Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_747.g21740 Utricularia gibba HOM05D006582 ORTHO05D008313 2.4e-162 575.5 292 100.0
SGA_v2.0_scaffold18G08434 Striga asiatica HOM05D006582 ORTHO05D008313 9.3e-135 483.8 295 83.1
Migut.F00182 Erythranthe guttata HOM05D006582 ORTHO05D008313 5.1e-133 478.0 298 80.5
SalBow4G1606 Salvia bowleyana HOM05D006582 ORTHO05D008313 1.5e-132 476.5 293 79.9
CSS0043436 Camellia sinensis var. sinensis HOM05D006582 ORTHO05D008313 1.8e-130 469.5 295 77.3
CSS0003388 Camellia sinensis var. sinensis HOM05D006582 ORTHO05D008313 5.3e-130 468.0 295 76.9
Actinidia34241 Actinidia chinensis HOM05D006582 ORTHO05D008313 6.9e-130 467.6 295 77.3
Dinv29249 Davidia involucrata HOM05D006582 ORTHO05D008313 1.1e-127 460.3 295 77.3
GSVIVG01038593001 Vitis vinifera HOM05D006582 ORTHO05D008313 5.5e-127 458.0 299 77.3
Rhsim03G0211600 Rhododendron simsii HOM05D006582 ORTHO05D008313 1.3e-125 453.4 295 73.9
Cc04_g16300 Coffea canephora HOM05D006582 ORTHO05D008313 1.1e-124 450.3 295 78.0
Peaxi162Scf00740g00331 Petunia axillaris HOM05D006582 ORTHO05D008313 1.5e-124 449.9 295 74.6
Cfa016201 Carpinus fangiana HOM05D006582 ORTHO05D008313 1.9e-124 449.5 303 74.9
Hma1.2p1_0415F.1_g148010 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 7.4e-124 447.6 295 72.9
CsaV3_5G000310 Cucumis sativus L. HOM05D006582 ORTHO05D008313 1.6e-123 446.4 305 73.8
Sopen03g022560 Solanum pennellii HOM05D006582 ORTHO05D008313 1.6e-123 446.4 295 73.9
MELO3C005901.2 Cucumis melo HOM05D006582 ORTHO05D008313 2.8e-123 445.7 305 74.1
PGR142G1628 Punica granatum HOM05D006582 ORTHO05D008313 4.8e-123 444.9 303 74.6
Lj3A900T44 Lonicera japonica HOM05D006582 ORTHO05D008313 1.1e-122 443.7 297 74.4
Lsat_1_v5_gn_2_135281 Lactuca sativa HOM05D006582 ORTHO05D008313 1.4e-122 443.4 300 73.7
PGSC0003DMG402018519 Solanum tuberosum HOM05D006582 ORTHO05D008313 1.8e-122 443.0 295 73.9
Sed0002968 Sechium edule HOM05D006582 ORTHO05D008313 2.4e-122 442.6 306 73.2
Solyc03g082820.3 Solanum lycopersicum HOM05D006582 ORTHO05D008313 6.9e-122 441.0 295 73.2
RcHm_v2.0_Chr1g0355871 Rosa chinensis HOM05D006582 ORTHO05D008313 1.2e-121 440.3 300 73.0
CiPaw.06G044200 Carya illinoinensis HOM05D006582 ORTHO05D008313 2.6e-121 439.1 302 72.8
Ah.07g205040 Amaranthus hybridus HOM05D006582 ORTHO05D008313 1.3e-120 436.8 271 78.6
MD07G1135900 Malus domestica HOM05D006582 ORTHO05D008313 1.7e-120 436.4 300 72.3
Manes.01G148600 Manihot esculenta HOM05D006582 ORTHO05D008313 1.7e-120 436.4 301 72.8
Prupe.2G171600 Prunus persica HOM05D006582 ORTHO05D008313 1.7e-120 436.4 301 72.4
FAN01G0099 Fragaria x ananassa HOM05D006582 ORTHO05D008313 2.2e-120 436.0 300 72.3
