Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_747.g21686 Utricularia gibba HOM05D000021 ORTHO05D043833 3.8e-45 184.5 95 100.0
Cc09_g05550 Coffea canephora HOM05D000021 ORTHO05D000010 5.7e-09 64.3 75 46.7
Duzib268G1172 Durio zibethinus HOM05D000021 ORTHO05D000010 1.4e-07 59.7 96 39.6
Thecc.07G111600 Theobroma cacao HOM05D000021 ORTHO05D000010 1.4e-07 59.7 80 42.5
Ciclev10017714m.g Citrus clementina HOM05D000021 ORTHO05D000010 1.8e-07 59.3 71 46.5
Duzib213G0457 Durio zibethinus HOM05D000021 ORTHO05D000010 1.8e-07 59.3 71 49.3
Duzib213G0707 Durio zibethinus HOM05D000021 ORTHO05D000010 1.8e-07 59.3 71 49.3
Thecc.07G112300 Theobroma cacao HOM05D000021 ORTHO05D000010 4.1e-07 58.2 80 41.2
Thecc.07G113400 Theobroma cacao HOM05D000021 ORTHO05D000010 4.1e-07 58.2 69 44.9
Cc02_g30790 Coffea canephora HOM05D000021 ORTHO05D000010 5.4e-07 57.8 86 38.4
Duzib036G0003 Durio zibethinus HOM05D000021 ORTHO05D000010 5.4e-07 57.8 97 41.2
Migut.G01081 Erythranthe guttata HOM05D000021 ORTHO05D000010 5.4e-07 57.8 89 50.6
Gohir.A01G054566 Gossypium hirsutum HOM05D000053 ORTHO05D000035 5.4e-07 57.8 75 45.3
Prupe.4G063300 Prunus persica HOM05D000021 ORTHO05D000010 5.4e-07 57.8 92 44.6
Cc04_g14440 Coffea canephora HOM05D000021 ORTHO05D000010 7.0e-07 57.4 81 42.0
TWI81G0119 Tripterygium wilfordii HOM05D000021 ORTHO05D000010 7.0e-07 57.4 95 42.1
Duzib268G0483 Durio zibethinus HOM05D000021 ORTHO05D000010 9.2e-07 57.0 96 38.5
Gorai.002G060700 Gossypium raimondii HOM05D000021 ORTHO05D000010 9.2e-07 57.0 84 42.9
Thecc.07G128800 Theobroma cacao HOM05D000021 ORTHO05D000010 9.2e-07 57.0 96 40.6
BolC3t21491H Brassica oleracea HOM05D000021 ORTHO05D000010 1.2e-06 56.6 88 44.3
Potri.011G140901 Populus trichocarpa HOM05D000021 ORTHO05D000010 1.2e-06 56.6 96 37.5
Cc02_g15270 Coffea canephora HOM05D000021 ORTHO05D000010 1.6e-06 56.2 93 40.9
Gohir.D01G042752 Gossypium hirsutum HOM05D000053 ORTHO05D000035 1.6e-06 56.2 69 44.9
Gorai.002G060800 Gossypium raimondii HOM05D000053 ORTHO05D000035 1.6e-06 56.2 69 44.9
MD10G1212700 Malus domestica HOM05D000021 ORTHO05D000010 1.6e-06 56.2 74 44.6
SGA_v2.0_scaffold118G32552 Striga asiatica HOM05D000021 ORTHO05D000010 1.6e-06 56.2 68 45.6
Thecc.07G111500 Theobroma cacao HOM05D000021 ORTHO05D000010 1.6e-06 56.2 80 41.2
CiPaw.01G207100 Carya illinoinensis HOM05D000021 ORTHO05D000010 2.0e-06 55.8 74 45.9
Cc09_g08660 Coffea canephora HOM05D000021 ORTHO05D000010 2.0e-06 55.8 77 45.5
SalBow7G1732 Salvia bowleyana HOM05D000021 ORTHO05D000010 2.0e-06 55.8 72 38.9
BcaC01g02391 Brassica carinata HOM05D000021 ORTHO05D000010 2.7e-06 55.5 64 53.1
C03p65810 Brassica napus HOM05D000021 ORTHO05D000010 2.7e-06 55.5 64 53.1
BolC3t18833H Brassica oleracea HOM05D000021 ORTHO05D000010 2.7e-06 55.5 64 53.1
Cc00_g30640 Coffea canephora HOM05D000021 ORTHO05D000010 2.7e-06 55.5 77 42.9
Cc05_g00250 Coffea canephora HOM05D000021 ORTHO05D000010 2.7e-06 55.5 74 44.6
Cc05_g01190 Coffea canephora HOM05D000021 ORTHO05D000010 2.7e-06 55.5 77 42.9
Duzib213G0584 Durio zibethinus HOM05D000021 ORTHO05D000010 2.7e-06 55.5 91 40.7
Gohir.D01G042730 Gossypium hirsutum HOM05D000053 ORTHO05D000035 2.7e-06 55.5 82 40.2
Gohir.D01G042736 Gossypium hirsutum HOM05D000053 ORTHO05D000035 2.7e-06 55.5 82 40.2
Gorai.002G060300 Gossypium raimondii HOM05D000053 ORTHO05D000035 2.7e-06 55.5 82 40.2
MD03G1138500 Malus domestica HOM05D000021 ORTHO05D000010 2.7e-06 55.5 74 45.9
