Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_747.g21700 Utricularia gibba HOM05D006670 ORTHO05D008715 1.5e-223 779.2 398 100.0
MSTRG.4202 Avicennia marina HOM05D006670 ORTHO05D008715 2.9e-94 349.7 396 50.5
Migut.G00614 Erythranthe guttata HOM05D006670 ORTHO05D008715 1.1e-90 337.8 396 49.5
vmacro00519 Vaccinium macrocarpon HOM05D006670 ORTHO05D008715 1.2e-87 327.8 389 50.1
Duzib212G0230 Durio zibethinus HOM05D006670 ORTHO05D008715 2.6e-87 326.6 396 47.5
Peaxi162Scf00536g00711 Petunia axillaris HOM05D006670 ORTHO05D008715 4.4e-87 325.9 391 48.3
Sopen05g031980 Solanum pennellii HOM05D006670 ORTHO05D008715 7.1e-85 318.5 391 47.8
Thecc.04G214700 Theobroma cacao HOM05D006670 ORTHO05D008715 1.2e-84 317.8 389 47.8
SGA_v2.0_scaffold57G20164 Striga asiatica HOM05D006670 ORTHO05D008715 7.8e-84 315.1 391 46.5
COL.COLO4_05724 Corchorus olitorius HOM05D006670 ORTHO05D008715 1.7e-83 313.9 389 46.5
Dinv27152 Davidia involucrata HOM05D006670 ORTHO05D008715 1.7e-83 313.9 392 46.4
HanXRQChr01g0022661 Helianthus annuus HOM05D006670 ORTHO05D008715 1.9e-82 310.5 392 46.9
DCAR_024309 Daucus carota HOM05D006670 ORTHO05D008715 2.5e-82 310.1 391 46.3
Gorai.011G163000 Gossypium raimondii HOM05D006670 ORTHO05D008715 4.3e-82 309.3 391 46.0
Lsat_1_v5_gn_0_4721 Lactuca sativa HOM05D006670 ORTHO05D008715 5.6e-82 308.9 393 45.5
CSS0047689 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 9.6e-82 308.1 390 46.4
Ciclev10005609m.g Citrus clementina HOM05D006670 ORTHO05D008715 9.6e-82 308.1 390 45.9
Gohir.D10G145900 Gossypium hirsutum HOM05D006670 ORTHO05D008715 1.2e-81 307.8 391 45.8
Cfa014868 Carpinus fangiana HOM05D006670 ORTHO05D008715 2.1e-81 307.0 390 46.9
CiPaw.01G205600 Carya illinoinensis HOM05D006670 ORTHO05D008715 6.2e-81 305.4 391 45.8
Manes.15G049800 Manihot esculenta HOM05D006670 ORTHO05D008715 8.1e-81 305.1 391 45.0
Haze_11539 Corylus avellana HOM05D006670 ORTHO05D008715 1.4e-80 304.3 390 46.2
Gohir.A10G120500 Gossypium hirsutum HOM05D006670 ORTHO05D008715 1.8e-80 303.9 391 45.3
MELO3C006346.2 Cucumis melo HOM05D006670 ORTHO05D008715 5.2e-80 302.4 390 45.1
ClCG05G003670 Citrullus lanatus HOM05D006670 ORTHO05D008715 8.9e-80 301.6 391 44.8
CsaV3_3G011380 Cucumis sativus L. HOM05D006670 ORTHO05D008715 1.5e-79 300.8 391 44.8
ECA248G0542 Erigeron canadensis HOM05D006670 ORTHO05D008715 1.5e-79 300.8 389 44.7
Rhsim09G0046600 Rhododendron simsii HOM05D006670 ORTHO05D008715 2.0e-79 300.4 393 45.0
CSS0048127 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 2.6e-79 300.1 390 45.4
MD13G1229700 Malus domestica HOM05D006670 ORTHO05D008715 7.6e-79 298.5 391 45.3
