Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_747.g21715 Utricularia gibba HOM05D006228 ORTHO05D007847 1.8e-240 835.5 422 100.0
Migut.F00709 Erythranthe guttata HOM05D006228 ORTHO05D007847 2.0e-138 496.5 427 59.0
SGA_v2.0_scaffold2G01060 Striga asiatica HOM05D006228 ORTHO05D007847 1.0e-129 467.6 430 57.2
Oeu006660.1 Olea europaea HOM05D006228 ORTHO05D007847 2.1e-119 433.3 433 54.3
SalBow5G2373 Salvia bowleyana HOM05D006228 ORTHO05D007847 4.1e-115 419.1 403 56.3
Dinv34431 Davidia involucrata HOM05D006228 ORTHO05D007847 5.7e-109 398.7 428 51.2
Sopen06g004350 Solanum pennellii HOM05D006228 ORTHO05D007847 9.7e-109 397.9 421 51.1
PGSC0003DMG400007303 Solanum tuberosum HOM05D006228 ORTHO05D007847 9.7e-109 397.9 418 51.7
Solyc06g009690.3 Solanum lycopersicum HOM05D006228 ORTHO05D007847 3.7e-108 396.0 418 51.0
Actinidia13913 Actinidia chinensis HOM05D006228 ORTHO05D007847 8.2e-108 394.8 443 48.8
CAN.G1280.21 Capsicum annuum HOM05D006228 ORTHO05D007847 4.5e-106 389.0 420 49.8
Cc02_g06990 Coffea canephora HOM05D006228 ORTHO05D007847 1.0e-105 387.9 425 50.6
TAR633G1830 Trochodendron aralioides HOM05D006228 ORTHO05D007847 5.0e-105 385.6 440 48.0
Haze_17175 Corylus avellana HOM05D006228 ORTHO05D007847 1.5e-104 384.0 433 47.8
CSS0000174 Camellia sinensis var. sinensis HOM05D006228 ORTHO05D007847 1.9e-104 383.6 437 49.7
CSS0026214 Camellia sinensis var. sinensis HOM05D006228 ORTHO05D007847 3.2e-104 382.9 437 49.7
Prupe.2G245100 Prunus persica HOM05D006228 ORTHO05D007847 4.2e-104 382.5 439 48.1
Psat5g127520 Pisum sativum HOM05D006228 ORTHO05D007847 9.4e-104 381.3 437 48.1
Medtr3g070010 Medicago truncatula HOM05D006228 ORTHO05D007847 2.7e-103 379.8 439 48.7
Nitab4.5_0012179g0020 Nicotiana tabacum HOM05D006228 ORTHO05D007847 3.6e-103 379.4 443 48.5
RcHm_v2.0_Chr1g0369221 Rosa chinensis HOM05D006228 ORTHO05D007847 3.6e-103 379.4 437 47.8
Ca_17139_v3 Cicer arietinum L. HOM05D006228 ORTHO05D007847 1.8e-102 377.1 436 47.5
DCAR_011778 Daucus carota HOM05D006228 ORTHO05D007847 1.8e-102 377.1 404 50.2
Manes.10G018500 Manihot esculenta HOM05D006228 ORTHO05D007847 1.8e-102 377.1 439 48.7
TWI09G0225 Tripterygium wilfordii HOM05D006228 ORTHO05D007847 1.8e-102 377.1 435 49.0
TPR.G29810 Trifolium pratense HOM05D006228 ORTHO05D007847 4.0e-102 375.9 430 48.1
AUR62022833 Chenopodium quinoa HOM05D006228 ORTHO05D007847 6.7e-102 375.2 419 48.9
Lj1A949T58 Lonicera japonica HOM05D006228 ORTHO05D007847 6.7e-102 375.2 453 48.3
Rhsim09G0171700 Rhododendron simsii HOM05D006228 ORTHO05D007847 9.7e-101 371.3 448 46.7
