HOM05D000063 ORTHO05D004572 9.1e-08 61.2 186 35.5
Nitab4.5_0000572g0020 Nicotiana tabacum HOM05D000063 ORTHO05D004572 1.2e-07 60.8 214 30.8
Ca_10733_v3 Cicer arietinum L. HOM05D000063 ORTHO05D004572 2.6e-07 59.7 101 38.6
DCAR_010666 Daucus carota HOM05D000063 ORTHO05D004572 2.6e-07 59.7 170 31.8
Eucgr.A02754 Eucalyptus grandis HOM05D000063 ORTHO05D004572 2.6e-07 59.7 188 34.6
Glyma.16G179900 Glycine max HOM05D000063 ORTHO05D004572 2.6e-07 59.7 179 30.2
Phvul.007G073500 Phaseolus vulgaris HOM05D000063 ORTHO05D004572 2.6e-07 59.7 167 33.5
CANSAT21G0914 Cannabis sativa HOM05D000063 ORTHO05D004572 3.5e-07 59.3 187 33.2
Gohir.A11G011600 Gossypium hirsutum HOM05D000063 ORTHO05D004572 3.5e-07 59.3 168 34.5
Sed0005314 Sechium edule HOM05D000063 ORTHO05D004572 3.5e-07 59.3 163 33.7
Manes.06G151400 Manihot esculenta HOM05D000063 ORTHO05D004572 4.5e-07 58.9 176 38.6
Lsat_1_v5_gn_2_131100 Lactuca sativa HOM05D000063 ORTHO05D004572 5.9e-07 58.5 163 33.1
Manes.14G023500 Manihot esculenta HOM05D000063 ORTHO05D004572 1.0e-06 57.8 179 31.3
Prupe.2G299400 Prunus persica HOM05D000063 ORTHO05D004572 1.0e-06 57.8 166 33.7
SalBow4G2114 Salvia bowleyana HOM05D000063 ORTHO05D004572 1.0e-06 57.8 52 55.8
MELO3C005834.2 Cucumis melo HOM05D000063 ORTHO05D004572 1.7e-06 57.0 149 35.6
TWI23G0174 Tripterygium wilfordii HOM05D000063 ORTHO05D004572 2.2e-06 56.6 177 33.3
ClCG01G000970 Citrullus lanatus HOM05D000063 ORTHO05D004572 3.8e-06 55.8 163 36.2
Gorai.006G198300 Gossypium raimondii HOM05D000063 ORTHO05D004572 6.5e-06 55.1 166 34.3
HanXRQChr13g0396301 Helianthus annuus HOM05D000063 ORTHO05D004572 6.5e-06 55.1 201 30.3


User provided reference genes

Program Settings