Thecc.03G203200 Theobroma cacao HOM05D006582 ORTHO05D008313 2.2e-120 436.0 312 70.2
CAN.G481.47 Capsicum annuum HOM05D006582 ORTHO05D008313 3.8e-120 435.3 297 72.7
FAN03G0584 Fragaria x ananassa HOM05D006582 ORTHO05D008313 1.4e-119 433.3 300 72.0
FAN06G3963 Fragaria x ananassa HOM05D006582 ORTHO05D008313 1.4e-119 433.3 300 71.7
SGA_v2.0_scaffold44G16825 Striga asiatica HOM05D006582 ORTHO05D008313 1.4e-119 433.3 292 72.3
FvH4_7g14460 Fragaria vesca HOM05D006582 ORTHO05D008313 2.5e-119 432.6 300 71.7
FAN06G2233 Fragaria x ananassa HOM05D006582 ORTHO05D008313 2.5e-119 432.6 300 71.7
HanXRQChr07g0206401 Helianthus annuus HOM05D006582 ORTHO05D008313 2.5e-119 432.6 291 73.5
Haze_00249 Corylus avellana HOM05D006582 ORTHO05D008313 5.5e-119 431.4 331 68.3
Haze_00255 Corylus avellana HOM05D006582 ORTHO05D008313 5.5e-119 431.4 331 68.3
EL10Ac3g05224 Beta vulgaris HOM05D006582 ORTHO05D008313 7.2e-119 431.0 271 76.8
AUR62006048 Chenopodium quinoa HOM05D006582 ORTHO05D008313 7.2e-119 431.0 269 77.3
AUR62035580 Chenopodium quinoa HOM05D006582 ORTHO05D008313 7.2e-119 431.0 286 74.1
arahy.Tifrunner.gnm1.ann1.AV4C6H Arachis hypogaea HOM05D006582 ORTHO05D008313 9.4e-119 430.6 305 72.8
arahy.Tifrunner.gnm1.ann1.D33ADG Arachis hypogaea HOM05D006582 ORTHO05D008313 9.4e-119 430.6 305 72.8
Phvul.011G018800 Phaseolus vulgaris HOM05D006582 ORTHO05D008313 1.6e-118 429.9 304 73.0
COL.COLO4_16812 Corchorus olitorius HOM05D006582 ORTHO05D008313 2.7e-118 429.1 312 70.2
TAR374G0762 Trochodendron aralioides HOM05D006582 ORTHO05D008313 2.7e-118 429.1 298 71.5
QL09p007748 Quercus lobata HOM05D006582 ORTHO05D008313 4.6e-118 428.3 308 71.4
Ciclev10021376m.g Citrus clementina HOM05D006582 ORTHO05D008313 2.3e-117 426.0 300 71.3
VMungo1127G0470 Vigna mungo HOM05D006582 ORTHO05D008313 2.3e-117 426.0 303 72.3
THA.LOC104811904 Tarenaya hassleriana HOM05D006582 ORTHO05D008313 3.9e-117 425.2 304 68.4
Duzib068G0295 Durio zibethinus HOM05D006582 ORTHO05D008313 5.1e-117 424.9 312 69.2
vmacro06405 Vaccinium macrocarpon HOM05D006582 ORTHO05D008313 5.1e-117 424.9 341 63.0
Sabra15G0024300 Salix brachista HOM05D006582 ORTHO05D008313 1.1e-116 423.7 309 68.9
TWI60G0746 Tripterygium wilfordii HOM05D006582 ORTHO05D008313 4.3e-116 421.8 314 69.4
Glyma.11G108800 Glycine max HOM05D006582 ORTHO05D008313 5.7e-116 421.4 310 71.0
Lj3g0025694 Lotus japonicus HOM05D006582 ORTHO05D008313 7.4e-116 421.0 298 72.8
Sc19g0000750 Simmondsia chinensis HOM05D006582 ORTHO05D008313 7.4e-116 421.0 271 74.9
CANSAT21G1996 Cannabis sativa HOM05D006582 ORTHO05D008313 4.8e-115 418.3 302 70.2
Aqoxy7G00041 Aquilegia oxysepala HOM05D006582 ORTHO05D008313 6.3e-115 417.9 296 70.3