CiPaw.01G295100 Carya illinoinensis HOM05D006228 ORTHO05D007847 1.7e-100 370.5 432 46.3
MD07G1212900 Malus domestica HOM05D006228 ORTHO05D007847 8.2e-100 368.2 433 47.8
Duzib106G2031 Durio zibethinus HOM05D006228 ORTHO05D007847 1.8e-99 367.1 407 48.6
FAN10G3493 Fragaria x ananassa HOM05D006228 ORTHO05D007847 2.4e-99 366.7 411 48.2
GSVIVG01016380001 Vitis vinifera HOM05D006228 ORTHO05D007847 3.1e-99 366.3 432 47.9
Lalb_Chr18g0052781 Lupinus albus HOM05D006228 ORTHO05D007847 5.3e-99 365.5 441 46.5
Peaxi162Scf00401g00030 Petunia axillaris HOM05D006228 ORTHO05D007847 4.5e-98 362.5 416 48.8
Cfa005508 Carpinus fangiana HOM05D006228 ORTHO05D007847 5.9e-98 362.1 427 46.6
PSO384G3635 Papaver somniferum HOM05D006228 ORTHO05D007847 1.0e-97 361.3 427 47.8
Lj6g0016911 Lotus japonicus HOM05D006228 ORTHO05D007847 1.3e-97 360.9 437 47.4
Potri.008G063500 Populus trichocarpa HOM05D006228 ORTHO05D007847 1.3e-97 360.9 451 45.7
Nn2g13585 Nelumbo nucifera HOM05D006228 ORTHO05D007847 3.8e-97 359.4 445 45.6
EL10Ac2g04780 Beta vulgaris HOM05D006228 ORTHO05D007847 5.0e-97 359.0 429 45.0
Nitab4.5_0000278g0180 Nicotiana tabacum HOM05D006228 ORTHO05D007847 5.0e-97 359.0 416 49.0
THA.LOC104810050 Tarenaya hassleriana HOM05D006228 ORTHO05D007847 5.0e-97 359.0 443 44.2
AUR62012200 Chenopodium quinoa HOM05D006228 ORTHO05D007847 6.5e-97 358.6 420 46.9
Aqoxy1G00736 Aquilegia oxysepala HOM05D006228 ORTHO05D007847 2.5e-96 356.7 427 46.8
Gorai.010G199300 Gossypium raimondii HOM05D006228 ORTHO05D007847 4.2e-96 355.9 427 46.4
arahy.Tifrunner.gnm1.ann1.H1F5T1 Arachis hypogaea HOM05D006228 ORTHO05D007847 5.5e-96 355.5 455 45.7
VMungo1383G2528 Vigna mungo HOM05D006228 ORTHO05D007847 5.5e-96 355.5 434 45.2
FAN03G1418 Fragaria x ananassa HOM05D006228 ORTHO05D007847 7.2e-96 355.1 429 45.7
Gohir.D06G170400 Gossypium hirsutum HOM05D006228 ORTHO05D007847 1.6e-95 354.0 427 46.6
Glyma.18G031000 Glycine max HOM05D006228 ORTHO05D007847 3.6e-95 352.8 440 45.5
Thecc.10G027500 Theobroma cacao HOM05D006228 ORTHO05D007847 3.6e-95 352.8 427 45.2
Aqoxy3G00589 Aquilegia oxysepala HOM05D006228 ORTHO05D007847 8.0e-95 351.7 428 46.5
Gohir.A06G164900 Gossypium hirsutum HOM05D006228 ORTHO05D007847 1.4e-94 350.9 427 45.7
COL.COLO4_25614 Corchorus olitorius HOM05D006228 ORTHO05D007847 2.3e-94 350.1 431 46.9
MBI14_g08147_MAGBIO Magnolia biondii HOM05D006228 ORTHO05D007847 2.3e-94 350.1 429 45.0
FAN01G0169 Fragaria x ananassa HOM05D006228 ORTHO05D007847 2.0e-93 347.1 440 44.5
FAN06G4757 Fragaria x ananassa HOM05D006228 ORTHO05D007847 2.6e-93 346.7 438 44.5
