Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_747.g21761 Utricularia gibba HOM05D007174 ORTHO05D009061 5.6e-127 457.6 229 100.0
Nitab4.5_0008764g0010 Nicotiana tabacum HOM05D007174 ORTHO05D009061 5.2e-48 195.3 202 52.0
Nitab4.5_0000832g0170 Nicotiana tabacum HOM05D007174 ORTHO05D009061 1.5e-47 193.7 202 52.0
HanXRQChr15g0473391 Helianthus annuus HOM05D000003 ORTHO05D000004 7.5e-47 191.4 197 54.3
Cpa.g.sc3.335 Carica papaya HOM05D007174 ORTHO05D009061 1.3e-46 190.7 205 49.8
CsaV3_3G016740 Cucumis sativus L. HOM05D007174 ORTHO05D009061 2.2e-46 189.9 209 50.2
Duzib205G1938 Durio zibethinus HOM05D007174 ORTHO05D009061 8.3e-46 188.0 187 55.1
MELO3C006867.2 Cucumis melo HOM05D007174 ORTHO05D009061 1.1e-45 187.6 203 51.2
Gorai.008G280800 Gossypium raimondii HOM05D007174 ORTHO05D009061 1.1e-45 187.6 179 54.2
Peaxi162Scf00648g00220 Petunia axillaris HOM05D007174 ORTHO05D009061 1.4e-45 187.2 214 48.6
Thecc.03G169500 Theobroma cacao HOM05D007174 ORTHO05D009061 1.8e-45 186.8 185 52.4
COL.COLO4_14250 Corchorus olitorius HOM05D000059 ORTHO05D005093 3.2e-45 186.0 185 54.1
FvH4_7g28911 Fragaria vesca HOM05D007174 ORTHO05D009061 4.1e-45 185.7 201 51.2
FAN06G1461 Fragaria x ananassa HOM05D000059 ORTHO05D005093 4.1e-45 185.7 201 51.2
ClCG05G007760 Citrullus lanatus HOM05D002642 ORTHO05D002834 5.4e-45 185.3 208 49.5
Sed0014335 Sechium edule HOM05D002642 ORTHO05D002834 5.4e-45 185.3 186 54.8
Dinv35170 Davidia involucrata HOM05D007174 ORTHO05D009061 7.0e-45 184.9 219 50.7
CAN.G548.22 Capsicum annuum HOM05D007174 ORTHO05D009061 9.2e-45 184.5 185 51.9
SalBow4G1508 Salvia bowleyana HOM05D007174 ORTHO05D009061 9.2e-45 184.5 213 49.8
arahy.Tifrunner.gnm1.ann1.CGP099 Arachis hypogaea HOM05D007174 ORTHO05D009061 1.2e-44 184.1 189 51.9
CSS0029278 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 1.6e-44 183.7 185 53.0
CSS0030546 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 1.6e-44 183.7 204 50.0
Gohir.A12G261100 Gossypium hirsutum HOM05D007174 ORTHO05D009061 1.6e-44 183.7 179 53.1
PGSC0003DMG400014262 Solanum tuberosum HOM05D007174 ORTHO05D009061 1.6e-44 183.7 200 49.0
MD01G1195800 Malus domestica HOM05D007174 ORTHO05D009061 2.0e-44 183.3 211 49.3
Potri.012G134500 Populus trichocarpa HOM05D007174 ORTHO05D009061 2.7e-44 183.0 206 50.0
Rhsim09G0195900 Rhododendron simsii HOM05D007174 ORTHO05D009061 3.5e-44 182.6 183 53.6
arahy.Tifrunner.gnm1.ann1.AW02WS Arachis hypogaea HOM05D007174 ORTHO05D009061 7.8e-44 181.4 189 51.3
CSS0008795 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 1.3e-43 180.6 191 51.3
FAN01G2691 Fragaria x ananassa HOM05D000059 ORTHO05D005093 1.3e-43 180.6 201 50.7
QL09p015458 Quercus lobata HOM05D007174 ORTHO05D009061 1.3e-43 180.6 214 48.1
vmacro09863 Vaccinium macrocarpon HOM05D007174 ORTHO05D009061 1.3e-43 180.6 185 52.4
Eucgr.K00215 Eucalyptus grandis HOM05D007174 ORTHO05D009061 1.7e-43 180.3 206 48.5
Lj2g0011010 Lotus japonicus HOM05D007174 ORTHO05D009061 1.7e-43 180.3 217 47.0
Manes.14G029900 Manihot esculenta HOM05D007174 ORTHO05D009061 1.7e-43 180.3 208 49.5
FAN03G3394 Fragaria x ananassa HOM05D000059 ORTHO05D005093 2.3e-43 179.9 201 49.3
Glyma.09G147500 Glycine max HOM05D007174 ORTHO05D009061 2.3e-43 179.9 203 46.8
TPR.G9185 Trifolium pratense HOM05D007174 ORTHO05D009061 2.3e-43 179.9 206 49.0