A07p08240 Brassica napus HOM05D006670 ORTHO05D008715 9.9e-79 298.1 388 45.1
AUR62035928 Chenopodium quinoa HOM05D006670 ORTHO05D008715 9.9e-79 298.1 390 45.6
Cpa.g.sc59.72 Carica papaya HOM05D006670 ORTHO05D008715 1.7e-78 297.4 390 44.9
Potri.003G174400 Populus trichocarpa HOM05D006670 ORTHO05D008715 1.7e-78 297.4 391 44.8
CANSAT78G1187 Cannabis sativa HOM05D006670 ORTHO05D008715 2.9e-78 296.6 392 44.9
Manes.03G154700 Manihot esculenta HOM05D006670 ORTHO05D008715 2.9e-78 296.6 394 44.7
Sabra03G0127900 Salix brachista HOM05D006670 ORTHO05D008715 2.9e-78 296.6 391 45.0
Prupe.1G056900 Prunus persica HOM05D006670 ORTHO05D008715 4.9e-78 295.8 391 44.2
QL06p022765 Quercus lobata HOM05D006670 ORTHO05D008715 8.4e-78 295.0 389 44.2
PGR083G1840 Punica granatum HOM05D006670 ORTHO05D008715 1.1e-77 294.7 388 44.8
Rhsim09G0047600 Rhododendron simsii HOM05D006670 ORTHO05D008715 1.1e-77 294.7 389 44.2
Sed0004390 Sechium edule HOM05D006670 ORTHO05D008715 1.4e-77 294.3 393 44.8
BcaB06g26594 Brassica carinata HOM05D006670 ORTHO05D008715 1.9e-77 293.9 388 44.3
PSO017G1158 Papaver somniferum HOM05D006670 ORTHO05D008715 3.2e-77 293.1 388 44.1
RcHm_v2.0_Chr4g0396631 Rosa chinensis HOM05D006670 ORTHO05D008715 3.2e-77 293.1 391 43.5
BolC7t41764H Brassica oleracea HOM05D006670 ORTHO05D008715 4.2e-77 292.7 388 43.3
TAR636G1307 Trochodendron aralioides HOM05D006670 ORTHO05D008715 7.1e-77 292.0 396 44.9
Hund24851 Selenicereus undatus HOM05D006670 ORTHO05D008715 9.3e-77 291.6 388 43.6
BcaC06g35628 Brassica carinata HOM05D006670 ORTHO05D008715 2.1e-76 290.4 388 43.3
C07p12780 Brassica napus HOM05D006670 ORTHO05D008715 2.1e-76 290.4 388 43.3
PSO063G6527 Papaver somniferum HOM05D006670 ORTHO05D008715 2.1e-76 290.4 388 43.0
BraA07t28607Z Brassica rapa HOM05D006670 ORTHO05D008715 2.7e-76 290.0 388 43.6
FAN22G1637 Fragaria x ananassa HOM05D006670 ORTHO05D008715 2.7e-76 290.0 391 43.5
FAN07G0632 Fragaria x ananassa HOM05D006670 ORTHO05D008715 3.5e-76 289.7 391 43.7
Sc13g0002920 Simmondsia chinensis HOM05D006670 ORTHO05D008715 3.5e-76 289.7 389 43.4
FvH4_4g05510 Fragaria vesca HOM05D006670 ORTHO05D008715 6.0e-76 288.9 391 43.7
AUR62035321 Chenopodium quinoa HOM05D006670 ORTHO05D008715 7.8e-76 288.5 390 44.1
VMungo0720G2028 Vigna mungo HOM05D006670 ORTHO05D008715 1.0e-75 288.1 390 43.6
Aqoxy2G03824 Aquilegia oxysepala HOM05D006670 ORTHO05D008715 1.7e-75 287.3 390 43.8
CARHR100200 Cardamine hirsuta HOM05D006670 ORTHO05D008715 1.7e-75 287.3 388 43.8
FAN12G2738 Fragaria x ananassa HOM05D006670 ORTHO05D008715 1.7e-75 287.3 391 43.5
SHI00002 Sapria himalayana HOM05D006670 ORTHO05D008715 3.9e-75 286.2 389 43.4