Thhalv10016686m.g Eutrema salsugineum HOM05D006228 ORTHO05D007847 5.7e-93 345.5 433 45.0
Hund13827 Selenicereus undatus HOM05D006228 ORTHO05D007847 9.8e-93 344.7 479 41.1
AL4G37490 Arabidopsis lyrata HOM05D006228 ORTHO05D007847 1.3e-92 344.4 425 45.4
FvH4_7g23870 Fragaria vesca HOM05D006228 ORTHO05D007847 1.7e-92 344.0 440 44.1
BolC3t15036H Brassica oleracea HOM05D006228 ORTHO05D007847 3.7e-92 342.8 425 44.0
BcaC01g05454 Brassica carinata HOM05D006228 ORTHO05D007847 8.3e-92 341.7 432 44.2
AT2G39910 Arabidopsis thaliana HOM05D006228 ORTHO05D007847 1.1e-91 341.3 425 44.2
Phvul.001G239600 Phaseolus vulgaris HOM05D006228 ORTHO05D007847 1.1e-91 341.3 434 44.5
ClCG11G010510 Citrullus lanatus HOM05D006228 ORTHO05D007847 1.4e-91 340.9 435 45.1
A03p22360 Brassica napus HOM05D006228 ORTHO05D007847 2.4e-91 340.1 427 43.3
C03p26500 Brassica napus HOM05D006228 ORTHO05D007847 2.4e-91 340.1 431 43.2
Sp4g22220 Schrenkiella parvula HOM05D006228 ORTHO05D007847 2.4e-91 340.1 431 43.2
HanXRQChr09g0246891 Helianthus annuus HOM05D006228 ORTHO05D007847 4.1e-91 339.3 427 44.3
Aa31LG5G19710 Aethionema arabicum HOM05D006228 ORTHO05D007847 9.1e-91 338.2 427 44.5
BraA03t11466Z Brassica rapa HOM05D006228 ORTHO05D007847 1.6e-90 337.4 427 43.1
ECA232G3403 Erigeron canadensis HOM05D006228 ORTHO05D007847 6.6e-89 332.0 428 44.4
CsaV3_5G008840 Cucumis sativus L. HOM05D006228 ORTHO05D007847 8.6e-89 331.6 435 45.1
CARHR134830 Cardamine hirsuta HOM05D006228 ORTHO05D007847 1.2e-87 327.8 424 43.6
Sc11g0007370 Simmondsia chinensis HOM05D006228 ORTHO05D007847 2.1e-87 327.0 371 46.9
BcaB01g03579 Brassica carinata HOM05D006228 ORTHO05D007847 3.6e-87 326.2 434 42.4
Sed0002982 Sechium edule HOM05D006228 ORTHO05D007847 3.6e-87 326.2 435 44.4
Hma1.2p1_0026F.1_g016930 Hydrangea macrophylla HOM05D006228 ORTHO05D007847 6.1e-87 325.5 304 54.9
Ah.16g103060 Amaranthus hybridus HOM05D006228 ORTHO05D007847 8.0e-87 325.1 431 42.5
Carub.0004s2204 Capsella rubella HOM05D006228 ORTHO05D007847 4.0e-86 322.8 428 43.9
SHI03521 Sapria himalayana HOM05D006228 ORTHO05D007847 2.2e-84 317.0 420 42.6
Sabra08G0046800 Salix brachista HOM05D006228 ORTHO05D007847 1.4e-83 314.3 436 43.8
Lsat_1_v5_gn_9_63220 Lactuca sativa HOM05D006228 ORTHO05D007847 1.8e-83 313.9 417 45.6
vmacro10067 Vaccinium macrocarpon HOM05D006228 ORTHO05D007847 4.5e-82 309.3 476 40.5
ATR0580G418 Amborella trichopoda HOM05D006228 ORTHO05D007847 7.8e-82 308.5 439 41.9
MELO3C025144.2 Cucumis melo HOM05D006228 ORTHO05D007847 1.6e-79 300.8 445 41.8
PGR044G0451 Punica granatum HOM05D006228 ORTHO05D007847 1.6e-79 300.8 437 43.5