GSVIVG01010637001 Vitis vinifera HOM05D007174 ORTHO05D009061 2.3e-43 179.9 203 48.3
EL10Ac3g05680 Beta vulgaris HOM05D007174 ORTHO05D009061 2.9e-43 179.5 179 55.3
TAR374G0585 Trochodendron aralioides HOM05D007174 ORTHO05D009061 3.9e-43 179.1 198 50.0
Ciclev10005753m.g Citrus clementina HOM05D007174 ORTHO05D009061 5.0e-43 178.7 209 48.3
Migut.F00385 Erythranthe guttata HOM05D007174 ORTHO05D009061 5.0e-43 178.7 219 47.9
Lsat_1_v5_gn_9_53840 Lactuca sativa HOM05D007174 ORTHO05D009061 5.0e-43 178.7 181 53.6
PGR142G4376 Punica granatum HOM05D007174 ORTHO05D009061 5.0e-43 178.7 205 48.8
Lj6g0017578 Lotus japonicus HOM05D007174 ORTHO05D009061 6.6e-43 178.3 219 47.0
MSTRG.27141 Avicennia marina HOM05D007174 ORTHO05D009061 8.6e-43 177.9 188 51.6
AUR62016040 Chenopodium quinoa HOM05D007174 ORTHO05D009061 1.5e-42 177.2 183 51.4
Sabra12G0101100 Salix brachista HOM05D007174 ORTHO05D009061 1.5e-42 177.2 202 49.0
Sopen03g005220 Solanum pennellii HOM05D007174 ORTHO05D009061 1.9e-42 176.8 200 47.5
CANSAT21G1580 Cannabis sativa HOM05D007174 ORTHO05D009061 3.3e-42 176.0 204 48.5
CiPaw.04G068400 Carya illinoinensis HOM05D007174 ORTHO05D009061 4.3e-42 175.6 215 47.4
Lalb_Chr19g0131081 Lupinus albus HOM05D007174 ORTHO05D009061 4.3e-42 175.6 197 50.3
Medtr6g465290 Medicago truncatula HOM05D007174 ORTHO05D009061 4.3e-42 175.6 184 51.1
Lj1A990G55 Lonicera japonica HOM05D007174 ORTHO05D009061 5.6e-42 175.3 189 51.3
arahy.Tifrunner.gnm1.ann1.09T8EW Arachis hypogaea HOM05D007174 ORTHO05D009061 7.3e-42 174.9 178 51.1
Phvul.004G122400 Phaseolus vulgaris HOM05D007174 ORTHO05D009061 9.5e-42 174.5 222 45.9
Aqoxy7G00468 Aquilegia oxysepala HOM05D007174 ORTHO05D009061 1.2e-41 174.1 187 50.8
Haze_13772 Corylus avellana HOM05D007174 ORTHO05D009061 1.2e-41 174.1 198 50.0
Glyma.16G199500 Glycine max HOM05D007174 ORTHO05D009061 1.6e-41 173.7 200 48.0
FAN03G1635 Fragaria x ananassa HOM05D000059 ORTHO05D005093 2.1e-41 173.3 201 48.3
Psat1g105240 Pisum sativum HOM05D007174 ORTHO05D009061 2.1e-41 173.3 180 51.1
DCAR_018153 Daucus carota HOM05D007174 ORTHO05D009061 3.6e-41 172.6 211 46.4
Os02g0677600 Oryza sativa ssp. japonica HOM05D007174 ORTHO05D009061 4.7e-41 172.2 182 52.2
Prupe.2G289100 Prunus persica HOM05D007174 ORTHO05D009061 1.8e-40 170.2 182 51.1
SGA_v2.0_scaffold2G01087 Striga asiatica HOM05D007174 ORTHO05D009061 2.3e-40 169.9 208 48.1
Zm00001eb187200 Zea mays HOM05D007174 ORTHO05D009061 3.1e-40 169.5 204 48.5
FAN10G2932 Fragaria x ananassa HOM05D000059 ORTHO05D005093 4.0e-40 169.1 201 47.8
Sc25g0000350 Simmondsia chinensis HOM05D007174 ORTHO05D009061 5.2e-40 168.7 182 52.7
Dinv28496 Davidia involucrata HOM05D000059 ORTHO05D005093 8.9e-40 167.9 235 44.7
Nn1g01328 Nelumbo nucifera HOM05D007174 ORTHO05D009061 1.2e-39 167.5 222 45.0
VMungo0464G0116 Vigna mungo HOM05D007174 ORTHO05D009061 2.0e-39 166.8 222 45.0
RcHm_v2.0_Chr1g0376581 Rosa chinensis HOM05D007174 ORTHO05D009061 2.6e-39 166.4 210 45.7
THA.LOC104826810 Tarenaya hassleriana HOM05D007174 ORTHO05D009061 2.6e-39 166.4 209 46.4
Actinidia03101 Actinidia chinensis HOM05D007174 ORTHO05D009061 5.8e-39 165.2 171 52.6
MBI04_g40843_MAGBIO Magnolia biondii HOM05D007174 ORTHO05D009061 9.8e-39 164.5 189 46.0
ATR0757G135 Amborella trichopoda HOM05D007174 ORTHO05D009061 1.3e-38 164.1 189 46.6