Rhsim13G0188900 Rhododendron simsii HOM05D000021 ORTHO05D000010 2.7e-06 55.5 82 40.2
Thecc.07G181600 Theobroma cacao HOM05D000021 ORTHO05D000010 2.7e-06 55.5 95 38.9
Cc05_g01480 Coffea canephora HOM05D000021 ORTHO05D000010 3.5e-06 55.1 81 40.7
Cc09_g05600 Coffea canephora HOM05D000021 ORTHO05D000010 3.5e-06 55.1 86 44.2
Cc09_g08840 Coffea canephora HOM05D000021 ORTHO05D000010 3.5e-06 55.1 89 42.7
Migut.F01482 Erythranthe guttata HOM05D000021 ORTHO05D000010 3.5e-06 55.1 88 51.1
SalBow5G1166 Salvia bowleyana HOM05D000021 ORTHO05D000010 3.5e-06 55.1 73 45.2
SalBow7G2809 Salvia bowleyana HOM05D000021 ORTHO05D000010 3.5e-06 55.1 93 36.6
BcaB01g00947 Brassica carinata HOM05D000021 ORTHO05D000010 4.5e-06 54.7 81 46.9
BolC3t19421H Brassica oleracea HOM05D000021 ORTHO05D000010 4.5e-06 54.7 81 46.9
CAN.G411.82 Capsicum annuum HOM05D000021 ORTHO05D000010 4.5e-06 54.7 82 42.7
Cc05_g00270 Coffea canephora HOM05D000021 ORTHO05D000010 4.5e-06 54.7 75 45.3
Eucgr.G00456 Eucalyptus grandis HOM05D000021 ORTHO05D000010 4.5e-06 54.7 78 43.6
MD03G1180500 Malus domestica HOM05D000021 ORTHO05D000010 4.5e-06 54.7 74 44.6
MD05G1297800 Malus domestica HOM05D000021 ORTHO05D000010 4.5e-06 54.7 88 39.8
Peaxi162Scf00102g01243 Petunia axillaris HOM05D000021 ORTHO05D000010 4.5e-06 54.7 74 40.5
BcaC01g01850 Brassica carinata HOM05D000021 ORTHO05D000010 5.9e-06 54.3 72 48.6
Cc00_g30700 Coffea canephora HOM05D000021 ORTHO05D000010 5.9e-06 54.3 74 40.5
Cc02_g15310 Coffea canephora HOM05D000021 ORTHO05D000010 5.9e-06 54.3 74 40.5
Cc03_g09260 Coffea canephora HOM05D000021 ORTHO05D000010 5.9e-06 54.3 83 42.2
Cc09_g05730 Coffea canephora HOM05D000021 ORTHO05D000010 5.9e-06 54.3 74 44.6
Migut.H01442 Erythranthe guttata HOM05D000021 ORTHO05D000010 5.9e-06 54.3 90 44.4
Gohir.A01G054900 Gossypium hirsutum HOM05D000053 ORTHO05D000035 5.9e-06 54.3 95 40.0
MD03G1181900 Malus domestica HOM05D000021 ORTHO05D000010 5.9e-06 54.3 105 39.0
QL06p019291 Quercus lobata HOM05D000021 ORTHO05D000010 5.9e-06 54.3 69 43.5
Sabra05G0038700 Salix brachista HOM05D000021 ORTHO05D000010 5.9e-06 54.3 84 42.9
SalBow1G3345 Salvia bowleyana HOM05D000021 ORTHO05D000010 5.9e-06 54.3 74 47.3
SalBow6G1271 Salvia bowleyana HOM05D000021 ORTHO05D000010 5.9e-06 54.3 93 39.8
Sopen02g021410 Solanum pennellii HOM05D000021 ORTHO05D000010 5.9e-06 54.3 78 44.9
C03p91720 Brassica napus HOM05D000021 ORTHO05D000010 7.8e-06 53.9 87 42.5
Cc00_g14100 Coffea canephora HOM05D000021 ORTHO05D000010 7.8e-06 53.9 81 40.7
Cc00_g31760 Coffea canephora HOM05D000021 ORTHO05D000010 7.8e-06 53.9 81 39.5
Cc08_g10170 Coffea canephora HOM05D000021 ORTHO05D000010 7.8e-06 53.9 67 47.8
MD00G1192800 Malus domestica HOM05D000021 ORTHO05D000010 7.8e-06 53.9 74 43.2
Oeu052129.1 Olea europaea HOM05D000021 ORTHO05D000010 7.8e-06 53.9 74 44.6
Oeu056119.1 Olea europaea HOM05D000021 ORTHO05D000010 7.8e-06 53.9 71 45.1
Oeu057329.1 Olea europaea HOM05D000021 ORTHO05D000010 7.8e-06 53.9 77 42.9
Prupe.6G160500 Prunus persica HOM05D000021 ORTHO05D000010 7.8e-06 53.9 92 43.5
SalBow7G1252 Salvia bowleyana HOM05D000021 ORTHO05D000010 7.8e-06 53.9 80 43.8
Sopen02g021450 Solanum pennellii HOM05D000021 ORTHO05D000010 7.8e-06 53.9 75 44.0
Thecc.07G112800 Theobroma cacao HOM05D000021 ORTHO05D000010 7.8e-06 53.9 96 36.5
Thecc.07G128700 Theobroma cacao HOM05D000021 ORTHO05D000010 7.8e-06 53.9 96 36.5
TWI38G1067 Tripterygium wilfordii HOM05D000021 ORTHO05D000010 7.8e-06 53.9 66 48.5


User provided reference genes

Program Settings