Glyma.10G127400 Glycine max HOM05D006670 ORTHO05D008715 6.6e-75 285.4 391 44.8
Thhalv10002635m.g Eutrema salsugineum HOM05D006670 ORTHO05D008715 1.1e-74 284.6 388 42.8
Phvul.007G238000 Phaseolus vulgaris HOM05D006670 ORTHO05D008715 1.1e-74 284.6 390 44.6
AL3G39350 Arabidopsis lyrata HOM05D006670 ORTHO05D008715 1.9e-74 283.9 388 43.3
AT3G24030 Arabidopsis thaliana HOM05D006670 ORTHO05D008715 2.5e-74 283.5 388 43.0
MBI10_g16834_MAGBIO Magnolia biondii HOM05D006670 ORTHO05D008715 3.3e-74 283.1 388 44.6
Sp3g21930 Schrenkiella parvula HOM05D006670 ORTHO05D008715 3.3e-74 283.1 388 43.0
Nitab4.5_0001769g0060 Nicotiana tabacum HOM05D006670 ORTHO05D008715 4.3e-74 282.7 391 44.2
arahy.Tifrunner.gnm1.ann1.CI907D Arachis hypogaea HOM05D006670 ORTHO05D008715 5.6e-74 282.3 390 44.1
Carub.0003s2449 Capsella rubella HOM05D006670 ORTHO05D008715 9.6e-74 281.6 388 43.3
Nitab4.5_0012036g0010 Nicotiana tabacum HOM05D006670 ORTHO05D008715 1.3e-73 281.2 391 44.0
PGSC0003DMG400027217 Solanum tuberosum HOM05D006670 ORTHO05D008715 2.1e-73 280.4 364 46.2
arahy.Tifrunner.gnm1.ann1.M1QCRY Arachis hypogaea HOM05D006670 ORTHO05D008715 2.8e-73 280.0 390 43.8
THA.LOC104808732 Tarenaya hassleriana HOM05D006670 ORTHO05D008715 3.6e-73 279.6 383 43.3
Ah.04g153360 Amaranthus hybridus HOM05D006670 ORTHO05D008715 6.2e-73 278.9 387 44.7
Lju414A3G25 Lonicera japonica HOM05D006670 ORTHO05D008715 1.4e-72 277.7 363 46.6
Atru.chr4.1814 Acer truncatum HOM05D006670 ORTHO05D008715 3.1e-72 276.6 395 43.8
Oeu022324.1 Olea europaea HOM05D006670 ORTHO05D008715 5.3e-72 275.8 364 45.6
ATR0787G198 Amborella trichopoda HOM05D006670 ORTHO05D008715 9.0e-72 275.0 391 43.2
Actinidia25088 Actinidia chinensis HOM05D006670 ORTHO05D008715 1.2e-71 274.6 365 45.2
Lj6g0025132 Lotus japonicus HOM05D006670 ORTHO05D008715 4.4e-71 272.7 390 42.3
Lalb_Chr01g0011161 Lupinus albus HOM05D006670 ORTHO05D008715 9.9e-71 271.6 390 42.6
Eucgr.H02870 Eucalyptus grandis HOM05D006670 ORTHO05D008715 4.9e-70 269.2 391 43.5
Psat6g047400 Pisum sativum HOM05D006670 ORTHO05D008715 6.4e-70 268.9 390 41.5
Cc03_g07080 Coffea canephora HOM05D006670 ORTHO05D008715 3.2e-69 266.5 348 45.7
Zm00001eb341310 Zea mays HOM05D006670 ORTHO05D008715 5.4e-69 265.8 388 42.5
Ca_11808_v3 Cicer arietinum L. HOM05D006670 ORTHO05D008715 7.1e-69 265.4 391 42.7
TPR.G11296 Trifolium pratense HOM05D006670 ORTHO05D008715 9.3e-69 265.0 391 41.4
SEGI_39672 Sequoiadendron giganteum HOM05D006670 ORTHO05D008715 1.6e-68 264.2 388 41.0
Nn3g19866 Nelumbo nucifera HOM05D006670 ORTHO05D008715 1.7e-67 260.8 356 44.4
Mapoly0087s0052 Marchantia polymorpha HOM05D006670 ORTHO05D008715 2.5e-66 256.9 394 39.8