Mapoly0145s0018 Marchantia polymorpha HOM05D007174 ORTHO05D009061 1.3e-38 164.1 179 49.7
BolC2t12246H Brassica oleracea HOM05D007174 ORTHO05D009061 1.7e-38 163.7 210 45.2
AT5G62140 Arabidopsis thaliana HOM05D007174 ORTHO05D009061 2.2e-38 163.3 203 45.8
BcaB07g29797 Brassica carinata HOM05D007174 ORTHO05D009061 2.2e-38 163.3 206 46.6
A02p42000 Brassica napus HOM05D007174 ORTHO05D009061 2.2e-38 163.3 210 44.8
BraA02t09135Z Brassica rapa HOM05D007174 ORTHO05D009061 2.2e-38 163.3 210 44.8
Sp2g25310 Schrenkiella parvula HOM05D007174 ORTHO05D009061 4.9e-38 162.2 203 44.3
TWI23G0481 Tripterygium wilfordii HOM05D007174 ORTHO05D009061 6.4e-38 161.8 208 46.2
BcaC03g18123 Brassica carinata HOM05D007174 ORTHO05D009061 8.3e-38 161.4 210 44.8
Carub.0008s2281 Capsella rubella HOM05D007174 ORTHO05D009061 8.3e-38 161.4 203 45.3
AagrBONN_evm.TU.Sc2ySwM_228.5753 Anthoceros agrestis HOM05D007174 ORTHO05D009061 2.4e-37 159.8 179 45.8
Atru.chr1.537 Acer truncatum HOM05D007174 ORTHO05D009061 3.2e-37 159.5 216 42.1
AL8G38920 Arabidopsis lyrata HOM05D007174 ORTHO05D009061 3.2e-37 159.5 203 44.3
Thhalv10004841m.g Eutrema salsugineum HOM05D007174 ORTHO05D009061 9.2e-37 157.9 186 47.3
SEGI_06842 Sequoiadendron giganteum HOM05D007174 ORTHO05D009061 3.5e-36 156.0 192 46.4
CSS0030220 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 4.6e-36 155.6 204 46.6
CARHR275910 Cardamine hirsuta HOM05D007174 ORTHO05D009061 3.0e-35 152.9 203 43.3
Cc02_g03460 Coffea canephora HOM05D007174 ORTHO05D009061 3.0e-35 152.9 220 44.1
Pp3c13_6960 Physcomitrium patens HOM05D007174 ORTHO05D009061 1.2e-33 147.5 180 45.6
SMO137G0111 Selaginella moellendorffii HOM05D007174 ORTHO05D009061 1.4e-32 144.1 202 42.1
CBR_g53539 Chara braunii HOM05D007174 ORTHO05D009061 1.8e-32 143.7 189 40.7
ECA232G4749 Erigeron canadensis HOM05D007174 ORTHO05D009061 1.7e-30 137.1 142 52.8
Gohir.D12G262000 Gossypium hirsutum HOM05D007174 ORTHO05D009061 2.2e-30 136.7 171 45.0
Pp3c4_22170 Physcomitrium patens HOM05D007174 ORTHO05D009061 6.4e-30 135.2 192 41.7
Oeu030133.1 Olea europaea HOM05D007174 ORTHO05D009061 4.1e-29 132.5 141 50.4
arahy.Tifrunner.gnm1.ann1.JY00AE Arachis hypogaea HOM05D007174 ORTHO05D009061 6.0e-28 128.6 161 46.6
Sc13g0008390 Simmondsia chinensis HOM05D007174 ORTHO05D009061 2.1e-25 120.2 183 39.3
AUR62021246 Chenopodium quinoa HOM05D007174 ORTHO05D009061 1.1e-21 107.8 100 53.0
HanXRQChr15g0482681 Helianthus annuus HOM05D007174 ORTHO05D009061 1.4e-21 107.5 137 48.2
EL10Ac3g05682 Beta vulgaris HOM05D007174 ORTHO05D009061 2.5e-18 96.7 203 34.5
Cre01.g019600 Chlamydomonas reinhardtii HOM05D007174 ORTHO05D009061 4.0e-16 89.4 217 30.9
arahy.Tifrunner.gnm1.ann1.U0QS20 Arachis hypogaea HOM05D007174 ORTHO05D009061 1.2e-15 87.8 171 35.7
Solyc03g026330.4 Solanum lycopersicum HOM05D007174 ORTHO05D009061 7.6e-15 85.1 91 48.4
Aa31LG11G1430 Aethionema arabicum HOM05D007174 ORTHO05D009061 3.8e-14 82.8 66 57.6
Sc13g0008380 Simmondsia chinensis HOM05D007174 ORTHO05D009061 3.8e-14 82.8 196 29.1
arahy.Tifrunner.gnm1.ann1.BIF85U Arachis hypogaea HOM05D007174 ORTHO05D009061 4.9e-14 82.4 77 48.1
CDE01G0613 Ceratophyllum demersum HOM05D007174 ORTHO05D009061 1.5e-07 60.8 72 45.8
Pp3c26_1960 Physcomitrium patens HOM05D007174 ORTHO05D009061 7.6e-07 58.5 73 43.8


User provided reference genes

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