Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_747.g21673 Utricularia gibba HOM05D004108 ORTHO05D004849 1.4e-43 179.5 111 100.0
SGA_v2.0_scaffold326G48731 Striga asiatica HOM05D004108 ORTHO05D004849 6.9e-14 80.9 113 42.5
Cc10_g02670 Coffea canephora HOM05D004108 ORTHO05D004849 9.0e-14 80.5 135 40.0
Psat5g012160 Pisum sativum HOM05D004108 ORTHO05D004849 1.4e-11 73.2 123 39.8
Lsat_1_v5_gn_4_117601 Lactuca sativa HOM05D004108 ORTHO05D004849 2.5e-11 72.4 122 33.6
AUR62003937 Chenopodium quinoa HOM05D004108 ORTHO05D004849 3.2e-11 72.0 132 35.6
AUR62014478 Chenopodium quinoa HOM05D004108 ORTHO05D004849 3.2e-11 72.0 132 35.6
PGSC0003DMG400003688 Solanum tuberosum HOM05D004108 ORTHO05D004849 3.2e-11 72.0 127 36.2
Migut.N00486 Erythranthe guttata HOM05D004108 ORTHO05D004849 4.2e-11 71.6 117 39.3
Medtr3g111970 Medicago truncatula HOM05D004108 ORTHO05D004849 4.2e-11 71.6 128 37.5
MSTRG.24284 Avicennia marina HOM05D004108 ORTHO05D004849 5.5e-11 71.2 127 39.4
Ca_15505_v3 Cicer arietinum L. HOM05D004108 ORTHO05D004849 7.2e-11 70.9 126 38.1
Gohir.A05G258800 Gossypium hirsutum HOM05D004108 ORTHO05D004849 7.2e-11 70.9 131 38.9
Thecc.08G029500 Theobroma cacao HOM05D004108 ORTHO05D004849 7.2e-11 70.9 137 35.8
MSTRG.22304 Avicennia marina HOM05D004108 ORTHO05D004849 9.4e-11 70.5 135 38.5
Gorai.009G272400 Gossypium raimondii HOM05D004108 ORTHO05D004849 9.4e-11 70.5 131 38.9
TPR.G12369 Trifolium pratense HOM05D004108 ORTHO05D004849 9.4e-11 70.5 138 34.8
arahy.Tifrunner.gnm1.ann1.9Q97AW Arachis hypogaea HOM05D004108 ORTHO05D004849 1.2e-10 70.1 114 55.3
arahy.Tifrunner.gnm1.ann1.FG8SZ8 Arachis hypogaea HOM05D004108 ORTHO05D004849 1.2e-10 70.1 114 57.0
Solyc04g080540.2 Solanum lycopersicum HOM05D004108 ORTHO05D004849 1.2e-10 70.1 127 34.6
HanXRQChr16g0501561 Helianthus annuus HOM05D004108 ORTHO05D004849 1.6e-10 69.7 118 33.1
Oeu007023.1 Olea europaea HOM05D004108 ORTHO05D004849 1.6e-10 69.7 136 35.3
Sc15g0007040 Simmondsia chinensis HOM05D004108 ORTHO05D004849 2.1e-10 69.3 120 38.3
EL10Ac1g00610 Beta vulgaris HOM05D004108 ORTHO05D004849 2.7e-10 68.9 132 34.8
Gohir.D05G260600 Gossypium hirsutum HOM05D004108 ORTHO05D004849 2.7e-10 68.9 131 38.2
Sp1g17400 Schrenkiella parvula HOM05D004108 ORTHO05D004849 2.7e-10 68.9 92 44.6
Sed0010517 Sechium edule HOM05D004108 ORTHO05D004849 2.7e-10 68.9 119 38.7
unitig_899.g15617 Utricularia gibba HOM05D004108 ORTHO05D004849 2.7e-10 68.9 101 41.6
Lalb_Chr08g0245901 Lupinus albus HOM05D004108 ORTHO05D004849 3.6e-10 68.6 133 35.3
Sopen04g034130 Solanum pennellii HOM05D004108 ORTHO05D004849 3.6e-10 68.6 127 35.4