Gohir.D08G113800 Gossypium hirsutum HOM05D006582 ORTHO05D008313 8.2e-115 417.5 312 66.3
Hund11634 Selenicereus undatus HOM05D006582 ORTHO05D008313 1.4e-114 416.8 271 73.8
Gorai.004G122700 Gossypium raimondii HOM05D006582 ORTHO05D008313 5.3e-114 414.8 272 74.3
Nn6g34389 Nelumbo nucifera HOM05D006582 ORTHO05D008313 5.3e-114 414.8 299 68.6
Aa31LG3G9690 Aethionema arabicum HOM05D006582 ORTHO05D008313 6.9e-114 414.5 306 67.3
DCAR_008960 Daucus carota HOM05D006582 ORTHO05D008313 9.1e-114 414.1 276 74.3
Glyma.12G016600 Glycine max HOM05D006582 ORTHO05D008313 7.7e-113 411.0 302 70.5
TPR.G19615 Trifolium pratense HOM05D006582 ORTHO05D008313 2.9e-112 409.1 305 67.9
Ca_18952_v3 Cicer arietinum L. HOM05D006582 ORTHO05D008313 5.0e-112 408.3 305 68.5
Medtr4g078140 Medicago truncatula HOM05D006582 ORTHO05D008313 8.5e-112 407.5 307 68.1
Psat7g170040 Pisum sativum HOM05D006582 ORTHO05D008313 8.5e-112 407.5 305 68.2
Thhalv10025816m.g Eutrema salsugineum HOM05D006582 ORTHO05D008313 1.9e-111 406.4 306 65.0
AT4G27750 Arabidopsis thaliana HOM05D006582 ORTHO05D008313 4.2e-111 405.2 306 64.7
BcaNung01623 Brassica carinata HOM05D006582 ORTHO05D008313 4.2e-111 405.2 306 65.4
Carub.0007s1306 Capsella rubella HOM05D006582 ORTHO05D008313 7.2e-111 404.4 306 64.7
BcaC09g50542 Brassica carinata HOM05D006582 ORTHO05D008313 9.4e-111 404.1 306 65.0
Sp7g25720 Schrenkiella parvula HOM05D006582 ORTHO05D008313 9.4e-111 404.1 306 64.7
CARHR235480 Cardamine hirsuta HOM05D006582 ORTHO05D008313 1.6e-110 403.3 306 64.7
A01p19210 Brassica napus HOM05D006582 ORTHO05D008313 2.1e-110 402.9 306 65.0
C01p24110 Brassica napus HOM05D006582 ORTHO05D008313 2.1e-110 402.9 306 65.0
BraA01t01863Z Brassica rapa HOM05D006582 ORTHO05D008313 3.6e-110 402.1 306 65.0
Lalb_Chr03g0024361 Lupinus albus HOM05D006582 ORTHO05D008313 3.6e-110 402.1 303 68.0
AL7G24900 Arabidopsis lyrata HOM05D006582 ORTHO05D008313 7.9e-110 401.0 307 64.5
PSO782G4269 Papaver somniferum HOM05D006582 ORTHO05D008313 7.4e-108 394.4 296 65.2
BolC1t02368H Brassica oleracea HOM05D006582 ORTHO05D008313 1.8e-106 389.8 335 59.7
Hund21029 Selenicereus undatus HOM05D006582 ORTHO05D008313 2.2e-104 382.9 271 68.3
ECA238G3804 Erigeron canadensis HOM05D006582 ORTHO05D008313 2.9e-104 382.5 324 62.0
MD01G1064000 Malus domestica HOM05D006582 ORTHO05D008313 2.5e-103 379.4 319 63.3
Nitab4.5_0002780g0150 Nicotiana tabacum HOM05D006582 ORTHO05D008313 3.2e-103 379.0 314 62.7
Nitab4.5_0007755g0010 Nicotiana tabacum HOM05D006582 ORTHO05D008313 5.7e-100 368.2 336 58.3
BcaNung01628 Brassica carinata HOM05D006582 ORTHO05D008313 2.4e-98 362.8 306 60.5
MBI04_g35986_MAGBIO Magnolia biondii HOM05D006582 ORTHO05D008313 4.1e-98 362.1 297 63.0