Atru.chr12.264 Acer truncatum HOM05D006228 ORTHO05D007847 5.2e-78 295.8 376 44.9
PSO585G0034 Papaver somniferum HOM05D006228 ORTHO05D007847 1.2e-77 294.7 292 52.1
Ciclev10031701m.g Citrus clementina HOM05D006228 ORTHO05D007847 2.9e-76 290.0 437 40.3
Zm00001eb226270 Zea mays HOM05D006228 ORTHO05D007847 1.1e-75 288.1 424 40.3
arahy.Tifrunner.gnm1.ann1.PGVU2S Arachis hypogaea HOM05D006228 ORTHO05D007847 2.0e-74 283.9 360 46.1
Os06g0694100 Oryza sativa ssp. japonica HOM05D006228 ORTHO05D007847 2.3e-73 280.4 438 38.6
Eucgr.J00246 Eucalyptus grandis HOM05D006228 ORTHO05D007847 8.3e-68 261.9 448 40.0
SEGI_03712 Sequoiadendron giganteum HOM05D006228 ORTHO05D007847 1.2e-63 248.1 425 34.4
CDE05G2573 Ceratophyllum demersum HOM05D006228 ORTHO05D007847 6.0e-58 229.2 347 40.3
FAN06G0021 Fragaria x ananassa HOM05D006228 ORTHO05D007847 2.6e-53 213.8 322 40.7
MSTRG.8975 Avicennia marina HOM05D006228 ORTHO05D007847 5.8e-45 186.0 190 53.7
RcHm_v2.0_Chr2g0110551 Rosa chinensis HOM05D006228 ORTHO05D007847 7.1e-43 179.1 146 56.8
Actinidia00930 Actinidia chinensis HOM05D006228 ORTHO05D007847 7.8e-42 175.6 150 54.7
QL08p062537 Quercus lobata HOM05D006228 ORTHO05D007847 1.7e-41 174.5 159 49.7
BcaB06g29116 Brassica carinata HOM05D006228 ORTHO05D007847 6.6e-41 172.6 206 43.7
Sed0008304 Sechium edule HOM05D006228 ORTHO05D007847 1.5e-40 171.4 277 40.8
Cpa.g.sc19.228 Carica papaya HOM05D006228 ORTHO05D007847 7.6e-37 159.1 405 31.1
HPP92_018569 Vanilla planifolia HOM05D006228 ORTHO05D007847 6.4e-36 156.0 137 50.4
Mapoly0014s0032 Marchantia polymorpha HOM05D006228 ORTHO05D007847 1.4e-35 154.8 347 29.7
RcHm_v2.0_Chr1g0339731 Rosa chinensis HOM05D006228 ORTHO05D007847 1.3e-33 148.3 146 52.7
Pp3c11_8050 Physcomitrium patens HOM05D006228 ORTHO05D007847 1.8e-33 147.9 300 31.0
HPP92_018568 Vanilla planifolia HOM05D006228 ORTHO05D007847 3.9e-33 146.7 301 36.5
AagrBONN_evm.TU.Sc2ySwM_344.5121 Anthoceros agrestis HOM05D006228 ORTHO05D007847 8.7e-33 145.6 391 27.6
BcaC02g07378 Brassica carinata HOM05D006228 ORTHO05D007847 1.6e-31 141.4 257 36.2
BolC4t28269H Brassica oleracea HOM05D006228 ORTHO05D007847 1.5e-29 134.8 159 42.8
Actinidia25353 Actinidia chinensis HOM05D006228 ORTHO05D007847 3.4e-29 133.7 159 44.0
SMO273G0042 Selaginella moellendorffii HOM05D006228 ORTHO05D007847 5.6e-24 116.3 275 28.7
C04p67680 Brassica napus HOM05D006228 ORTHO05D007847 1.4e-11 75.1 106 37.7
SMO147G0063 Selaginella moellendorffii HOM05D006228 ORTHO05D007847 1.3e-07 62.0 209 25.4


User provided reference genes

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