MD08G1029700 Malus domestica HOM05D004108 ORTHO05D004849 4.6e-10 68.2 124 33.9
Sabra05G0176500 Salix brachista HOM05D004108 ORTHO05D004849 6.1e-10 67.8 135 35.6
COL.COLO4_26289 Corchorus olitorius HOM05D004108 ORTHO05D004849 7.9e-10 67.4 138 33.3
Duzib093G0346 Durio zibethinus HOM05D004108 ORTHO05D004849 7.9e-10 67.4 137 33.6
Eucgr.F01582 Eucalyptus grandis HOM05D004108 ORTHO05D004849 7.9e-10 67.4 123 35.8
HanXRQChr05g0156841 Helianthus annuus HOM05D004108 ORTHO05D004849 7.9e-10 67.4 138 34.1
CSS0043508 Camellia sinensis var. sinensis HOM05D004108 ORTHO05D004849 1.0e-09 67.0 140 34.3
CSS0044578 Camellia sinensis var. sinensis HOM05D004108 ORTHO05D004849 1.0e-09 67.0 140 34.3
Gohir.A05G192800 Gossypium hirsutum HOM05D004108 ORTHO05D004849 1.0e-09 67.0 137 34.3
TWI56G1092 Tripterygium wilfordii HOM05D004108 ORTHO05D004849 1.4e-09 66.6 141 31.9
PGR083G0993 Punica granatum HOM05D004108 ORTHO05D004849 1.8e-09 66.2 132 34.1
Hund26890 Selenicereus undatus HOM05D004108 ORTHO05D004849 1.8e-09 66.2 126 34.9
Hund29908 Selenicereus undatus HOM05D004108 ORTHO05D004849 1.8e-09 66.2 126 34.9
CDE06G1682 Ceratophyllum demersum HOM05D004108 ORTHO05D004849 2.3e-09 65.9 134 32.1
Nitab4.5_0002224g0100 Nicotiana tabacum HOM05D004108 ORTHO05D004849 2.3e-09 65.9 133 33.8
Carub.0001s1910 Capsella rubella HOM05D004108 ORTHO05D004849 3.0e-09 65.5 92 42.4
Duzib116G0345 Durio zibethinus HOM05D004108 ORTHO05D004849 3.0e-09 65.5 137 32.8
BcaC05g25839 Brassica carinata HOM05D004108 ORTHO05D004849 3.9e-09 65.1 92 43.5
A06p15710 Brassica napus HOM05D004108 ORTHO05D004849 3.9e-09 65.1 92 43.5
BolC5t30510H Brassica oleracea HOM05D004108 ORTHO05D004849 3.9e-09 65.1 92 43.5
ECA232G2533 Erigeron canadensis HOM05D004108 ORTHO05D004849 3.9e-09 65.1 124 33.9
Glyma.06G031000 Glycine max HOM05D004108 ORTHO05D004849 3.9e-09 65.1 134 34.3
Lj1g0012803 Lotus japonicus HOM05D004108 ORTHO05D004849 3.9e-09 65.1 132 34.8
Medtr1g022395 Medicago truncatula HOM05D004108 ORTHO05D004849 3.9e-09 65.1 133 33.8
Rhsim06G0031200 Rhododendron simsii HOM05D004108 ORTHO05D004849 3.9e-09 65.1 134 34.3
BcaB07g31980 Brassica carinata HOM05D004108 ORTHO05D004849 5.1e-09 64.7 92 43.5
C05p18030 Brassica napus HOM05D004108 ORTHO05D004849 5.1e-09 64.7 89 42.7
DCAR_019539 Daucus carota HOM05D001676 ORTHO05D001539 5.1e-09 64.7 134 35.1
Thhalv10009139m.g Eutrema salsugineum HOM05D004108 ORTHO05D004849 5.1e-09 64.7 117 38.5
Gohir.D05G196000 Gossypium hirsutum HOM05D004108 ORTHO05D004849 5.1e-09 64.7 137 33.6
Gorai.009G200900 Gossypium raimondii HOM05D004108 ORTHO05D004849 5.1e-09 64.7 137 33.6