Medtr1g046790 Medicago truncatula HOM05D006670 ORTHO05D008715 5.6e-66 255.8 390 40.0
Medtr1g046510 Medicago truncatula HOM05D006670 ORTHO05D008715 7.3e-66 255.4 390 40.0
Pp3c9_10780 Physcomitrium patens HOM05D006670 ORTHO05D008715 7.3e-66 255.4 391 39.1
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 1.7e-62 244.2 386 39.1
CDE01G0405 Ceratophyllum demersum HOM05D007853 ORTHO05D009873 4.9e-62 242.7 356 40.7
SMO137G0262 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 1.1e-61 241.5 385 40.8
GSVIVG01029032001 Vitis vinifera HOM05D006670 ORTHO05D008715 1.4e-61 241.1 347 42.1
RhsimUnG0181700 Rhododendron simsii HOM05D006670 ORTHO05D008715 1.2e-52 211.5 393 36.1
SMO134G0250 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 2.1e-52 210.7 396 36.1
Cre06.g255350 Chlamydomonas reinhardtii HOM05D006670 ORTHO05D008715 3.3e-50 203.4 388 36.9
CAN.G305.17 Capsicum annuum HOM05D006670 ORTHO05D008715 1.1e-48 198.4 135 68.9
EL10Ac3g06772 Beta vulgaris HOM05D006670 ORTHO05D008715 3.4e-47 193.4 351 37.6
Lju414A3G24 Lonicera japonica HOM05D006670 ORTHO05D008715 5.7e-42 176.0 128 70.3
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.6e-41 174.5 138 62.3
CAN.G305.16 Capsicum annuum HOM05D006670 ORTHO05D008715 3.1e-40 170.2 131 67.9
Potri.001G053900 Populus trichocarpa HOM05D006670 ORTHO05D008715 1.9e-37 161.0 121 66.1
Psat7g020640 Pisum sativum HOM05D006670 ORTHO05D008715 3.6e-36 156.8 306 35.0
Os01g0363600 Oryza sativa ssp. japonica HOM05D006670 ORTHO05D008715 7.9e-36 155.6 128 60.9
Dinv44414 Davidia involucrata HOM05D006670 ORTHO05D008715 9.7e-34 148.7 272 37.1
Psat4g139560 Pisum sativum HOM05D006670 ORTHO05D000720 6.9e-32 142.5 343 30.9
Migut.G00612 Erythranthe guttata HOM05D006670 ORTHO05D008715 1.9e-29 134.4 131 60.3
Lsat_1_v5_gn_5_180420 Lactuca sativa HOM05D006670 ORTHO05D008715 3.6e-28 130.2 118 56.8
Psat0s5229g0080 Pisum sativum HOM05D006670 ORTHO05D006513 8.8e-27 125.6 338 29.3
PGSC0003DMG402027165 Solanum tuberosum HOM05D006670 ORTHO05D008715 1.7e-22 111.3 81 71.6
FAN17G2931 Fragaria x ananassa HOM05D006670 ORTHO05D008715 1.4e-19 101.7 80 65.0
Sabra01G0038200 Salix brachista HOM05D006670 ORTHO05D349611 1.4e-16 91.7 67 68.7
Psat4g139640 Pisum sativum HOM05D006670 ORTHO05D002176 1.8e-16 91.3 259 28.6
Cfa024720 Carpinus fangiana HOM05D005536 ORTHO05D006999 4.1e-08 63.5 127 33.1
Psat5g196680 Pisum sativum HOM05D006670 ORTHO05D008715 5.9e-07 59.7 46 60.9
Cpa.g.sc59.70 Carica papaya HOM05D006670 ORTHO05D119377 8.5e-06 55.8 89 34.8


User provided reference genes

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