BcaNung01632 Brassica carinata HOM05D006582 ORTHO05D008313 8.8e-93 344.4 320 56.9
ATR0933G001 Amborella trichopoda HOM05D006582 ORTHO05D008313 3.4e-92 342.4 306 57.5
Os06g0129300 Oryza sativa ssp. japonica HOM05D006582 ORTHO05D008313 1.9e-87 326.6 272 61.0
Hma1.2p1_0415F.1_g148020 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 4.7e-86 322.0 220 70.5
Zm00001eb378450 Zea mays HOM05D006582 ORTHO05D008313 1.0e-85 320.9 286 57.7
Eucgr.K00407 Eucalyptus grandis HOM05D006582 ORTHO05D008313 1.1e-82 310.8 233 71.7
HPP92_007389 Vanilla planifolia HOM05D006582 ORTHO05D008313 2.5e-79 299.7 313 52.1
MD01G1064500 Malus domestica HOM05D006582 ORTHO05D008313 8.0e-78 294.7 201 73.1
Gohir.A08G102500 Gossypium hirsutum HOM05D006582 ORTHO05D008313 1.4e-77 293.9 237 62.0
CDE04G1908 Ceratophyllum demersum HOM05D006582 ORTHO05D008313 5.6e-71 271.9 293 49.8
MD01G1063600 Malus domestica HOM05D006582 ORTHO05D008313 5.6e-71 271.9 254 58.7
Potri.015G029300 Populus trichocarpa HOM05D006582 ORTHO05D008313 2.2e-67 260.0 209 64.1
Os10g0520900 Oryza sativa ssp. japonica HOM05D006582 ORTHO05D008313 2.8e-62 243.0 263 47.1
Zm00001eb021230 Zea mays HOM05D006582 ORTHO05D008313 5.1e-56 222.2 263 44.5
Cpa.g.sc3.116 Carica papaya HOM05D006582 ORTHO05D008313 2.2e-51 206.8 192 58.9
PGSC0003DMG401018519 Solanum tuberosum HOM05D006582 ORTHO05D008313 4.1e-50 202.6 155 68.4
Mapoly0081s0017 Marchantia polymorpha HOM05D006582 ORTHO05D008313 5.4e-50 202.2 300 39.7
SMO356G0114 Selaginella moellendorffii HOM05D001613 ORTHO05D001556 2.1e-46 190.3 271 38.0
Pp3c14_24810 Physcomitrium patens HOM05D006582 ORTHO05D008313 2.1e-41 173.7 213 44.1
AagrBONN_evm.TU.Sc2ySwM_228.4673 Anthoceros agrestis HOM05D006582 ORTHO05D008313 9.6e-39 164.9 220 41.4
Hma1.2p1_0512F.1_g169380 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 9.9e-36 154.8 182 50.5
CiPaw.05G199600 Carya illinoinensis HOM05D006582 ORTHO05D008313 1.1e-34 151.4 115 67.0
CBR_g57838 Chara braunii HOM05D006582 ORTHO05D008313 2.4e-26 123.6 209 35.9
Hma1.2p1_0415F.1_g148000 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 1.6e-25 120.9 88 68.2
SHI19113 Sapria himalayana HOM05D006582 ORTHO05D008313 3.8e-19 99.8 74 62.2
SHI19111 Sapria himalayana HOM05D006582 ORTHO05D008313 2.5e-18 97.1 93 53.8
Rhsim03G0115100 Rhododendron simsii HOM05D006582 ORTHO05D023108 2.1e-17 94.0 135 44.4
SEGI_26283 Sequoiadendron giganteum HOM05D006582 ORTHO05D008313 2.3e-16 90.5 79 57.0
MD07G1135700 Malus domestica HOM05D006582 ORTHO05D008313 3.6e-09 66.6 79 51.9
SEGI_35321 Sequoiadendron giganteum HOM05D006582 ORTHO05D008313 4.8e-06 56.2 57 40.4


User provided reference genes

Program Settings