CiPaw.15G080700 Carya illinoinensis HOM05D004108 ORTHO05D004849 6.7e-09 64.3 135 31.9
CARHR020100 Cardamine hirsuta HOM05D004108 ORTHO05D004849 8.8e-09 63.9 92 42.4
Gohir.D01G103300 Gossypium hirsutum HOM05D004108 ORTHO05D004849 8.8e-09 63.9 131 33.6
Gorai.002G127100 Gossypium raimondii HOM05D004108 ORTHO05D004849 8.8e-09 63.9 131 33.6
Potri.005G228600 Populus trichocarpa HOM05D004108 ORTHO05D004849 8.8e-09 63.9 136 33.8
BraA06t24680Z Brassica rapa HOM05D004108 ORTHO05D004849 1.1e-08 63.5 92 42.4
Glyma.04G030900 Glycine max HOM05D004108 ORTHO05D004849 1.1e-08 63.5 134 32.1
CsaV3_3G045320 Cucumis sativus L. HOM05D004108 ORTHO05D004849 1.5e-08 63.2 135 34.8
Glyma.06G031100 Glycine max HOM05D004108 ORTHO05D004849 1.5e-08 63.2 129 33.3
Lsat_1_v5_gn_5_27881 Lactuca sativa HOM05D004108 ORTHO05D004849 1.5e-08 63.2 137 32.8
Cpa.g.sc31.39 Carica papaya HOM05D004108 ORTHO05D004849 1.9e-08 62.8 106 34.0
MELO3C003817.2 Cucumis melo HOM05D004108 ORTHO05D004849 1.9e-08 62.8 135 34.8
Glyma.14G073200 Glycine max HOM05D004108 ORTHO05D004849 2.5e-08 62.4 134 32.8
Atru.chr13.446 Acer truncatum HOM05D004108 ORTHO05D004849 3.3e-08 62.0 136 32.4
Potri.002G034500 Populus trichocarpa HOM05D004108 ORTHO05D004849 3.3e-08 62.0 132 34.1
VMungo1309G0255 Vigna mungo HOM05D004108 ORTHO05D004849 3.3e-08 62.0 104 34.6
ATR0568G230 Amborella trichopoda HOM05D004108 ORTHO05D004849 4.3e-08 61.6 111 35.1
CsaV3_2G028830 Cucumis sativus L. HOM05D004108 ORTHO05D004849 4.3e-08 61.6 119 34.5
Gohir.A01G114900 Gossypium hirsutum HOM05D004108 ORTHO05D004849 5.7e-08 61.2 131 33.6
Manes.18G023000 Manihot esculenta HOM05D004108 ORTHO05D004849 5.7e-08 61.2 138 31.2
Sed0024175 Sechium edule HOM05D004108 ORTHO05D004849 5.7e-08 61.2 118 34.7
Sabra02G0027700 Salix brachista HOM05D004108 ORTHO05D004849 7.4e-08 60.8 109 35.8
Glyma.17G251800 Glycine max HOM05D004108 ORTHO05D004849 9.7e-08 60.5 136 32.4
AL1G32280 Arabidopsis lyrata HOM05D004108 ORTHO05D004849 1.3e-07 60.1 92 38.0
ECA246G2053 Erigeron canadensis HOM05D004108 ORTHO05D004849 1.3e-07 60.1 144 30.6
QL02p009008 Quercus lobata HOM05D004108 ORTHO05D004849 1.3e-07 60.1 134 32.1
TPR.G20143 Trifolium pratense HOM05D004108 ORTHO05D004849 1.3e-07 60.1 135 31.1
AT1G19530 Arabidopsis thaliana HOM05D004108 ORTHO05D004849 1.7e-07 59.7 115 34.8
Hma1.2p1_0203F.1_g086230 Hydrangea macrophylla HOM05D004108 ORTHO05D004849 1.7e-07 59.7 136 33.1
Os03g0826800 Oryza sativa ssp. japonica HOM05D004108 ORTHO05D004849 1.7e-07 59.7 139 31.7
CDE02G0765 Ceratophyllum demersum HOM05D004108 ORTHO05D004849 2.2e-07 59.3 134 29.9
Ca_13362_v3 Cicer arietinum L. HOM05D004108 ORTHO05D004849 2.2e-07 59.3 136 31.6
Lj5g0010725 Lotus japonicus HOM05D004108 ORTHO05D004849 2.2e-07 59.3 135 32.6
VMungo0647G0771 Vigna mungo HOM05D004108 ORTHO05D004849 2.2e-07 59.3 140 32.9
Rhsim07G0240700 Rhododendron simsii HOM05D004108 ORTHO05D004849 2.8e-07 58.9 129 32.6
RhsimUnG0051600 Rhododendron simsii HOM05D004108 ORTHO05D004849 2.8e-07 58.9 129 32.6
Psat6g008240 Pisum sativum HOM05D004108 ORTHO05D004849 3.7e-07 58.5 136 30.9
Prupe.1G377400 Prunus persica HOM05D004108 ORTHO05D004849 3.7e-07 58.5 124 32.3
CANSAT25G1850 Cannabis sativa HOM05D004108 ORTHO05D004849 4.8e-07 58.2 141 29.1
DCAR_020978 Daucus carota HOM05D004108 ORTHO05D004849 4.8e-07 58.2 106 37.7
Phvul.001G013200 Phaseolus vulgaris HOM05D004108 ORTHO05D004849 4.8e-07 58.2 135 30.4
Actinidia22531 Actinidia chinensis HOM05D004108 ORTHO05D004849 8.2e-07 57.4 135 32.6
CANSAT25G0460 Cannabis sativa HOM05D004108 ORTHO05D004849 8.2e-07 57.4 139 33.1
Ciclev10002766m.g Citrus clementina HOM05D004108 ORTHO05D004849 8.2e-07 57.4 138 29.7
ClCG08G014950 Citrullus lanatus HOM05D004108 ORTHO05D004849 1.1e-06 57.0 118 33.1
PSO675G8146 Papaver somniferum HOM05D004108 ORTHO05D004849 1.4e-06 56.6 135 30.4
GSVIVG01009730001 Vitis vinifera HOM05D004108 ORTHO05D004849 1.4e-06 56.6 135 29.6
Aqoxy5G01593 Aquilegia oxysepala HOM05D004108 ORTHO05D004849 1.8e-06 56.2 144 28.5
MELO3C010952.2 Cucumis melo HOM05D004108 ORTHO05D004849 1.8e-06 56.2 117 34.2
PSO541G2330 Papaver somniferum HOM05D004108 ORTHO05D004849 1.8e-06 56.2 115 32.2
HPP92_010562 Vanilla planifolia HOM05D004108 ORTHO05D004849 1.8e-06 56.2 113 33.6
Aqoxy3G01079 Aquilegia oxysepala HOM05D004108 ORTHO05D004849 2.4e-06 55.8 116 35.3
THA.LOC104811375 Tarenaya hassleriana HOM05D004108 ORTHO05D004849 3.1e-06 55.5 91 36.3
FAN15G0289 Fragaria x ananassa HOM05D004108 ORTHO05D004849 4.1e-06 55.1 149 30.2
FAN27G1128 Fragaria x ananassa HOM05D004108 ORTHO05D004849 4.1e-06 55.1 148 30.4
RcHm_v2.0_Chr6g0301271 Rosa chinensis HOM05D004108 ORTHO05D004849 4.1e-06 55.1 140 32.1
TAR381G0780 Trochodendron aralioides HOM05D004108 ORTHO05D004849 4.1e-06 55.1 116 31.0
Eucgr.F01583 Eucalyptus grandis HOM05D004108 ORTHO05D004849 5.3e-06 54.7 153 29.4
Mapoly0203s0009 Marchantia polymorpha HOM05D004108 ORTHO05D004849 5.3e-06 54.7 109 33.9
SEGI_02312 Sequoiadendron giganteum HOM05D004108 ORTHO05D004849 5.3e-06 54.7 142 30.3
HPP92_003110 Vanilla planifolia HOM05D004108 ORTHO05D004849 5.3e-06 54.7 130 30.0
Aqoxy3G01077 Aquilegia oxysepala HOM05D004108 ORTHO05D004849 6.9e-06 54.3 117 37.6


User provided reference genes

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